RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ZNF705AQ6ZN79 300 aaPredicted RBP11.51□□□□□ -0.57
DDX54-204ENST00000546898 OR5C1Q8NGR4 320 aa11.51□□□□□ -0.57
DDX54-204ENST00000546898 LRRC20Q8TCA0 184 aa11.51□□□□□ -0.57
DDX54-204ENST00000546898 NEU1Q99519 415 aa11.51□□□□□ -0.57
DDX54-204ENST00000546898 SLC50A1Q9BRV3 221 aa11.51□□□□□ -0.57
DDX54-204ENST00000546898 SLC39A9Q9NUM3 307 aa11.51□□□□□ -0.57
DDX54-204ENST00000546898 SACSQ9NZJ4 4579 aa11.5□□□□□ -0.57
DDX54-204ENST00000546898 DEFB4AO15263 64 aa11.5□□□□□ -0.57
DDX54-204ENST00000546898 RBMY1A1P0DJD3 496 aaKnown RBP11.5□□□□□ -0.57
DDX54-204ENST00000546898 RBMY1CP0DJD4 496 aa11.5□□□□□ -0.57
DDX54-204ENST00000546898 CXCL3P19876 107 aa11.5□□□□□ -0.57
DDX54-204ENST00000546898 NHLH2Q02577 135 aa11.5□□□□□ -0.57
DDX54-204ENST00000546898 RBMY1FQ15415 496 aaKnown RBP11.5□□□□□ -0.57
DDX54-204ENST00000546898 RNF182Q8N6D2 247 aa11.5□□□□□ -0.57
DDX54-204ENST00000546898 ZNF738Q8NE65 137 aa11.5□□□□□ -0.57
DDX54-204ENST00000546898 PHLDA1Q8WV24 401 aaPredicted RBP11.5□□□□□ -0.57
DDX54-204ENST00000546898 SLC35B3Q9H1N7 401 aa11.5□□□□□ -0.57
DDX54-204ENST00000546898 PXMP4Q9Y6I8 212 aa11.5□□□□□ -0.57
DDX54-204ENST00000546898 PLECQ15149 4684 aaKnown RBP11.5□□□□□ -0.57
DDX54-204ENST00000546898 ALMS1Q8TCU4 4167 aa11.49□□□□□ -0.57
DDX54-204ENST00000546898 RYR2Q92736 4967 aa11.49□□□□□ -0.57
DDX54-204ENST00000546898 ZNF705FA8MVS1 300 aaPredicted RBP11.49□□□□□ -0.57
DDX54-204ENST00000546898 MPC2O95563 127 aa11.49□□□□□ -0.57
DDX54-204ENST00000546898 AMBPP02760 352 aa11.49□□□□□ -0.57
DDX54-204ENST00000546898 ZNF705DP0CH99 300 aaPredicted RBP11.49□□□□□ -0.57
DDX54-204ENST00000546898 ZNF705BP0CI00 300 aaPredicted RBP11.49□□□□□ -0.57
DDX54-204ENST00000546898 NANOS2P60321 138 aaKnown RBP11.49□□□□□ -0.57
DDX54-204ENST00000546898 PSG3Q16557 428 aa11.49□□□□□ -0.57
DDX54-204ENST00000546898 IGFL4Q6B9Z1 124 aa11.49□□□□□ -0.57
DDX54-204ENST00000546898 NPCDR1Q9BY65 106 aa11.49□□□□□ -0.57
DDX54-204ENST00000546898 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
DDX54-204ENST00000546898 SMIM9A6NGZ8 99 aa11.48□□□□□ -0.57
DDX54-204ENST00000546898 IGLC2P0DOY2 106 aa11.48□□□□□ -0.57
DDX54-204ENST00000546898 CNN1P51911 297 aaKnown RBP11.48□□□□□ -0.57
DDX54-204ENST00000546898 FXYD7P58549 80 aa11.48□□□□□ -0.57
DDX54-204ENST00000546898 MORN5Q5VZ52 161 aa11.48□□□□□ -0.57
DDX54-204ENST00000546898 AMTNQ6UX39 209 aa11.48□□□□□ -0.57
DDX54-204ENST00000546898 ZNF331Q9NQX6 463 aaPredicted RBP11.48□□□□□ -0.57
DDX54-204ENST00000546898 GOLT1BQ9Y3E0 138 aa11.48□□□□□ -0.57
DDX54-204ENST00000546898 ALG5Q9Y673 324 aa11.48□□□□□ -0.57
DDX54-204ENST00000546898 C11orf94C9JXX5 98 aa11.47□□□□□ -0.57
DDX54-204ENST00000546898 CLINT1Q14677 625 aa11.47□□□□□ -0.57
DDX54-204ENST00000546898 GUK1Q16774 197 aa11.47□□□□□ -0.57
DDX54-204ENST00000546898 OR11H7Q8NGC8 314 aa11.47□□□□□ -0.57
DDX54-204ENST00000546898 OR8A1Q8NGG7 326 aa11.47□□□□□ -0.57
DDX54-204ENST00000546898 RNF126Q9BV68 326 aa11.47□□□□□ -0.57
DDX54-204ENST00000546898 DNAH1Q9P2D7 4330 aa11.46□□□□□ -0.57
DDX54-204ENST00000546898 TMEM189A5PLL7 270 aa11.46□□□□□ -0.57
DDX54-204ENST00000546898 HLA-DMBP28068 263 aa11.46□□□□□ -0.57
DDX54-204ENST00000546898 THAP6Q8TBB0 222 aa11.46□□□□□ -0.57
DDX54-204ENST00000546898 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.57
DDX54-204ENST00000546898 ATP5SQ99766 215 aa11.46□□□□□ -0.57
DDX54-204ENST00000546898 WDR61Q9GZS3 305 aaKnown RBP11.46□□□□□ -0.57
DDX54-204ENST00000546898 HSPB11Q9Y547 144 aa11.46□□□□□ -0.57
DDX54-204ENST00000546898 C17orf112F2Z3M2 114 aa11.45□□□□□ -0.58
DDX54-204ENST00000546898 ZNF253O75346 499 aa11.45□□□□□ -0.58
DDX54-204ENST00000546898 HIST1H1AQ02539 215 aaPredicted RBP11.45□□□□□ -0.58
DDX54-204ENST00000546898 LINC00476Q8WZB0 136 aa11.45□□□□□ -0.58
DDX54-204ENST00000546898 RPUSD4Q96CM3 377 aaKnown RBP11.45□□□□□ -0.58
DDX54-204ENST00000546898 TMEM14CQ9P0S9 112 aa11.45□□□□□ -0.58
DDX54-204ENST00000546898 MBD2Q9UBB5 411 aa11.45□□□□□ -0.58
DDX54-204ENST00000546898 RFNGQ9Y644 331 aa11.45□□□□□ -0.58
DDX54-204ENST00000546898 IGHV3OR16-12A0A075B7B8 117 aa11.44□□□□□ -0.58
DDX54-204ENST00000546898 TRAV5A0A0B4J249 113 aa11.44□□□□□ -0.58
DDX54-204ENST00000546898 H3BQ15 152 aa11.44□□□□□ -0.58
DDX54-204ENST00000546898 BOLA2-SMG1P6H3BVE0 249 aa11.44□□□□□ -0.58
DDX54-204ENST00000546898 SLC17A3O00476 420 aa11.44□□□□□ -0.58
DDX54-204ENST00000546898 INSP01308 110 aa11.44□□□□□ -0.58
DDX54-204ENST00000546898 RPL12P30050 165 aaKnown RBP11.44□□□□□ -0.58
DDX54-204ENST00000546898 C1orf158Q8N1D5 194 aa11.44□□□□□ -0.58
DDX54-204ENST00000546898 SAT2Q96F10 170 aaPredicted RBP11.44□□□□□ -0.58
DDX54-204ENST00000546898 TEX48A0A1B0GUV7 120 aa11.43□□□□□ -0.58
DDX54-204ENST00000546898 HBE1P02100 147 aa11.43□□□□□ -0.58
DDX54-204ENST00000546898 SNRPCP09234 159 aaKnown RBP11.43□□□□□ -0.58
DDX54-204ENST00000546898 TCTAP57738 103 aa11.43□□□□□ -0.58
DDX54-204ENST00000546898 SPINK13Q1W4C9 94 aa11.43□□□□□ -0.58
DDX54-204ENST00000546898 C2CD4CQ8TF44 421 aa11.43□□□□□ -0.58
DDX54-204ENST00000546898 MRPL32Q9BYC8 188 aaKnown RBP11.43□□□□□ -0.58
DDX54-204ENST00000546898 MED28Q9H204 178 aa11.43□□□□□ -0.58
DDX54-204ENST00000546898 CELA1Q9UNI1 258 aa11.43□□□□□ -0.58
DDX54-204ENST00000546898 TRAV10A0A0B4J240 114 aa11.42□□□□□ -0.58
DDX54-204ENST00000546898 H3BTX0 84 aa11.42□□□□□ -0.58
DDX54-204ENST00000546898 M0R2Z0 102 aa11.42□□□□□ -0.58
DDX54-204ENST00000546898 CRXO43186 299 aaPredicted RBP11.42□□□□□ -0.58
DDX54-204ENST00000546898 HIST1H1EP10412 219 aaKnown RBP11.42□□□□□ -0.58
DDX54-204ENST00000546898 RHOBP62745 196 aa11.42□□□□□ -0.58
DDX54-204ENST00000546898 PDE6HQ13956 83 aa11.42□□□□□ -0.58
DDX54-204ENST00000546898 RRN3P1Q2M238 152 aa11.42□□□□□ -0.58
DDX54-204ENST00000546898 GCSAMLQ5JQS6 135 aa11.42□□□□□ -0.58
DDX54-204ENST00000546898 Q6ZTC4 211 aa11.42□□□□□ -0.58
DDX54-204ENST00000546898 TMEM208Q9BTX3 173 aa11.42□□□□□ -0.58
DDX54-204ENST00000546898 PPP1R14DQ9NXH3 145 aa11.42□□□□□ -0.58
DDX54-204ENST00000546898 ZNF586Q9NXT0 402 aa11.42□□□□□ -0.58
DDX54-204ENST00000546898 TRBV19A0A075B6N1 114 aa11.41□□□□□ -0.58
DDX54-204ENST00000546898 IFNA5P01569 189 aa11.41□□□□□ -0.58
DDX54-204ENST00000546898 SPART-AS1P0CW21 52 aa11.41□□□□□ -0.58
DDX54-204ENST00000546898 OR10J6PQ8NGY7 276 aa11.41□□□□□ -0.58
DDX54-204ENST00000546898 ASB13Q8WXK3 278 aa11.41□□□□□ -0.58
DDX54-204ENST00000546898 MRPL53Q96EL3 112 aaKnown RBP11.41□□□□□ -0.58
DDX54-204ENST00000546898 PARD6GQ9BYG4 376 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms