RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 H3BMM0 161 aa10.18□□□□□ -0.78
DDX54-210ENST00000552375 DEFB4AO15263 64 aa10.18□□□□□ -0.78
DDX54-210ENST00000552375 PXDC1Q5TGL8 231 aa10.18□□□□□ -0.78
DDX54-210ENST00000552375 Q8NAQ8 132 aa10.18□□□□□ -0.78
DDX54-210ENST00000552375 OR1L4Q8NGR5 311 aa10.18□□□□□ -0.78
DDX54-210ENST00000552375 C11orf45Q8TAV5 145 aa10.18□□□□□ -0.78
DDX54-210ENST00000552375 ATP5SQ99766 215 aa10.18□□□□□ -0.78
DDX54-210ENST00000552375 SAV1Q9H4B6 383 aaPredicted RBP10.18□□□□□ -0.78
DDX54-210ENST00000552375 MRPS12O15235 138 aaKnown RBP10.17□□□□□ -0.78
DDX54-210ENST00000552375 LY6G6CO95867 125 aa10.17□□□□□ -0.78
DDX54-210ENST00000552375 ZNF705DP0CH99 300 aaPredicted RBP10.17□□□□□ -0.78
DDX54-210ENST00000552375 ZNF705BP0CI00 300 aaPredicted RBP10.17□□□□□ -0.78
DDX54-210ENST00000552375 RPL29P47914 159 aaKnown RBP10.17□□□□□ -0.78
DDX54-210ENST00000552375 NANOS2P60321 138 aaKnown RBP10.17□□□□□ -0.78
DDX54-210ENST00000552375 SPATA31B1PQ5VZV4 182 aa10.17□□□□□ -0.78
DDX54-210ENST00000552375 FOXI2Q6ZQN5 318 aa10.17□□□□□ -0.78
DDX54-210ENST00000552375 S100A7AQ86SG5 101 aa10.17□□□□□ -0.78
DDX54-210ENST00000552375 ZNF738Q8NE65 137 aa10.17□□□□□ -0.78
DDX54-210ENST00000552375 LRRC20Q8TCA0 184 aa10.17□□□□□ -0.78
DDX54-210ENST00000552375 PFDN5Q99471 154 aa10.17□□□□□ -0.78
DDX54-210ENST00000552375 WDR61Q9GZS3 305 aaKnown RBP10.17□□□□□ -0.78
DDX54-210ENST00000552375 RPRMQ9NS64 109 aa10.17□□□□□ -0.78
DDX54-210ENST00000552375 XCL2Q9UBD3 114 aa10.17□□□□□ -0.78
DDX54-210ENST00000552375 ELOA3CA0A087WX78 387 aaPredicted RBP10.16□□□□□ -0.78
DDX54-210ENST00000552375 A0A087X0K7 114 aa10.16□□□□□ -0.78
DDX54-210ENST00000552375 IGHV4-28A0A0C4DH34 117 aa10.16□□□□□ -0.78
DDX54-210ENST00000552375 ZNF705EA8MWA4 302 aaPredicted RBP10.16□□□□□ -0.78
DDX54-210ENST00000552375 SLC17A3O00476 420 aa10.16□□□□□ -0.78
DDX54-210ENST00000552375 OXA1LQ15070 435 aa10.16□□□□□ -0.78
DDX54-210ENST00000552375 Q5BKY6 102 aa10.16□□□□□ -0.78
DDX54-210ENST00000552375 FAM78BQ5VT40 261 aa10.16□□□□□ -0.78
DDX54-210ENST00000552375 EBLN2Q6P2I7 272 aa10.16□□□□□ -0.78
DDX54-210ENST00000552375 BPIFA4PQ86YQ2 179 aa10.16□□□□□ -0.78
DDX54-210ENST00000552375 SLC35B3Q9H1N7 401 aa10.16□□□□□ -0.78
DDX54-210ENST00000552375 DNAJC4Q9NNZ3 241 aa10.16□□□□□ -0.78
DDX54-210ENST00000552375 RFNGQ9Y644 331 aa10.16□□□□□ -0.78
DDX54-210ENST00000552375 A0A0J9YX75 114 aa10.15□□□□□ -0.78
DDX54-210ENST00000552375 MPDU1O75352 247 aa10.15□□□□□ -0.78
DDX54-210ENST00000552375 MIFP14174 115 aa10.15□□□□□ -0.78
DDX54-210ENST00000552375 SAMD13Q5VXD3 122 aa10.15□□□□□ -0.78
DDX54-210ENST00000552375 ZNF709Q8N972 641 aa10.15□□□□□ -0.78
DDX54-210ENST00000552375 HRH4Q9H3N8 390 aa10.15□□□□□ -0.78
DDX54-210ENST00000552375 WFDC1Q9HC57 220 aa10.15□□□□□ -0.78
DDX54-210ENST00000552375 X6R8D5 127 aa10.15□□□□□ -0.78
DDX54-210ENST00000552375 IGHV3OR16-12A0A075B7B8 117 aa10.14□□□□□ -0.79
DDX54-210ENST00000552375 FXYD6-FXYD2A0A087WZ82 144 aa10.14□□□□□ -0.79
DDX54-210ENST00000552375 EIF3GO75821 320 aaKnown RBP eCLIP10.14□□□□□ -0.79
DDX54-210ENST00000552375 IFNA5P01569 189 aa10.14□□□□□ -0.79
DDX54-210ENST00000552375 GIPP09681 153 aaPredicted RBP10.14□□□□□ -0.79
DDX54-210ENST00000552375 PYYP10082 97 aa10.14□□□□□ -0.79
DDX54-210ENST00000552375 NUTF2P61970 127 aaKnown RBP10.14□□□□□ -0.79
DDX54-210ENST00000552375 HIST1H1AQ02539 215 aaPredicted RBP10.14□□□□□ -0.79
DDX54-210ENST00000552375 LCN15Q6UWW0 184 aa10.14□□□□□ -0.79
DDX54-210ENST00000552375 MIR17HGQ75NE6 70 aa10.14□□□□□ -0.79
DDX54-210ENST00000552375 CSNK1G2-AS1Q8NCQ2 148 aa10.14□□□□□ -0.79
DDX54-210ENST00000552375 C17orf112F2Z3M2 114 aa10.13□□□□□ -0.79
DDX54-210ENST00000552375 H3BQ15 152 aa10.13□□□□□ -0.79
DDX54-210ENST00000552375 RBMY1A1P0DJD3 496 aaKnown RBP10.13□□□□□ -0.79
DDX54-210ENST00000552375 RBMY1CP0DJD4 496 aa10.13□□□□□ -0.79
DDX54-210ENST00000552375 IGLC2P0DOY2 106 aa10.13□□□□□ -0.79
DDX54-210ENST00000552375 RBMY1FQ15415 496 aaKnown RBP10.13□□□□□ -0.79
DDX54-210ENST00000552375 FFAR4Q5NUL3 377 aa10.13□□□□□ -0.79
DDX54-210ENST00000552375 SCGB1C1Q8TD33 95 aa10.13□□□□□ -0.79
DDX54-210ENST00000552375 SLC25A2Q9BXI2 301 aa10.13□□□□□ -0.79
DDX54-210ENST00000552375 C1QTNF4Q9BXJ3 329 aa10.13□□□□□ -0.79
DDX54-210ENST00000552375 RNF24Q9Y225 148 aa10.13□□□□□ -0.79
DDX54-210ENST00000552375 ZNF705FA8MVS1 300 aaPredicted RBP10.12□□□□□ -0.79
DDX54-210ENST00000552375 CNN1P51911 297 aaKnown RBP10.12□□□□□ -0.79
DDX54-210ENST00000552375 PSG9Q00887 426 aa10.12□□□□□ -0.79
DDX54-210ENST00000552375 PSG3Q16557 428 aa10.12□□□□□ -0.79
DDX54-210ENST00000552375 CHAC2Q8WUX2 184 aa10.12□□□□□ -0.79
DDX54-210ENST00000552375 BLNKQ8WV28 456 aa10.12□□□□□ -0.79
DDX54-210ENST00000552375 SLC50A1Q9BRV3 221 aa10.12□□□□□ -0.79
DDX54-210ENST00000552375 ZNF331Q9NQX6 463 aaPredicted RBP10.12□□□□□ -0.79
DDX54-210ENST00000552375 KCNIP2Q9NS61 270 aa10.12□□□□□ -0.79
DDX54-210ENST00000552375 VPS13DQ5THJ4 4388 aa10.11□□□□□ -0.79
DDX54-210ENST00000552375 FRAS1Q86XX4 4008 aa10.11□□□□□ -0.79
DDX54-210ENST00000552375 SMLR1H3BR10 107 aa10.11□□□□□ -0.79
DDX54-210ENST00000552375 M0R2Z0 102 aa10.11□□□□□ -0.79
DDX54-210ENST00000552375 SPINK13Q1W4C9 94 aa10.11□□□□□ -0.79
DDX54-210ENST00000552375 OR2T35Q8NGX2 323 aa10.11□□□□□ -0.79
DDX54-210ENST00000552375 C2CD4CQ8TF44 421 aa10.11□□□□□ -0.79
DDX54-210ENST00000552375 RPUSD4Q96CM3 377 aaKnown RBP10.11□□□□□ -0.79
DDX54-210ENST00000552375 ZNF586Q9NXT0 402 aa10.11□□□□□ -0.79
DDX54-210ENST00000552375 DNAH6Q9C0G6 4158 aa10.11□□□□□ -0.79
DDX54-210ENST00000552375 C11orf94C9JXX5 98 aa10.1□□□□□ -0.79
DDX54-210ENST00000552375 PRAC2D3DTV9 90 aa10.1□□□□□ -0.79
DDX54-210ENST00000552375 OR10J4P0C629 311 aa10.1□□□□□ -0.79
DDX54-210ENST00000552375 CXCL2P19875 107 aa10.1□□□□□ -0.79
DDX54-210ENST00000552375 TCTAP57738 103 aa10.1□□□□□ -0.79
DDX54-210ENST00000552375 RHOBP62745 196 aa10.1□□□□□ -0.79
DDX54-210ENST00000552375 LGALS9CQ6DKI2 356 aa10.1□□□□□ -0.79
DDX54-210ENST00000552375 BAP18Q8IXM2 172 aa10.1□□□□□ -0.79
DDX54-210ENST00000552375 HSD17B11Q8NBQ5 300 aa10.1□□□□□ -0.79
DDX54-210ENST00000552375 AQP10Q96PS8 301 aa10.1□□□□□ -0.79
DDX54-210ENST00000552375 PARD6GQ9BYG4 376 aaPredicted RBP10.1□□□□□ -0.79
DDX54-210ENST00000552375 DNAH10Q8IVF4 4471 aa10.09□□□□□ -0.79
DDX54-210ENST00000552375 TRAV12-2A0A075B6T6 113 aa10.09□□□□□ -0.79
DDX54-210ENST00000552375 DUSP14O95147 198 aaKnown RBP10.09□□□□□ -0.79
DDX54-210ENST00000552375 RAB2AP61019 212 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 241 ms