RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 INAFM2P0DMQ5 153 aa8.66□□□□□ -1.02
DDX54-206ENST00000549271 MEOX2P50222 304 aa8.66□□□□□ -1.02
DDX54-206ENST00000549271 SLC38A11Q08AI6 406 aa8.66□□□□□ -1.02
DDX54-206ENST00000549271 RAB32Q13637 225 aa8.66□□□□□ -1.02
DDX54-206ENST00000549271 NRARPQ7Z6K4 114 aa8.66□□□□□ -1.02
DDX54-206ENST00000549271 UBE2DNLQ8IWF7 75 aa8.66□□□□□ -1.02
DDX54-206ENST00000549271 GPR82Q96P67 336 aa8.66□□□□□ -1.02
DDX54-206ENST00000549271 UHRF2Q96PU4 802 aa8.66□□□□□ -1.02
DDX54-206ENST00000549271 ARL6Q9H0F7 186 aa8.66□□□□□ -1.02
DDX54-206ENST00000549271 FAT1Q14517 4588 aa8.66□□□□□ -1.02
DDX54-206ENST00000549271 TRAV8-2A0A0B4J237 113 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 A0A0J9YX75 114 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 TEX48A0A1B0GUV7 120 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 EPM2AB3EWF7 344 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 AGPAT2O15120 278 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 MRPS12O15235 138 aaKnown RBP8.65□□□□□ -1.02
DDX54-206ENST00000549271 CST7O76096 145 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 IGKV3-20P01619 116 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 OR5G3P0C626 314 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 BCAP31P51572 246 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 RAP2BP61225 183 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 RNF212Q495C1 297 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 SAMD13Q5VXD3 122 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 SPATA31B1PQ5VZV4 182 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 IGFL4Q6B9Z1 124 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 ZNF767PQ75MW2 155 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 ZNF709Q8N972 641 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 ENKURQ8TC29 256 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 C16orf92Q96LL3 132 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 MGST2Q99735 147 aa8.65□□□□□ -1.02
DDX54-206ENST00000549271 IGSF23A1L1A6 192 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 A8MTW9 85 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 GOSR2O14653 212 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 SIX6O95475 246 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 S100A7P31151 101 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 CAV2P51636 162 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 FXYD7P58549 80 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 OXA1LQ15070 435 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 FAM78BQ5VT40 261 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 MARVELD1Q9BSK0 173 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 SLC35B3Q9H1N7 401 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 ARV1Q9H2C2 271 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 BATF3Q9NR55 127 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 RPRMQ9NS64 109 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 LYRM2Q9NU23 88 aaPredicted RBP8.64□□□□□ -1.03
DDX54-206ENST00000549271 RFNGQ9Y644 331 aa8.64□□□□□ -1.03
DDX54-206ENST00000549271 INMT-MINDY4F8WBC2 141 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 RPL7P18124 248 aaKnown RBP8.63□□□□□ -1.03
DDX54-206ENST00000549271 S100A10P60903 97 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 PSG9Q00887 426 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 VWC2Q2TAL6 325 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 PXDC1Q5TGL8 231 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 EBLN2Q6P2I7 272 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 AMTNQ6UX39 209 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 ZNF546Q86UE3 836 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 RNF182Q8N6D2 247 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 TMEM252Q8N6L7 170 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 OR4B1Q8NGF8 309 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 TMEM37Q8WXS4 190 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 GPN1Q9HCN4 374 aaPredicted RBP8.63□□□□□ -1.03
DDX54-206ENST00000549271 DKK2Q9UBU2 259 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 WDR83OSQ9Y284 106 aa8.63□□□□□ -1.03
DDX54-206ENST00000549271 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
DDX54-206ENST00000549271 A0A087X0K7 114 aa8.62□□□□□ -1.03
DDX54-206ENST00000549271 PRAF2O60831 178 aa8.62□□□□□ -1.03
DDX54-206ENST00000549271 PVALBP20472 110 aaPredicted RBP8.62□□□□□ -1.03
DDX54-206ENST00000549271 CAMLGP49069 296 aa8.62□□□□□ -1.03
DDX54-206ENST00000549271 SULT1A1P50225 295 aa8.62□□□□□ -1.03
DDX54-206ENST00000549271 MORN5Q5VZ52 161 aa8.62□□□□□ -1.03
DDX54-206ENST00000549271 MIC13Q5XKP0 118 aa8.62□□□□□ -1.03
DDX54-206ENST00000549271 LINC00305Q7Z4B0 112 aa8.62□□□□□ -1.03
DDX54-206ENST00000549271 NIPSNAP3BQ9BS92 247 aa8.62□□□□□ -1.03
DDX54-206ENST00000549271 UQCC1Q9NVA1 299 aa8.62□□□□□ -1.03
DDX54-206ENST00000549271 H0YIZ8 118 aa8.61□□□□□ -1.03
DDX54-206ENST00000549271 S100A11P31949 105 aa8.61□□□□□ -1.03
DDX54-206ENST00000549271 FGL1Q08830 312 aa8.61□□□□□ -1.03
DDX54-206ENST00000549271 FAM222AQ5U5X8 452 aa8.61□□□□□ -1.03
DDX54-206ENST00000549271 C1orf158Q8N1D5 194 aa8.61□□□□□ -1.03
DDX54-206ENST00000549271 CHAC2Q8WUX2 184 aa8.61□□□□□ -1.03
DDX54-206ENST00000549271 NMES1Q9C002 83 aa8.61□□□□□ -1.03
DDX54-206ENST00000549271 DNAJC4Q9NNZ3 241 aa8.61□□□□□ -1.03
DDX54-206ENST00000549271 CXCL3P19876 107 aa8.6□□□□□ -1.03
DDX54-206ENST00000549271 EMP1P54849 157 aa8.6□□□□□ -1.03
DDX54-206ENST00000549271 NHLH2Q02577 135 aa8.6□□□□□ -1.03
DDX54-206ENST00000549271 RAB31Q13636 194 aa8.6□□□□□ -1.03
DDX54-206ENST00000549271 OPCMLQ14982 345 aa8.6□□□□□ -1.03
DDX54-206ENST00000549271 PSG3Q16557 428 aa8.6□□□□□ -1.03
DDX54-206ENST00000549271 C10orf113Q5VZT2 155 aa8.6□□□□□ -1.03
DDX54-206ENST00000549271 SPATA12Q7Z6I5 190 aa8.6□□□□□ -1.03
DDX54-206ENST00000549271 S100A7AQ86SG5 101 aa8.6□□□□□ -1.03
DDX54-206ENST00000549271 OR5AC2Q9NZP5 309 aa8.6□□□□□ -1.03
DDX54-206ENST00000549271 GOLT1BQ9Y3E0 138 aa8.6□□□□□ -1.03
DDX54-206ENST00000549271 IGHV3OR16-12A0A075B7B8 117 aa8.59□□□□□ -1.03
DDX54-206ENST00000549271 TRAV5A0A0B4J249 113 aa8.59□□□□□ -1.03
DDX54-206ENST00000549271 COX7A2P2O60397 106 aa8.59□□□□□ -1.03
DDX54-206ENST00000549271 HBE1P02100 147 aa8.59□□□□□ -1.03
DDX54-206ENST00000549271 SNRPCP09234 159 aaKnown RBP8.59□□□□□ -1.03
DDX54-206ENST00000549271 PRB4P10163 310 aaPredicted RBP8.59□□□□□ -1.03
DDX54-206ENST00000549271 RPL29P47914 159 aaKnown RBP8.59□□□□□ -1.03
DDX54-206ENST00000549271 CNN1P51911 297 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms