RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 H0YIZ8 118 aa12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 MRPS12O15235 138 aaKnown RBP12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 RBMY1A1P0DJD3 496 aaKnown RBP12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 RBMY1CP0DJD4 496 aa12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 FXYD7P58549 80 aa12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 NHLH2Q02577 135 aa12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 RBMY1FQ15415 496 aaKnown RBP12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 MORN5Q5VZ52 161 aa12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 IGFL4Q6B9Z1 124 aa12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 PHLDA1Q8WV24 401 aaPredicted RBP12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 SLC35B3Q9H1N7 401 aa12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 KLK5Q9Y337 293 aaPredicted RBP12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 PXMP4Q9Y6I8 212 aa12.48□□□□□ -0.41
CHMP1A-208ENST00000550102 DUSP14O95147 198 aaKnown RBP12.47□□□□□ -0.41
CHMP1A-208ENST00000550102 CXCL3P19876 107 aa12.47□□□□□ -0.41
CHMP1A-208ENST00000550102 NANOS2P60321 138 aaKnown RBP12.47□□□□□ -0.41
CHMP1A-208ENST00000550102 CLINT1Q14677 625 aa12.47□□□□□ -0.41
CHMP1A-208ENST00000550102 THAP6Q8TBB0 222 aa12.47□□□□□ -0.41
CHMP1A-208ENST00000550102 SLC50A1Q9BRV3 221 aa12.47□□□□□ -0.41
CHMP1A-208ENST00000550102 NPCDR1Q9BY65 106 aa12.47□□□□□ -0.41
CHMP1A-208ENST00000550102 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
CHMP1A-208ENST00000550102 KCNIP2Q9NS61 270 aa12.47□□□□□ -0.41
CHMP1A-208ENST00000550102 ZNF705FA8MVS1 300 aaPredicted RBP12.46□□□□□ -0.41
CHMP1A-208ENST00000550102 MPC2O95563 127 aa12.46□□□□□ -0.41
CHMP1A-208ENST00000550102 ZNF705DP0CH99 300 aaPredicted RBP12.46□□□□□ -0.41
CHMP1A-208ENST00000550102 ZNF705BP0CI00 300 aaPredicted RBP12.46□□□□□ -0.41
CHMP1A-208ENST00000550102 CNN1P51911 297 aaKnown RBP12.46□□□□□ -0.41
CHMP1A-208ENST00000550102 ZNF705AQ6ZN79 300 aaPredicted RBP12.46□□□□□ -0.41
CHMP1A-208ENST00000550102 ALG5Q9Y673 324 aa12.46□□□□□ -0.41
CHMP1A-208ENST00000550102 ALMS1Q8TCU4 4167 aa12.45□□□□□ -0.42
CHMP1A-208ENST00000550102 AMBPP02760 352 aa12.45□□□□□ -0.42
CHMP1A-208ENST00000550102 IGLC2P0DOY2 106 aa12.45□□□□□ -0.42
CHMP1A-208ENST00000550102 PSG3Q16557 428 aa12.45□□□□□ -0.42
CHMP1A-208ENST00000550102 AMTNQ6UX39 209 aa12.45□□□□□ -0.42
CHMP1A-208ENST00000550102 NEU1Q99519 415 aa12.45□□□□□ -0.42
CHMP1A-208ENST00000550102 ZNF331Q9NQX6 463 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-208ENST00000550102 GOLT1BQ9Y3E0 138 aa12.45□□□□□ -0.42
CHMP1A-208ENST00000550102 IGHV3OR16-12A0A075B7B8 117 aa12.44□□□□□ -0.42
CHMP1A-208ENST00000550102 HLA-DMBP28068 263 aa12.44□□□□□ -0.42
CHMP1A-208ENST00000550102 GUK1Q16774 197 aa12.44□□□□□ -0.42
CHMP1A-208ENST00000550102 OR11H7Q8NGC8 314 aa12.44□□□□□ -0.42
CHMP1A-208ENST00000550102 ATP5SQ99766 215 aa12.44□□□□□ -0.42
CHMP1A-208ENST00000550102 MBD2Q9UBB5 411 aa12.44□□□□□ -0.42
CHMP1A-208ENST00000550102 HSPB11Q9Y547 144 aa12.44□□□□□ -0.42
CHMP1A-208ENST00000550102 SMIM9A6NGZ8 99 aa12.43□□□□□ -0.42
CHMP1A-208ENST00000550102 SLC17A3O00476 420 aa12.43□□□□□ -0.42
CHMP1A-208ENST00000550102 HIST1H1AQ02539 215 aaPredicted RBP12.43□□□□□ -0.42
CHMP1A-208ENST00000550102 OR8A1Q8NGG7 326 aa12.43□□□□□ -0.42
CHMP1A-208ENST00000550102 RPUSD4Q96CM3 377 aaKnown RBP12.43□□□□□ -0.42
CHMP1A-208ENST00000550102 RNF126Q9BV68 326 aa12.43□□□□□ -0.42
CHMP1A-208ENST00000550102 WDR61Q9GZS3 305 aaKnown RBP12.43□□□□□ -0.42
CHMP1A-208ENST00000550102 RYR2Q92736 4967 aa12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 TRAV5A0A0B4J249 113 aa12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 TMEM189A5PLL7 270 aa12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 H3BQ15 152 aa12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 H3BTX0 84 aa12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 BOLA2-SMG1P6H3BVE0 249 aa12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 INSP01308 110 aa12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 SNRPCP09234 159 aaKnown RBP12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 SPINK13Q1W4C9 94 aa12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 LINC00476Q8WZB0 136 aa12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 IGF2BP2-AS1Q96M15 143 aa12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 RFNGQ9Y644 331 aa12.42□□□□□ -0.42
CHMP1A-208ENST00000550102 SACSQ9NZJ4 4579 aa12.41□□□□□ -0.42
CHMP1A-208ENST00000550102 C11orf94C9JXX5 98 aa12.41□□□□□ -0.42
CHMP1A-208ENST00000550102 M0R2Z0 102 aa12.41□□□□□ -0.42
CHMP1A-208ENST00000550102 RPL12P30050 165 aaKnown RBP12.41□□□□□ -0.42
CHMP1A-208ENST00000550102 RHOBP62745 196 aa12.41□□□□□ -0.42
CHMP1A-208ENST00000550102 TMEM208Q9BTX3 173 aa12.41□□□□□ -0.42
CHMP1A-208ENST00000550102 MED28Q9H204 178 aa12.41□□□□□ -0.42
CHMP1A-208ENST00000550102 PPP1R14DQ9NXH3 145 aa12.41□□□□□ -0.42
CHMP1A-208ENST00000550102 CELA1Q9UNI1 258 aa12.41□□□□□ -0.42
CHMP1A-208ENST00000550102 C17orf112F2Z3M2 114 aa12.4□□□□□ -0.42
CHMP1A-208ENST00000550102 ZNF253O75346 499 aa12.4□□□□□ -0.42
CHMP1A-208ENST00000550102 HBE1P02100 147 aa12.4□□□□□ -0.42
CHMP1A-208ENST00000550102 GCSAMLQ5JQS6 135 aa12.4□□□□□ -0.42
CHMP1A-208ENST00000550102 C1orf158Q8N1D5 194 aa12.4□□□□□ -0.42
CHMP1A-208ENST00000550102 TMEM14CQ9P0S9 112 aa12.4□□□□□ -0.42
CHMP1A-208ENST00000550102 Q6ZTC4 211 aa12.39□□□□□ -0.43
CHMP1A-208ENST00000550102 BAP18Q8IXM2 172 aa12.39□□□□□ -0.43
CHMP1A-208ENST00000550102 OR10J6PQ8NGY7 276 aa12.39□□□□□ -0.43
CHMP1A-208ENST00000550102 C2CD4CQ8TF44 421 aa12.39□□□□□ -0.43
CHMP1A-208ENST00000550102 SAT2Q96F10 170 aaPredicted RBP12.39□□□□□ -0.43
CHMP1A-208ENST00000550102 ZNF586Q9NXT0 402 aa12.39□□□□□ -0.43
CHMP1A-208ENST00000550102 TRBV19A0A075B6N1 114 aa12.38□□□□□ -0.43
CHMP1A-208ENST00000550102 TEX48A0A1B0GUV7 120 aa12.38□□□□□ -0.43
CHMP1A-208ENST00000550102 IFNA5P01569 189 aa12.38□□□□□ -0.43
CHMP1A-208ENST00000550102 EMP1P54849 157 aa12.38□□□□□ -0.43
CHMP1A-208ENST00000550102 RRN3P1Q2M238 152 aa12.38□□□□□ -0.43
CHMP1A-208ENST00000550102 MRPL32Q9BYC8 188 aaKnown RBP12.38□□□□□ -0.43
CHMP1A-208ENST00000550102 SMIM3Q9BZL3 60 aa12.38□□□□□ -0.43
CHMP1A-208ENST00000550102 DNAH1Q9P2D7 4330 aa12.38□□□□□ -0.43
CHMP1A-208ENST00000550102 TRAV10A0A0B4J240 114 aa12.37□□□□□ -0.43
CHMP1A-208ENST00000550102 LOC102723971A0A1B0GUV8 181 aa12.37□□□□□ -0.43
CHMP1A-208ENST00000550102 CRXO43186 299 aaPredicted RBP12.37□□□□□ -0.43
CHMP1A-208ENST00000550102 PYYP10082 97 aa12.37□□□□□ -0.43
CHMP1A-208ENST00000550102 PRB4P10163 310 aaPredicted RBP12.37□□□□□ -0.43
CHMP1A-208ENST00000550102 HIST1H1EP10412 219 aaKnown RBP12.37□□□□□ -0.43
CHMP1A-208ENST00000550102 PDE6HQ13956 83 aa12.37□□□□□ -0.43
CHMP1A-208ENST00000550102 FCN2Q15485 313 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms