RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 SLC25A31Q9H0C2 315 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 HRH4Q9H3N8 390 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 SLC39A9Q9NUM3 307 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 EPPK1P58107 5090 aaKnown RBP8.25□□□□□ -1.09
YBX3-216ENST00000544622 ALMS1Q8TCU4 4167 aa8.25□□□□□ -1.09
YBX3-216ENST00000544622 IGHV4-28A0A0C4DH34 117 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 UBE2L5PA0A1B0GUS4 154 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 DEFB4AO15263 64 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 SSNA1O43805 119 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 COX7A2P2O60397 106 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 IGKV3-20P01619 116 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 B2MP61769 119 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 PSG9Q00887 426 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 BPIFA4PQ86YQ2 179 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 RNF182Q8N6D2 247 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 OR4B1Q8NGF8 309 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 OR1L4Q8NGR5 311 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 C11orf45Q8TAV5 145 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 SLC35B3Q9H1N7 401 aa8.24□□□□□ -1.09
YBX3-216ENST00000544622 ZNF331Q9NQX6 463 aaPredicted RBP8.24□□□□□ -1.09
YBX3-216ENST00000544622 TRAV5A0A0B4J249 113 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 NUPR2A6NF83 97 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 H3BQ15 152 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 CRXO43186 299 aaPredicted RBP8.23□□□□□ -1.09
YBX3-216ENST00000544622 HLA-DMBP28068 263 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
YBX3-216ENST00000544622 NANOS2P60321 138 aaKnown RBP8.23□□□□□ -1.09
YBX3-216ENST00000544622 FGL1Q08830 312 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 PMS2P11Q13670 270 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 PSG3Q16557 428 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 C1orf158Q8N1D5 194 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 PHLDA1Q8WV24 401 aaPredicted RBP8.23□□□□□ -1.09
YBX3-216ENST00000544622 PFDN5Q99471 154 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 WDR61Q9GZS3 305 aaKnown RBP8.23□□□□□ -1.09
YBX3-216ENST00000544622 ALG5Q9Y673 324 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 PXMP4Q9Y6I8 212 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 VPS13DQ5THJ4 4388 aa8.23□□□□□ -1.09
YBX3-216ENST00000544622 CXorf65A6NEN9 183 aa8.22□□□□□ -1.09
YBX3-216ENST00000544622 SMIM9A6NGZ8 99 aa8.22□□□□□ -1.09
YBX3-216ENST00000544622 FGF7P21781 194 aa8.22□□□□□ -1.09
YBX3-216ENST00000544622 FXYD7P58549 80 aa8.22□□□□□ -1.09
YBX3-216ENST00000544622 LCN15Q6UWW0 184 aa8.22□□□□□ -1.09
YBX3-216ENST00000544622 THAP6Q8TBB0 222 aa8.22□□□□□ -1.09
YBX3-216ENST00000544622 MFFQ9GZY8 342 aa8.22□□□□□ -1.09
YBX3-216ENST00000544622 SLC17A3O00476 420 aa8.21□□□□□ -1.1
YBX3-216ENST00000544622 ZNF253O75346 499 aa8.21□□□□□ -1.1
YBX3-216ENST00000544622 DUSP14O95147 198 aaKnown RBP8.21□□□□□ -1.1
YBX3-216ENST00000544622 SNRPCP09234 159 aaKnown RBP8.21□□□□□ -1.1
YBX3-216ENST00000544622 PET100P0DJ07 73 aa8.21□□□□□ -1.1
YBX3-216ENST00000544622 GUK1Q16774 197 aa8.21□□□□□ -1.1
YBX3-216ENST00000544622 GCSAMLQ5JQS6 135 aa8.21□□□□□ -1.1
YBX3-216ENST00000544622 OR11H7Q8NGC8 314 aa8.21□□□□□ -1.1
YBX3-216ENST00000544622 OR8A1Q8NGG7 326 aa8.21□□□□□ -1.1
YBX3-216ENST00000544622 SLC50A1Q9BRV3 221 aa8.21□□□□□ -1.1
YBX3-216ENST00000544622 ZNF586Q9NXT0 402 aa8.21□□□□□ -1.1
YBX3-216ENST00000544622 TMEM14CQ9P0S9 112 aa8.21□□□□□ -1.1
YBX3-216ENST00000544622 HSPB11Q9Y547 144 aa8.21□□□□□ -1.1
YBX3-216ENST00000544622 RPL12P30050 165 aaKnown RBP8.2□□□□□ -1.1
YBX3-216ENST00000544622 CLINT1Q14677 625 aa8.2□□□□□ -1.1
YBX3-216ENST00000544622 FAM167A-AS1Q96KT0 104 aa8.2□□□□□ -1.1
YBX3-216ENST00000544622 IGF2BP2-AS1Q96M15 143 aa8.2□□□□□ -1.1
YBX3-216ENST00000544622 ATP5SQ99766 215 aa8.2□□□□□ -1.1
YBX3-216ENST00000544622 MBD2Q9UBB5 411 aa8.2□□□□□ -1.1
YBX3-216ENST00000544622 TRBV19A0A075B6N1 114 aa8.19□□□□□ -1.1
YBX3-216ENST00000544622 PRAC2D3DTV9 90 aa8.19□□□□□ -1.1
YBX3-216ENST00000544622 JTBO76095 146 aa8.19□□□□□ -1.1
YBX3-216ENST00000544622 NDUFB4O95168 129 aa8.19□□□□□ -1.1
YBX3-216ENST00000544622 FCN2Q15485 313 aa8.19□□□□□ -1.1
YBX3-216ENST00000544622 C12orf74Q32Q52 190 aa8.19□□□□□ -1.1
YBX3-216ENST00000544622 ZNF738Q8NE65 137 aa8.19□□□□□ -1.1
YBX3-216ENST00000544622 LRRC20Q8TCA0 184 aa8.19□□□□□ -1.1
YBX3-216ENST00000544622 RPUSD4Q96CM3 377 aaKnown RBP8.19□□□□□ -1.1
YBX3-216ENST00000544622 PARD6GQ9BYG4 376 aaPredicted RBP8.19□□□□□ -1.1
YBX3-216ENST00000544622 WFDC1Q9HC57 220 aa8.19□□□□□ -1.1
YBX3-216ENST00000544622 CELA1Q9UNI1 258 aa8.19□□□□□ -1.1
YBX3-216ENST00000544622 KLK5Q9Y337 293 aaPredicted RBP8.19□□□□□ -1.1
YBX3-216ENST00000544622 C11orf94C9JXX5 98 aa8.18□□□□□ -1.1
YBX3-216ENST00000544622 H3BTX0 84 aa8.18□□□□□ -1.1
YBX3-216ENST00000544622 M0R2Z0 102 aa8.18□□□□□ -1.1
YBX3-216ENST00000544622 AMBPP02760 352 aa8.18□□□□□ -1.1
YBX3-216ENST00000544622 HIST1H1EP10412 219 aaKnown RBP8.18□□□□□ -1.1
YBX3-216ENST00000544622 OXA1LQ15070 435 aa8.18□□□□□ -1.1
YBX3-216ENST00000544622 SPINK13Q1W4C9 94 aa8.18□□□□□ -1.1
YBX3-216ENST00000544622 Q6ZTC4 211 aa8.18□□□□□ -1.1
YBX3-216ENST00000544622 LINC00476Q8WZB0 136 aa8.18□□□□□ -1.1
YBX3-216ENST00000544622 SLC25A2Q9BXI2 301 aa8.18□□□□□ -1.1
YBX3-216ENST00000544622 TMEM189A5PLL7 270 aa8.17□□□□□ -1.1
YBX3-216ENST00000544622 PYYP10082 97 aa8.17□□□□□ -1.1
YBX3-216ENST00000544622 HIST1H1AQ02539 215 aaPredicted RBP8.17□□□□□ -1.1
YBX3-216ENST00000544622 PDE6HQ13956 83 aa8.17□□□□□ -1.1
YBX3-216ENST00000544622 Q5BKY6 102 aa8.17□□□□□ -1.1
YBX3-216ENST00000544622 LCE2DQ5TA82 110 aaPredicted RBP8.17□□□□□ -1.1
YBX3-216ENST00000544622 MIR17HGQ75NE6 70 aa8.17□□□□□ -1.1
YBX3-216ENST00000544622 MRPL53Q96EL3 112 aaKnown RBP8.17□□□□□ -1.1
YBX3-216ENST00000544622 MED28Q9H204 178 aa8.17□□□□□ -1.1
YBX3-216ENST00000544622 KCNIP2Q9NS61 270 aa8.17□□□□□ -1.1
YBX3-216ENST00000544622 GOLT1BQ9Y3E0 138 aa8.17□□□□□ -1.1
YBX3-216ENST00000544622 RFNGQ9Y644 331 aa8.17□□□□□ -1.1
YBX3-216ENST00000544622 DNAH2Q9P225 4427 aa8.16□□□□□ -1.1
YBX3-216ENST00000544622 TRAV12-2A0A075B6T6 113 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms