RNA–Protein interactions for RNA: ENST00000549554.1

TUBA1C-205, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-205ENST00000549554 NHLH2Q02577 135 aa14.39□□□□□ -0.11
TUBA1C-205ENST00000549554 RNF182Q8N6D2 247 aa14.39□□□□□ -0.11
TUBA1C-205ENST00000549554 PHLDA1Q8WV24 401 aaPredicted RBP14.39□□□□□ -0.11
TUBA1C-205ENST00000549554 PXMP4Q9Y6I8 212 aa14.39□□□□□ -0.11
TUBA1C-205ENST00000549554 MRPS12O15235 138 aaKnown RBP14.38□□□□□ -0.11
TUBA1C-205ENST00000549554 NANOS2P60321 138 aaKnown RBP14.38□□□□□ -0.11
TUBA1C-205ENST00000549554 IGFL4Q6B9Z1 124 aa14.38□□□□□ -0.11
TUBA1C-205ENST00000549554 ZNF709Q8N972 641 aa14.38□□□□□ -0.11
TUBA1C-205ENST00000549554 SLC35B3Q9H1N7 401 aa14.38□□□□□ -0.11
TUBA1C-205ENST00000549554 HRH4Q9H3N8 390 aa14.38□□□□□ -0.11
TUBA1C-205ENST00000549554 KCNIP2Q9NS61 270 aa14.38□□□□□ -0.11
TUBA1C-205ENST00000549554 GOLT1BQ9Y3E0 138 aa14.38□□□□□ -0.11
TUBA1C-205ENST00000549554 A8MTW9 85 aa14.37□□□□□ -0.11
TUBA1C-205ENST00000549554 H0YIZ8 118 aa14.37□□□□□ -0.11
TUBA1C-205ENST00000549554 MPC2O95563 127 aa14.37□□□□□ -0.11
TUBA1C-205ENST00000549554 AMBPP02760 352 aa14.37□□□□□ -0.11
TUBA1C-205ENST00000549554 RBMY1A1P0DJD3 496 aaKnown RBP14.37□□□□□ -0.11
TUBA1C-205ENST00000549554 RBMY1CP0DJD4 496 aa14.37□□□□□ -0.11
TUBA1C-205ENST00000549554 CXCL3P19876 107 aa14.37□□□□□ -0.11
TUBA1C-205ENST00000549554 RBMY1FQ15415 496 aaKnown RBP14.37□□□□□ -0.11
TUBA1C-205ENST00000549554 NPCDR1Q9BY65 106 aa14.37□□□□□ -0.11
TUBA1C-205ENST00000549554 SMIM9A6NGZ8 99 aa14.36□□□□□ -0.11
TUBA1C-205ENST00000549554 CNN1P51911 297 aaKnown RBP14.36□□□□□ -0.11
TUBA1C-205ENST00000549554 CLINT1Q14677 625 aa14.36□□□□□ -0.11
TUBA1C-205ENST00000549554 PSG3Q16557 428 aa14.36□□□□□ -0.11
TUBA1C-205ENST00000549554 ZNF705AQ6ZN79 300 aaPredicted RBP14.36□□□□□ -0.11
TUBA1C-205ENST00000549554 NEU1Q99519 415 aa14.36□□□□□ -0.11
TUBA1C-205ENST00000549554 ALG5Q9Y673 324 aa14.36□□□□□ -0.11
TUBA1C-205ENST00000549554 IGHV3OR16-12A0A075B7B8 117 aa14.35□□□□□ -0.11
TUBA1C-205ENST00000549554 GUK1Q16774 197 aa14.35□□□□□ -0.11
TUBA1C-205ENST00000549554 MORN5Q5VZ52 161 aa14.35□□□□□ -0.11
TUBA1C-205ENST00000549554 THAP6Q8TBB0 222 aa14.35□□□□□ -0.11
TUBA1C-205ENST00000549554 ZNF331Q9NQX6 463 aaPredicted RBP14.35□□□□□ -0.11
TUBA1C-205ENST00000549554 ZNF705FA8MVS1 300 aaPredicted RBP14.34□□□□□ -0.11
TUBA1C-205ENST00000549554 ZNF705DP0CH99 300 aaPredicted RBP14.34□□□□□ -0.11
TUBA1C-205ENST00000549554 ZNF705BP0CI00 300 aaPredicted RBP14.34□□□□□ -0.11
TUBA1C-205ENST00000549554 OR8A1Q8NGG7 326 aa14.34□□□□□ -0.11
TUBA1C-205ENST00000549554 PPP1R14DQ9NXH3 145 aa14.34□□□□□ -0.11
TUBA1C-205ENST00000549554 TMEM189A5PLL7 270 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 C11orf94C9JXX5 98 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 C17orf112F2Z3M2 114 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 IGLC2P0DOY2 106 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 HLA-DMBP28068 263 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 HIST1H1AQ02539 215 aaPredicted RBP14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 AMTNQ6UX39 209 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 OR11H7Q8NGC8 314 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 RPUSD4Q96CM3 377 aaKnown RBP14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 IGF2BP2-AS1Q96M15 143 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 ATP5SQ99766 215 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 RNF126Q9BV68 326 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 WDR61Q9GZS3 305 aaKnown RBP14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 HSPB11Q9Y547 144 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 RFNGQ9Y644 331 aa14.33□□□□□ -0.12
TUBA1C-205ENST00000549554 TRAV5A0A0B4J249 113 aa14.32□□□□□ -0.12
TUBA1C-205ENST00000549554 RHOBP62745 196 aa14.32□□□□□ -0.12
TUBA1C-205ENST00000549554 TMEM208Q9BTX3 173 aa14.32□□□□□ -0.12
TUBA1C-205ENST00000549554 MBD2Q9UBB5 411 aa14.32□□□□□ -0.12
TUBA1C-205ENST00000549554 RYR3Q15413 4870 aa14.31□□□□□ -0.12
TUBA1C-205ENST00000549554 BOLA2-SMG1P6H3BVE0 249 aa14.31□□□□□ -0.12
TUBA1C-205ENST00000549554 INSP01308 110 aa14.31□□□□□ -0.12
TUBA1C-205ENST00000549554 HBE1P02100 147 aa14.31□□□□□ -0.12
TUBA1C-205ENST00000549554 SNRPCP09234 159 aaKnown RBP14.31□□□□□ -0.12
TUBA1C-205ENST00000549554 RPL12P30050 165 aaKnown RBP14.31□□□□□ -0.12
TUBA1C-205ENST00000549554 SPINK13Q1W4C9 94 aa14.31□□□□□ -0.12
TUBA1C-205ENST00000549554 C2CD4CQ8TF44 421 aa14.31□□□□□ -0.12
TUBA1C-205ENST00000549554 MED28Q9H204 178 aa14.31□□□□□ -0.12
TUBA1C-205ENST00000549554 LYSTQ99698 3801 aa14.3□□□□□ -0.12
TUBA1C-205ENST00000549554 H3BQ15 152 aa14.3□□□□□ -0.12
TUBA1C-205ENST00000549554 H3BTX0 84 aa14.3□□□□□ -0.12
TUBA1C-205ENST00000549554 ZNF253O75346 499 aa14.3□□□□□ -0.12
TUBA1C-205ENST00000549554 IFNA5P01569 189 aa14.3□□□□□ -0.12
TUBA1C-205ENST00000549554 LINC00476Q8WZB0 136 aa14.3□□□□□ -0.12
TUBA1C-205ENST00000549554 TMEM14CQ9P0S9 112 aa14.3□□□□□ -0.12
TUBA1C-205ENST00000549554 TEX48A0A1B0GUV7 120 aa14.29□□□□□ -0.12
TUBA1C-205ENST00000549554 M0R2Z0 102 aa14.29□□□□□ -0.12
TUBA1C-205ENST00000549554 SLC17A3O00476 420 aa14.29□□□□□ -0.12
TUBA1C-205ENST00000549554 RRN3P1Q2M238 152 aa14.29□□□□□ -0.12
TUBA1C-205ENST00000549554 C1orf158Q8N1D5 194 aa14.29□□□□□ -0.12
TUBA1C-205ENST00000549554 OR10J6PQ8NGY7 276 aa14.29□□□□□ -0.12
TUBA1C-205ENST00000549554 SCGB1C1Q8TD33 95 aa14.29□□□□□ -0.12
TUBA1C-205ENST00000549554 SAT2Q96F10 170 aaPredicted RBP14.29□□□□□ -0.12
TUBA1C-205ENST00000549554 MRPL32Q9BYC8 188 aaKnown RBP14.29□□□□□ -0.12
TUBA1C-205ENST00000549554 TRAV10A0A0B4J240 114 aa14.28□□□□□ -0.12
TUBA1C-205ENST00000549554 HIST1H1EP10412 219 aaKnown RBP14.28□□□□□ -0.12
TUBA1C-205ENST00000549554 TCTAP57738 103 aa14.28□□□□□ -0.12
TUBA1C-205ENST00000549554 ZNF586Q9NXT0 402 aa14.28□□□□□ -0.12
TUBA1C-205ENST00000549554 CELA1Q9UNI1 258 aa14.28□□□□□ -0.12
TUBA1C-205ENST00000549554 SACSQ9NZJ4 4579 aa14.27□□□□□ -0.12
TUBA1C-205ENST00000549554 LY6G6CO95867 125 aa14.27□□□□□ -0.13
TUBA1C-205ENST00000549554 SPART-AS1P0CW21 52 aa14.27□□□□□ -0.13
TUBA1C-205ENST00000549554 EMP1P54849 157 aa14.27□□□□□ -0.13
TUBA1C-205ENST00000549554 PDE6HQ13956 83 aa14.27□□□□□ -0.13
TUBA1C-205ENST00000549554 GCSAMLQ5JQS6 135 aa14.27□□□□□ -0.13
TUBA1C-205ENST00000549554 Q6ZTC4 211 aa14.27□□□□□ -0.13
TUBA1C-205ENST00000549554 SMIM3Q9BZL3 60 aa14.27□□□□□ -0.13
TUBA1C-205ENST00000549554 TIMM9Q9Y5J7 89 aa14.27□□□□□ -0.13
TUBA1C-205ENST00000549554 TRBV19A0A075B6N1 114 aa14.26□□□□□ -0.13
TUBA1C-205ENST00000549554 LOC102723971A0A1B0GUV8 181 aa14.26□□□□□ -0.13
TUBA1C-205ENST00000549554 FCN2Q15485 313 aa14.26□□□□□ -0.13
TUBA1C-205ENST00000549554 BAP18Q8IXM2 172 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms