RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-223	ENST00000545153	CASC10	Q5T4H9	136 aa		10.45	□□□□□ -0.74
PTPN6-223	ENST00000545153	FAM78B	Q5VT40	261 aa		10.45	□□□□□ -0.74
PTPN6-223	ENST00000545153	SPATA31B1P	Q5VZV4	182 aa		10.45	□□□□□ -0.74
PTPN6-223	ENST00000545153	SCGB1C1	Q8TD33	95 aa		10.45	□□□□□ -0.74
PTPN6-223	ENST00000545153	XCL2	Q9UBD3	114 aa		10.45	□□□□□ -0.74
PTPN6-223	ENST00000545153	C17orf112	F2Z3M2	114 aa		10.44	□□□□□ -0.74
PTPN6-223	ENST00000545153		H3BQ15	152 aa		10.44	□□□□□ -0.74
PTPN6-223	ENST00000545153	ZNF705D	P0CH99	300 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN6-223	ENST00000545153	ZNF705B	P0CI00	300 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN6-223	ENST00000545153	PSG3	Q16557	428 aa		10.44	□□□□□ -0.74
PTPN6-223	ENST00000545153	CSNK1G2-AS1	Q8NCQ2	148 aa		10.44	□□□□□ -0.74
PTPN6-223	ENST00000545153	ZNF738	Q8NE65	137 aa		10.44	□□□□□ -0.74
PTPN6-223	ENST00000545153	IL17D	Q8TAD2	202 aa		10.44	□□□□□ -0.74
PTPN6-223	ENST00000545153	IGLC2	P0DOY2	106 aa		10.43	□□□□□ -0.74
PTPN6-223	ENST00000545153	PRB4	P10163	310 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN6-223	ENST00000545153	PSG9	Q00887	426 aa		10.43	□□□□□ -0.74
PTPN6-223	ENST00000545153	ASB13	Q8WXK3	278 aa		10.43	□□□□□ -0.74
PTPN6-223	ENST00000545153	CLUHP3	Q96NS8	147 aa		10.43	□□□□□ -0.74
PTPN6-223	ENST00000545153	C1QTNF4	Q9BXJ3	329 aa		10.43	□□□□□ -0.74
PTPN6-223	ENST00000545153	SLC35B3	Q9H1N7	401 aa		10.43	□□□□□ -0.74
PTPN6-223	ENST00000545153	HRH4	Q9H3N8	390 aa		10.43	□□□□□ -0.74
PTPN6-223	ENST00000545153	STARD9	Q9P2P6	4700 aa		10.43	□□□□□ -0.74
PTPN6-223	ENST00000545153	DEFB4A	O15263	64 aa		10.42	□□□□□ -0.74
PTPN6-223	ENST00000545153	DUSP14	O95147	198 aa	Known RBP	10.42	□□□□□ -0.74
PTPN6-223	ENST00000545153	CXCL2	P19875	107 aa		10.42	□□□□□ -0.74
PTPN6-223	ENST00000545153	LCN15	Q6UWW0	184 aa		10.42	□□□□□ -0.74
PTPN6-223	ENST00000545153	MIR17HG	Q75NE6	70 aa		10.42	□□□□□ -0.74
PTPN6-223	ENST00000545153	SAT2	Q96F10	170 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN6-223	ENST00000545153	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN6-223	ENST00000545153	KCNIP2	Q9NS61	270 aa		10.42	□□□□□ -0.74
PTPN6-223	ENST00000545153	ZNF586	Q9NXT0	402 aa		10.42	□□□□□ -0.74
PTPN6-223	ENST00000545153	RFNG	Q9Y644	331 aa		10.42	□□□□□ -0.74
PTPN6-223	ENST00000545153	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN6-223	ENST00000545153	SLC17A3	O00476	420 aa		10.41	□□□□□ -0.74
PTPN6-223	ENST00000545153	CNN1	P51911	297 aa	Known RBP	10.41	□□□□□ -0.74
PTPN6-223	ENST00000545153	GUK1	Q16774	197 aa		10.41	□□□□□ -0.74
PTPN6-223	ENST00000545153	FFAR4	Q5NUL3	377 aa		10.41	□□□□□ -0.74
PTPN6-223	ENST00000545153	OR2T35	Q8NGX2	323 aa		10.41	□□□□□ -0.74
PTPN6-223	ENST00000545153	RPUSD4	Q96CM3	377 aa	Known RBP	10.41	□□□□□ -0.74
PTPN6-223	ENST00000545153	AQP10	Q96PS8	301 aa		10.41	□□□□□ -0.74
PTPN6-223	ENST00000545153	SLC50A1	Q9BRV3	221 aa		10.41	□□□□□ -0.74
PTPN6-223	ENST00000545153	TMEM14C	Q9P0S9	112 aa		10.41	□□□□□ -0.74
PTPN6-223	ENST00000545153	CSMD3	Q7Z407	3707 aa		10.41	□□□□□ -0.74
PTPN6-223	ENST00000545153	ZNF705E	A8MWA4	302 aa	Predicted RBP	10.4	□□□□□ -0.74
PTPN6-223	ENST00000545153	PYY	P10082	97 aa		10.4	□□□□□ -0.74
PTPN6-223	ENST00000545153	OR8A1	Q8NGG7	326 aa		10.4	□□□□□ -0.74
PTPN6-223	ENST00000545153	FAM167A-AS1	Q96KT0	104 aa		10.4	□□□□□ -0.74
PTPN6-223	ENST00000545153	SLC25A2	Q9BXI2	301 aa		10.4	□□□□□ -0.74
PTPN6-223	ENST00000545153	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.4	□□□□□ -0.74
PTPN6-223	ENST00000545153	MFF	Q9GZY8	342 aa		10.4	□□□□□ -0.74
PTPN6-223	ENST00000545153		X6R8D5	127 aa		10.4	□□□□□ -0.74
PTPN6-223	ENST00000545153	TRBV19	A0A075B6N1	114 aa		10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	FXYD6-FXYD2	A0A087WZ82	144 aa		10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	IGHV4-28	A0A0C4DH34	117 aa		10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	PRAC2	D3DTV9	90 aa		10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	RBMY1A1	P0DJD3	496 aa	Known RBP	10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	RBMY1C	P0DJD4	496 aa		10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	HIST1H1E	P10412	219 aa	Known RBP	10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	RHOB	P62745	196 aa		10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	HIST1H1A	Q02539	215 aa	Predicted RBP	10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	RBMY1F	Q15415	496 aa	Known RBP	10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	AMTN	Q6UX39	209 aa		10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	BLNK	Q8WV28	456 aa		10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	FUT9	Q9Y231	359 aa		10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	TIMM9	Q9Y5J7	89 aa		10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	PLEC	Q15149	4684 aa	Known RBP	10.39	□□□□□ -0.75
PTPN6-223	ENST00000545153	AGRN	O00468	2067 aa		10.38	□□□□□ -0.75
PTPN6-223	ENST00000545153	IGHV3OR16-12	A0A075B7B8	117 aa		10.38	□□□□□ -0.75
PTPN6-223	ENST00000545153		A8MTW9	85 aa		10.38	□□□□□ -0.75
PTPN6-223	ENST00000545153	MIF	P14174	115 aa		10.38	□□□□□ -0.75
PTPN6-223	ENST00000545153	PMS2P11	Q13670	270 aa		10.38	□□□□□ -0.75
PTPN6-223	ENST00000545153		Q8NAQ8	132 aa		10.38	□□□□□ -0.75
PTPN6-223	ENST00000545153	MRPL32	Q9BYC8	188 aa	Known RBP	10.38	□□□□□ -0.75
PTPN6-223	ENST00000545153	OR51M1	Q9H341	326 aa		10.38	□□□□□ -0.75
PTPN6-223	ENST00000545153	PPP1R14D	Q9NXH3	145 aa		10.38	□□□□□ -0.75
PTPN6-223	ENST00000545153	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.37	□□□□□ -0.75
PTPN6-223	ENST00000545153	CXorf65	A6NEN9	183 aa		10.37	□□□□□ -0.75
PTPN6-223	ENST00000545153	EIF3G	O75821	320 aa	Known RBP eCLIP	10.37	□□□□□ -0.75
PTPN6-223	ENST00000545153	NDUFB4	O95168	129 aa		10.37	□□□□□ -0.75
PTPN6-223	ENST00000545153	RYR3	Q15413	4870 aa		10.37	□□□□□ -0.75
PTPN6-223	ENST00000545153	SPINK13	Q1W4C9	94 aa		10.37	□□□□□ -0.75
PTPN6-223	ENST00000545153	C11orf45	Q8TAV5	145 aa		10.37	□□□□□ -0.75
PTPN6-223	ENST00000545153	RNF141	Q8WVD5	230 aa		10.37	□□□□□ -0.75
PTPN6-223	ENST00000545153	PAXX	Q9BUH6	204 aa		10.37	□□□□□ -0.75
PTPN6-223	ENST00000545153	C11orf68	Q9H3H3	251 aa	Known RBP	10.37	□□□□□ -0.75
PTPN6-223	ENST00000545153	TNFSF18	Q9UNG2	199 aa		10.37	□□□□□ -0.75
PTPN6-223	ENST00000545153	RNF222	A6NCQ9	220 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153		G3V3Q6	166 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	SMLR1	H3BR10	107 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153		M0R2Z0	102 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	ZNF253	O75346	499 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	OR10J4	P0C629	311 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	NBEAP1	P0C6P0	100 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	NANOS2	P60321	138 aa	Known RBP	10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	ZNF266	Q14584	549 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	C1orf158	Q8N1D5	194 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	HSD17B11	Q8NBQ5	300 aa		10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms