RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 PRR20DP86480 221 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 PRR20BP86481 221 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 PRR20AP86496 221 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 PSG9Q00887 426 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 HIST1H1AQ02539 215 aaPredicted RBP8.06□□□□□ -1.12
DDB1-222ENST00000543627 GCSAMLQ5JQS6 135 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 C1QTNF4Q9BXJ3 329 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 MFFQ9GZY8 342 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 HSPB11Q9Y547 144 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 A0A0J9YX75 114 aa8.05□□□□□ -1.12
DDB1-222ENST00000543627 TMEM41BQ5BJD5 291 aa8.05□□□□□ -1.12
DDB1-222ENST00000543627 BLNKQ8WV28 456 aa8.05□□□□□ -1.12
DDB1-222ENST00000543627 ATP5SQ99766 215 aa8.05□□□□□ -1.12
DDB1-222ENST00000543627 WDR61Q9GZS3 305 aaKnown RBP8.05□□□□□ -1.12
DDB1-222ENST00000543627 ZNF705FA8MVS1 300 aaPredicted RBP8.04□□□□□ -1.12
DDB1-222ENST00000543627 DUSP14O95147 198 aaKnown RBP8.04□□□□□ -1.12
DDB1-222ENST00000543627 CNN1P51911 297 aaKnown RBP8.04□□□□□ -1.12
DDB1-222ENST00000543627 EMP1P54849 157 aa8.04□□□□□ -1.12
DDB1-222ENST00000543627 NANOS2P60321 138 aaKnown RBP8.04□□□□□ -1.12
DDB1-222ENST00000543627 PSG3Q16557 428 aa8.04□□□□□ -1.12
DDB1-222ENST00000543627 FFAR4Q5NUL3 377 aa8.04□□□□□ -1.12
DDB1-222ENST00000543627 SPATA31B1PQ5VZV4 182 aa8.04□□□□□ -1.12
DDB1-222ENST00000543627 C11orf45Q8TAV5 145 aa8.04□□□□□ -1.12
DDB1-222ENST00000543627 RPUSD4Q96CM3 377 aaKnown RBP8.04□□□□□ -1.12
DDB1-222ENST00000543627 TMEM208Q9BTX3 173 aa8.04□□□□□ -1.12
DDB1-222ENST00000543627 TIMM9Q9Y5J7 89 aa8.04□□□□□ -1.12
DDB1-222ENST00000543627 FXYD6-FXYD2A0A087WZ82 144 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 A0A087X0K7 114 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 IGHV4-28A0A0C4DH34 117 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 H3BQ15 152 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 M0R2Z0 102 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 SLC17A3O00476 420 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 MRPS12O15235 138 aaKnown RBP8.03□□□□□ -1.12
DDB1-222ENST00000543627 PYYP10082 97 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 SPINK13Q1W4C9 94 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 Q5BKY6 102 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 LCN15Q6UWW0 184 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 MIR17HGQ75NE6 70 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 WFDC1Q9HC57 220 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 RFNGQ9Y644 331 aa8.03□□□□□ -1.12
DDB1-222ENST00000543627 TRAV12-2A0A075B6T6 113 aa8.02□□□□□ -1.13
DDB1-222ENST00000543627 J3KRW8 73 aa8.02□□□□□ -1.13
DDB1-222ENST00000543627 EIF3GO75821 320 aaKnown RBP eCLIP8.02□□□□□ -1.13
DDB1-222ENST00000543627 RBMY1A1P0DJD3 496 aaKnown RBP8.02□□□□□ -1.13
DDB1-222ENST00000543627 RBMY1CP0DJD4 496 aa8.02□□□□□ -1.13
DDB1-222ENST00000543627 RBMY1FQ15415 496 aaKnown RBP8.02□□□□□ -1.13
DDB1-222ENST00000543627 CSNK1G2-AS1Q8NCQ2 148 aa8.02□□□□□ -1.13
DDB1-222ENST00000543627 SLC50A1Q9BRV3 221 aa8.02□□□□□ -1.13
DDB1-222ENST00000543627 HRH4Q9H3N8 390 aa8.02□□□□□ -1.13
DDB1-222ENST00000543627 ZNF331Q9NQX6 463 aaPredicted RBP8.02□□□□□ -1.13
DDB1-222ENST00000543627 KCNIP2Q9NS61 270 aa8.02□□□□□ -1.13
DDB1-222ENST00000543627 ZNF586Q9NXT0 402 aa8.02□□□□□ -1.13
DDB1-222ENST00000543627 GOLT1BQ9Y3E0 138 aa8.02□□□□□ -1.13
DDB1-222ENST00000543627 OR7C2O60412 319 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 GIPP09681 153 aaPredicted RBP8.01□□□□□ -1.13
DDB1-222ENST00000543627 OR10J4P0C629 311 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 IGLC2P0DOY2 106 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 MIFP14174 115 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 HTN1P15515 57 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 OXA1LQ15070 435 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 ZNF767PQ75MW2 155 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 INO80EQ8NBZ0 244 aaPredicted RBP8.01□□□□□ -1.13
DDB1-222ENST00000543627 OR8A1Q8NGG7 326 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 OR2T35Q8NGX2 323 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 OR10J6PQ8NGY7 276 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 CHAC2Q8WUX2 184 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 X6R8D5 127 aa8.01□□□□□ -1.13
DDB1-222ENST00000543627 DNAH7Q8WXX0 4024 aa8□□□□□ -1.13
DDB1-222ENST00000543627 A0A1W2PPV4 95 aa8□□□□□ -1.13
DDB1-222ENST00000543627 ZNF705EA8MWA4 302 aaPredicted RBP8□□□□□ -1.13
DDB1-222ENST00000543627 PRAC2D3DTV9 90 aa8□□□□□ -1.13
DDB1-222ENST00000543627 HIST1H1EP10412 219 aaKnown RBP8□□□□□ -1.13
DDB1-222ENST00000543627 CXCL2P19875 107 aa8□□□□□ -1.13
DDB1-222ENST00000543627 GUK1Q16774 197 aa8□□□□□ -1.13
DDB1-222ENST00000543627 BAP18Q8IXM2 172 aa8□□□□□ -1.13
DDB1-222ENST00000543627 EXOC3-AS1Q8N2X6 119 aa8□□□□□ -1.13
DDB1-222ENST00000543627 Q8NAQ8 132 aa8□□□□□ -1.13
DDB1-222ENST00000543627 HSD17B11Q8NBQ5 300 aa8□□□□□ -1.13
DDB1-222ENST00000543627 PHLDA1Q8WV24 401 aaPredicted RBP8□□□□□ -1.13
DDB1-222ENST00000543627 PAXXQ9BUH6 204 aa8□□□□□ -1.13
DDB1-222ENST00000543627 SLC25A2Q9BXI2 301 aa8□□□□□ -1.13
DDB1-222ENST00000543627 PARD6GQ9BYG4 376 aaPredicted RBP8□□□□□ -1.13
DDB1-222ENST00000543627 OR51M1Q9H341 326 aa8□□□□□ -1.13
DDB1-222ENST00000543627 FUT9Q9Y231 359 aa8□□□□□ -1.13
DDB1-222ENST00000543627 SMLR1H3BR10 107 aa7.99□□□□□ -1.13
DDB1-222ENST00000543627 HMGB3O15347 200 aaKnown RBP7.99□□□□□ -1.13
DDB1-222ENST00000543627 HBE1P02100 147 aa7.99□□□□□ -1.13
DDB1-222ENST00000543627 PRM2P04554 102 aa7.99□□□□□ -1.13
DDB1-222ENST00000543627 NBEAP1P0C6P0 100 aa7.99□□□□□ -1.13
DDB1-222ENST00000543627 ICAM4Q14773 271 aa7.99□□□□□ -1.13
DDB1-222ENST00000543627 ACOT6Q3I5F7 207 aaPredicted RBP7.99□□□□□ -1.13
DDB1-222ENST00000543627 FAM122CQ6P4D5 195 aa7.99□□□□□ -1.13
DDB1-222ENST00000543627 CEMP1Q6PRD7 247 aaPredicted RBP7.99□□□□□ -1.13
DDB1-222ENST00000543627 RNF141Q8WVD5 230 aa7.99□□□□□ -1.13
DDB1-222ENST00000543627 SAT2Q96F10 170 aaPredicted RBP7.99□□□□□ -1.13
DDB1-222ENST00000543627 LINC01587Q99440 93 aa7.99□□□□□ -1.13
DDB1-222ENST00000543627 MRPL32Q9BYC8 188 aaKnown RBP7.99□□□□□ -1.13
DDB1-222ENST00000543627 C11orf68Q9H3H3 251 aaKnown RBP7.99□□□□□ -1.13
DDB1-222ENST00000543627 AAMDCQ9H7C9 122 aa7.99□□□□□ -1.13
DDB1-222ENST00000543627 KLK5Q9Y337 293 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms