RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GPR82Q96P67 336 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 UHRF2Q96PU4 802 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 SDHCQ99643 169 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-211ENST00000547950 SHANK2-AS3Q9BTD1 123 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 ARL6Q9H0F7 186 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 NPVFQ9HCQ7 196 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 PPP1R14DQ9NXH3 145 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 MGAT4CQ9UBM8 478 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 DKK2Q9UBU2 259 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 YTHDF2Q9Y5A9 579 aaKnown RBP4.78□□□□□ -1.64
SCAF11-211ENST00000547950 TRAV12-2A0A075B6T6 113 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 TRAV6A0A075B6T7 132 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 FAM25EA8MYX2 175 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 H3BRN7 92 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 CCSO14618 274 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 GOSR2O14653 212 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 PLA2G10O15496 165 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 MBPP02686 304 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-211ENST00000547950 IL7P13232 177 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 HTN1P15515 57 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 RPL7P18124 248 aaKnown RBP4.77□□□□□ -1.65
SCAF11-211ENST00000547950 BTCP35070 178 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 DAD1P61803 113 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 DLK1P80370 383 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 SLC38A11Q08AI6 406 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 ARL16Q0P5N6 197 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 ZNF846Q147U1 533 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 TEPPQ6URK8 271 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 AMTNQ6UX39 209 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 TMEM14EPQ6UXP3 125 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 PATE2Q6UY27 113 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 UBE2DNLQ8IWF7 75 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 OR11H7Q8NGC8 314 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 MITD1Q8WV92 249 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 IGF2BP2-AS1Q96M15 143 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 LINC01587Q99440 93 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 ARV1Q9H2C2 271 aa4.77□□□□□ -1.65
SCAF11-211ENST00000547950 RCL1Q9Y2P8 373 aaKnown RBP4.77□□□□□ -1.65
SCAF11-211ENST00000547950 IGLV2-18A0A075B6J9 118 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 TEX48A0A1B0GUV7 120 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 C7orf66A4D0T2 115 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 C5orf51A6NDU8 294 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 L7N2F9 121 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 CRXO43186 299 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-211ENST00000547950 TSC22D2O75157 780 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 DEFB130BP0DP73 79 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 DEFB130AP0DP74 79 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 CXCL3P19876 107 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 AZU1P20160 251 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 BCAP31P51572 246 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 TAS2R30P59541 319 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 PLP1P60201 277 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 VAMP2P63027 116 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 HIST1H1AQ02539 215 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-211ENST00000547950 FCN2Q15485 313 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 PSG3Q16557 428 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 CNPY1Q3B7I2 92 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 S100A7AQ86SG5 101 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 BAP18Q8IXM2 172 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 FAM210BQ96KR6 192 aa4.76□□□□□ -1.65
SCAF11-211ENST00000547950 LSM5Q9Y4Y9 91 aaKnown RBP4.76□□□□□ -1.65
SCAF11-211ENST00000547950 A8MTW9 85 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 FNDC10F2Z333 226 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 H3BTX0 84 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 AGPAT2O15120 278 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 LYRM1O43325 122 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 COX7A2P2O60397 106 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 CST7O76096 145 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 INSP01308 110 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 TCRBP04435 133 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 CAV2P51636 162 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 SRSF3P84103 164 aaKnown RBP4.75□□□□□ -1.65
SCAF11-211ENST00000547950 RAB31Q13636 194 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 OXA1LQ15070 435 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 PXDC1Q5TGL8 231 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 TMEM88Q6PEY1 159 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 LINC00336Q6ZUF6 198 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 LINC00305Q7Z4B0 112 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 ZNF546Q86UE3 836 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 OR8A1Q8NGG7 326 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 RPUSD4Q96CM3 377 aaKnown RBP4.75□□□□□ -1.65
SCAF11-211ENST00000547950 SEC22CQ9BRL7 303 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 GGACTQ9BVM4 153 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 C20orf85Q9H1P6 137 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 AGRNO00468 2067 aa4.75□□□□□ -1.65
SCAF11-211ENST00000547950 A0A087X0K7 114 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 TRAV5A0A0B4J249 113 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 FAM24AA6NFZ4 105 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 PRSS29PA6NIE9 313 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 PRAC2D3DTV9 90 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 F5H768 121 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 BOLA2-SMG1P6H3BVE0 249 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 K7EPK0 472 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 CAMLGP49069 296 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 S100A10P60903 97 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 B2MP61769 119 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 MORN5Q5VZ52 161 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 C10orf113Q5VZT2 155 aa4.74□□□□□ -1.65
SCAF11-211ENST00000547950 Q6ZRG5 221 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms