RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 AMBPP02760 352 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 SNRPCP09234 159 aaKnown RBP9.28□□□□□ -0.92
NPAS3-209ENST00000551008 TCTAP57738 103 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 FGL1Q08830 312 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 ZNF846Q147U1 533 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 OPCMLQ14982 345 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 SPINK13Q1W4C9 94 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 ZNF546Q86UE3 836 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 IGF2BP2-AS1Q96M15 143 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 RNF126Q9BV68 326 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 DKK2Q9UBU2 259 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 WDR83OSQ9Y284 106 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 RFNGQ9Y644 331 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 DEFB131BA0A096LNP1 70 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 L7N2F9 121 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 GOSR2O14653 212 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 EMP1P54849 157 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 VAMP2P63027 116 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 MIC13Q5XKP0 118 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 LINC00305Q7Z4B0 112 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 NRARPQ7Z6K4 114 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 BAP18Q8IXM2 172 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 TMEM252Q8N6L7 170 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 S100ZQ8WXG8 99 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 ZNF331Q9NQX6 463 aaPredicted RBP9.27□□□□□ -0.93
NPAS3-209ENST00000551008 LYRM2Q9NU23 88 aaPredicted RBP9.27□□□□□ -0.93
NPAS3-209ENST00000551008 DNAH17Q9UFH2 4485 aa9.27□□□□□ -0.93
NPAS3-209ENST00000551008 LOC102723971A0A1B0GUV8 181 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 PLAC8L1A1L4L8 177 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 H3BQ15 152 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 H3BTX0 84 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 IGLC2P0DOY2 106 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 BCAP31P51572 246 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 CAV2P51636 162 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 PSG3Q16557 428 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 PXDC1Q5TGL8 231 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 FAM222AQ5U5X8 452 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 ZNF738Q8NE65 137 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 OR8A1Q8NGG7 326 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 GOLT1BQ9Y3E0 138 aa9.26□□□□□ -0.93
NPAS3-209ENST00000551008 YTHDF2Q9Y5A9 579 aaKnown RBP9.26□□□□□ -0.93
NPAS3-209ENST00000551008 TRAV5A0A0B4J249 113 aa9.25□□□□□ -0.93
NPAS3-209ENST00000551008 TMEM189A5PLL7 270 aa9.25□□□□□ -0.93
NPAS3-209ENST00000551008 PRAC2D3DTV9 90 aa9.25□□□□□ -0.93
NPAS3-209ENST00000551008 H0YIZ8 118 aa9.25□□□□□ -0.93
NPAS3-209ENST00000551008 DUSP14O95147 198 aaKnown RBP9.25□□□□□ -0.93
NPAS3-209ENST00000551008 SIX6O95475 246 aa9.25□□□□□ -0.93
NPAS3-209ENST00000551008 CAMLGP49069 296 aa9.25□□□□□ -0.93
NPAS3-209ENST00000551008 S100A10P60903 97 aa9.25□□□□□ -0.93
NPAS3-209ENST00000551008 KIR3DS1Q14943 382 aa9.25□□□□□ -0.93
NPAS3-209ENST00000551008 MZT2BQ6NZ67 158 aa9.25□□□□□ -0.93
NPAS3-209ENST00000551008 SAT2Q96F10 170 aaPredicted RBP9.25□□□□□ -0.93
NPAS3-209ENST00000551008 UQCC1Q9NVA1 299 aa9.25□□□□□ -0.93
NPAS3-209ENST00000551008 PTTG2Q9NZH5 202 aa9.25□□□□□ -0.93
NPAS3-209ENST00000551008 TRAV12-2A0A075B6T6 113 aa9.24□□□□□ -0.93
NPAS3-209ENST00000551008 UBE2L5PA0A1B0GUS4 154 aa9.24□□□□□ -0.93
NPAS3-209ENST00000551008 ZNF705GA8MUZ8 300 aaPredicted RBP9.24□□□□□ -0.93
NPAS3-209ENST00000551008 BOLA2-SMG1P6H3BVE0 249 aa9.24□□□□□ -0.93
NPAS3-209ENST00000551008 COX7A2P2O60397 106 aa9.24□□□□□ -0.93
NPAS3-209ENST00000551008 HBE1P02100 147 aa9.24□□□□□ -0.93
NPAS3-209ENST00000551008 SPART-AS1P0CW21 52 aa9.24□□□□□ -0.93
NPAS3-209ENST00000551008 AZU1P20160 251 aa9.24□□□□□ -0.93
NPAS3-209ENST00000551008 S100A7P31151 101 aa9.24□□□□□ -0.93
NPAS3-209ENST00000551008 SULT1A1P50225 295 aa9.24□□□□□ -0.93
NPAS3-209ENST00000551008 HIST1H1AQ02539 215 aaPredicted RBP9.24□□□□□ -0.93
NPAS3-209ENST00000551008 LCN15Q6UWW0 184 aa9.24□□□□□ -0.93
NPAS3-209ENST00000551008 RPUSD4Q96CM3 377 aaKnown RBP9.24□□□□□ -0.93
NPAS3-209ENST00000551008 PARD6GQ9BYG4 376 aaPredicted RBP9.24□□□□□ -0.93
NPAS3-209ENST00000551008 OR5AC2Q9NZP5 309 aa9.24□□□□□ -0.93
NPAS3-209ENST00000551008 CXCL2P19875 107 aa9.23□□□□□ -0.93
NPAS3-209ENST00000551008 RPL29P47914 159 aaKnown RBP9.23□□□□□ -0.93
NPAS3-209ENST00000551008 NHLH2Q02577 135 aa9.23□□□□□ -0.93
NPAS3-209ENST00000551008 RRN3P1Q2M238 152 aa9.23□□□□□ -0.93
NPAS3-209ENST00000551008 C10orf113Q5VZT2 155 aa9.23□□□□□ -0.93
NPAS3-209ENST00000551008 CHAC2Q8WUX2 184 aa9.23□□□□□ -0.93
NPAS3-209ENST00000551008 NIPSNAP3BQ9BS92 247 aa9.23□□□□□ -0.93
NPAS3-209ENST00000551008 SLC39A9Q9NUM3 307 aa9.23□□□□□ -0.93
NPAS3-209ENST00000551008 INSP01308 110 aa9.22□□□□□ -0.93
NPAS3-209ENST00000551008 H2BFSP57053 126 aa9.22□□□□□ -0.93
NPAS3-209ENST00000551008 OXA1LQ15070 435 aa9.22□□□□□ -0.93
NPAS3-209ENST00000551008 GCSAMLQ5JQS6 135 aa9.22□□□□□ -0.93
NPAS3-209ENST00000551008 BPIFA4PQ86YQ2 179 aa9.22□□□□□ -0.93
NPAS3-209ENST00000551008 ENKURQ8TC29 256 aa9.22□□□□□ -0.93
NPAS3-209ENST00000551008 SLC50A1Q9BRV3 221 aa9.22□□□□□ -0.93
NPAS3-209ENST00000551008 DNAJC4Q9NNZ3 241 aa9.22□□□□□ -0.93
NPAS3-209ENST00000551008 ZNF586Q9NXT0 402 aa9.22□□□□□ -0.93
NPAS3-209ENST00000551008 PXMP4Q9Y6I8 212 aa9.22□□□□□ -0.93
NPAS3-209ENST00000551008 PVALBP20472 110 aaPredicted RBP9.21□□□□□ -0.94
NPAS3-209ENST00000551008 FGF7P21781 194 aa9.21□□□□□ -0.94
NPAS3-209ENST00000551008 S100A11P31949 105 aa9.21□□□□□ -0.94
NPAS3-209ENST00000551008 B2MP61769 119 aa9.21□□□□□ -0.94
NPAS3-209ENST00000551008 BAXQ07812 192 aa9.21□□□□□ -0.94
NPAS3-209ENST00000551008 MARVELD1Q9BSK0 173 aa9.21□□□□□ -0.94
NPAS3-209ENST00000551008 GPN1Q9HCN4 374 aaPredicted RBP9.21□□□□□ -0.94
NPAS3-209ENST00000551008 PKHD1P08F94 4074 aa9.21□□□□□ -0.94
NPAS3-209ENST00000551008 INMT-MINDY4F8WBC2 141 aa9.2□□□□□ -0.94
NPAS3-209ENST00000551008 NDUFB4O95168 129 aa9.2□□□□□ -0.94
NPAS3-209ENST00000551008 TSPOP30536 169 aa9.2□□□□□ -0.94
NPAS3-209ENST00000551008 S100A7AQ86SG5 101 aa9.2□□□□□ -0.94
NPAS3-209ENST00000551008 FAM167A-AS1Q96KT0 104 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms