RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 LINC00305Q7Z4B0 112 aa7.75□□□□□ -1.17
VTI1BP3-201ENST00000550220 RNF182Q8N6D2 247 aa7.75□□□□□ -1.17
VTI1BP3-201ENST00000550220 ZNF431Q8TF32 576 aaPredicted RBP7.75□□□□□ -1.17
VTI1BP3-201ENST00000550220 UHRF2Q96PU4 802 aa7.75□□□□□ -1.17
VTI1BP3-201ENST00000550220 SLC50A1Q9BRV3 221 aa7.75□□□□□ -1.17
VTI1BP3-201ENST00000550220 CCDC32Q9BV29 185 aa7.75□□□□□ -1.17
VTI1BP3-201ENST00000550220 RCL1Q9Y2P8 373 aaKnown RBP7.75□□□□□ -1.17
VTI1BP3-201ENST00000550220 C5orf51A6NDU8 294 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 FAM25EA8MYX2 175 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 PLA2G10O15496 165 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 CRXO43186 299 aaPredicted RBP7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 COX7A2P2O60397 106 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 BCAP31P51572 246 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 FAM3BP58499 235 aaPredicted RBP7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 TAS2R60P59551 318 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 HIST1H1AQ02539 215 aaPredicted RBP7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 SLC38A11Q08AI6 406 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 SPINK13Q1W4C9 94 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 LGALS9BQ3B8N2 356 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 IGFL4Q6B9Z1 124 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 UBE2DNLQ8IWF7 75 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 C15orf53Q8NAA6 179 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 RPUSD4Q96CM3 377 aaKnown RBP7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 C2orf50Q96LR7 162 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 LINC01587Q99440 93 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 DNAJC4Q9NNZ3 241 aa7.74□□□□□ -1.17
VTI1BP3-201ENST00000550220 M0R2Z0 102 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 CCNKO75909 580 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 S100A11P31949 105 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 CDKN1BP46527 198 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 CAMLGP49069 296 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 CAV2P51636 162 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 HBG1P69891 147 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 HBG2P69892 147 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 GUK1Q16774 197 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 C10orf113Q5VZT2 155 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 MZT2BQ6NZ67 158 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 PATE2Q6UY27 113 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 ZNF493Q6ZR52 646 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 C12orf45Q8N5I9 185 aaPredicted RBP7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 OR1L4Q8NGR5 311 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 PFDN5Q99471 154 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 C20orf144Q9BQM9 153 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 ZNF331Q9NQX6 463 aaPredicted RBP7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 NUDT15Q9NV35 164 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 LSM5Q9Y4Y9 91 aaKnown RBP7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 PXMP4Q9Y6I8 212 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 FRAS1Q86XX4 4008 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 DNAH6Q9C0G6 4158 aa7.73□□□□□ -1.17
VTI1BP3-201ENST00000550220 TRAV6A0A075B6T7 132 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 FAM240BA0A1B0GVZ2 78 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 ZNF705GA8MUZ8 300 aaPredicted RBP7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 MRPS12O15235 138 aaKnown RBP7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 H2AFB2P0C5Z0 115 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 HTN3P15516 51 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 ATP6V1FQ16864 119 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 SOHLH1Q5JUK2 328 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 STX12Q86Y82 276 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 OR10J6PQ8NGY7 276 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 CHAC2Q8WUX2 184 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 TMEM37Q8WXS4 190 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 C16orf74Q96GX8 76 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 MGST2Q99735 147 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 UQCC1Q9NVA1 299 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 VPS13DQ5THJ4 4388 aa7.72□□□□□ -1.17
VTI1BP3-201ENST00000550220 CBY3A6NI87 242 aa7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 H7BYZ3 331 aa7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 RPL29P47914 159 aaKnown RBP7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 SULT1A1P50225 295 aa7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 ARL16Q0P5N6 197 aa7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 BAP18Q8IXM2 172 aa7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 S100ZQ8WXG8 99 aa7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 LYRM2Q9NU23 88 aaPredicted RBP7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 PLA2G2EQ9NZK7 142 aa7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 WDR83OSQ9Y284 106 aa7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 TIMM8BQ9Y5J9 83 aaPredicted RBP7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 DNAH10Q8IVF4 4471 aa7.71□□□□□ -1.18
VTI1BP3-201ENST00000550220 TRAV12-2A0A075B6T6 113 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 CCSO14618 274 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 ZNF253O75346 499 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 MPDU1O75352 247 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 CST7O76096 145 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 ATP5G1P05496 136 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 DEFB130BP0DP73 79 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 DEFB130AP0DP74 79 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 ATP5G3P48201 142 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 VWC2Q2TAL6 325 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 TMEM88Q6PEY1 159 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 NRARPQ7Z6K4 114 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 CCDC28AQ8IWP9 274 aa7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 GPN1Q9HCN4 374 aaPredicted RBP7.7□□□□□ -1.18
VTI1BP3-201ENST00000550220 FAM24AA6NFZ4 105 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 F5H768 121 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 RLN2P04090 185 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 IGLC2P0DOY2 106 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 S100A10P60903 97 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 IL15RAQ13261 267 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 OPCMLQ14982 345 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 TMEM252Q8N6L7 170 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 TMEM263Q8WUH6 116 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms