RNA–Protein interactions for RNA: ENST00000542602.1

PSMD9-208, Transcript of proteasome 26S subunit, non-ATPase 9, human

TSL 3 BASIC

Gene PSMD9, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD9-208	ENST00000542602	RNF126	Q9BV68	326 aa		13.76	□□□□□ -0.21
PSMD9-208	ENST00000542602	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.76	□□□□□ -0.21
PSMD9-208	ENST00000542602		A8MTW9	85 aa		13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	DEFB4A	O15263	64 aa		13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	MPC2	O95563	127 aa		13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	AMBP	P02760	352 aa		13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	RBMY1A1	P0DJD3	496 aa	Known RBP	13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	RBMY1C	P0DJD4	496 aa		13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	CXCL3	P19876	107 aa		13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	RBMY1F	Q15415	496 aa	Known RBP	13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	PSG3	Q16557	428 aa		13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	LCN15	Q6UWW0	184 aa		13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	ZNF738	Q8NE65	137 aa		13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	SLC50A1	Q9BRV3	221 aa		13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	PXMP4	Q9Y6I8	212 aa		13.75	□□□□□ -0.21
PSMD9-208	ENST00000542602	GUK1	Q16774	197 aa		13.74	□□□□□ -0.21
PSMD9-208	ENST00000542602	IGFL4	Q6B9Z1	124 aa		13.74	□□□□□ -0.21
PSMD9-208	ENST00000542602	RNF182	Q8N6D2	247 aa		13.74	□□□□□ -0.21
PSMD9-208	ENST00000542602	ZNF709	Q8N972	641 aa		13.74	□□□□□ -0.21
PSMD9-208	ENST00000542602	GOLT1B	Q9Y3E0	138 aa		13.74	□□□□□ -0.21
PSMD9-208	ENST00000542602	SACS	Q9NZJ4	4579 aa		13.74	□□□□□ -0.21
PSMD9-208	ENST00000542602	CNN1	P51911	297 aa	Known RBP	13.73	□□□□□ -0.21
PSMD9-208	ENST00000542602	FXYD7	P58549	80 aa		13.73	□□□□□ -0.21
PSMD9-208	ENST00000542602	NANOS2	P60321	138 aa	Known RBP	13.73	□□□□□ -0.21
PSMD9-208	ENST00000542602	NPCDR1	Q9BY65	106 aa		13.73	□□□□□ -0.21
PSMD9-208	ENST00000542602	SLC35B3	Q9H1N7	401 aa		13.73	□□□□□ -0.21
PSMD9-208	ENST00000542602	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMD9-208	ENST00000542602	KCNIP2	Q9NS61	270 aa		13.73	□□□□□ -0.21
PSMD9-208	ENST00000542602	TMEM189	A5PLL7	270 aa		13.72	□□□□□ -0.21
PSMD9-208	ENST00000542602	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD9-208	ENST00000542602	ZNF705D	P0CH99	300 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD9-208	ENST00000542602	ZNF705B	P0CI00	300 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD9-208	ENST00000542602	ALG5	Q9Y673	324 aa		13.72	□□□□□ -0.21
PSMD9-208	ENST00000542602	C11orf94	C9JXX5	98 aa		13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	C17orf112	F2Z3M2	114 aa		13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	IGLC2	P0DOY2	106 aa		13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	RPL12	P30050	165 aa	Known RBP	13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	CLINT1	Q14677	625 aa		13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	AMTN	Q6UX39	209 aa		13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	OR8A1	Q8NGG7	326 aa		13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	THAP6	Q8TBB0	222 aa		13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	RPUSD4	Q96CM3	377 aa	Known RBP	13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	WDR61	Q9GZS3	305 aa	Known RBP	13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	PPP1R14D	Q9NXH3	145 aa		13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	RYR2	Q92736	4967 aa		13.71	□□□□□ -0.21
PSMD9-208	ENST00000542602	PLEC	Q15149	4684 aa	Known RBP	13.7	□□□□□ -0.22
PSMD9-208	ENST00000542602	TRAV5	A0A0B4J249	113 aa		13.7	□□□□□ -0.22
PSMD9-208	ENST00000542602	MORN5	Q5VZ52	161 aa		13.7	□□□□□ -0.22
PSMD9-208	ENST00000542602	IGF2BP2-AS1	Q96M15	143 aa		13.7	□□□□□ -0.22
PSMD9-208	ENST00000542602	TMEM14C	Q9P0S9	112 aa		13.7	□□□□□ -0.22
PSMD9-208	ENST00000542602	HSPB11	Q9Y547	144 aa		13.7	□□□□□ -0.22
PSMD9-208	ENST00000542602	IGHV3OR16-12	A0A075B7B8	117 aa		13.69	□□□□□ -0.22
PSMD9-208	ENST00000542602		H3BQ15	152 aa		13.69	□□□□□ -0.22
PSMD9-208	ENST00000542602	ZNF253	O75346	499 aa		13.69	□□□□□ -0.22
PSMD9-208	ENST00000542602	TCTA	P57738	103 aa		13.69	□□□□□ -0.22
PSMD9-208	ENST00000542602	RHOB	P62745	196 aa		13.69	□□□□□ -0.22
PSMD9-208	ENST00000542602	HIST1H1A	Q02539	215 aa	Predicted RBP	13.69	□□□□□ -0.22
PSMD9-208	ENST00000542602	OR11H7	Q8NGC8	314 aa		13.69	□□□□□ -0.22
PSMD9-208	ENST00000542602	SAT2	Q96F10	170 aa	Predicted RBP	13.69	□□□□□ -0.22
PSMD9-208	ENST00000542602	ATP5S	Q99766	215 aa		13.69	□□□□□ -0.22
PSMD9-208	ENST00000542602	MED28	Q9H204	178 aa		13.69	□□□□□ -0.22
PSMD9-208	ENST00000542602	RFNG	Q9Y644	331 aa		13.69	□□□□□ -0.22
PSMD9-208	ENST00000542602	IFNA5	P01569	189 aa		13.68	□□□□□ -0.22
PSMD9-208	ENST00000542602	HLA-DMB	P28068	263 aa		13.68	□□□□□ -0.22
PSMD9-208	ENST00000542602	SCGB1C1	Q8TD33	95 aa		13.68	□□□□□ -0.22
PSMD9-208	ENST00000542602	C2CD4C	Q8TF44	421 aa		13.68	□□□□□ -0.22
PSMD9-208	ENST00000542602	LYST	Q99698	3801 aa		13.68	□□□□□ -0.22
PSMD9-208	ENST00000542602	TMEM208	Q9BTX3	173 aa		13.68	□□□□□ -0.22
PSMD9-208	ENST00000542602	HBE1	P02100	147 aa		13.67	□□□□□ -0.22
PSMD9-208	ENST00000542602	SNRPC	P09234	159 aa	Known RBP	13.67	□□□□□ -0.22
PSMD9-208	ENST00000542602	HIST1H1E	P10412	219 aa	Known RBP	13.67	□□□□□ -0.22
PSMD9-208	ENST00000542602	C1orf158	Q8N1D5	194 aa		13.67	□□□□□ -0.22
PSMD9-208	ENST00000542602	ASB13	Q8WXK3	278 aa		13.67	□□□□□ -0.22
PSMD9-208	ENST00000542602	MBD2	Q9UBB5	411 aa		13.67	□□□□□ -0.22
PSMD9-208	ENST00000542602	BOLA2-SMG1P6	H3BVE0	249 aa		13.66	□□□□□ -0.22
PSMD9-208	ENST00000542602	INS	P01308	110 aa		13.66	□□□□□ -0.22
PSMD9-208	ENST00000542602	SPART-AS1	P0CW21	52 aa		13.66	□□□□□ -0.22
PSMD9-208	ENST00000542602	PDE6H	Q13956	83 aa		13.66	□□□□□ -0.22
PSMD9-208	ENST00000542602	RRN3P1	Q2M238	152 aa		13.66	□□□□□ -0.22
PSMD9-208	ENST00000542602	OR10J6P	Q8NGY7	276 aa		13.66	□□□□□ -0.22
PSMD9-208	ENST00000542602	ZNF586	Q9NXT0	402 aa		13.66	□□□□□ -0.22
PSMD9-208	ENST00000542602	TRBV19	A0A075B6N1	114 aa		13.65	□□□□□ -0.22
PSMD9-208	ENST00000542602	TRAV10	A0A0B4J240	114 aa		13.65	□□□□□ -0.22
PSMD9-208	ENST00000542602	TEX48	A0A1B0GUV7	120 aa		13.65	□□□□□ -0.22
PSMD9-208	ENST00000542602		H3BTX0	84 aa		13.65	□□□□□ -0.22
PSMD9-208	ENST00000542602	SPINK13	Q1W4C9	94 aa		13.65	□□□□□ -0.22
PSMD9-208	ENST00000542602	MRPL32	Q9BYC8	188 aa	Known RBP	13.65	□□□□□ -0.22
PSMD9-208	ENST00000542602	PRELID1	Q9Y255	219 aa		13.65	□□□□□ -0.22
PSMD9-208	ENST00000542602	TIMM9	Q9Y5J7	89 aa		13.65	□□□□□ -0.22
PSMD9-208	ENST00000542602		M0R2Z0	102 aa		13.64	□□□□□ -0.23
PSMD9-208	ENST00000542602	SLC17A3	O00476	420 aa		13.64	□□□□□ -0.23
PSMD9-208	ENST00000542602	CRX	O43186	299 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD9-208	ENST00000542602	TSPO	P30536	169 aa		13.64	□□□□□ -0.23
PSMD9-208	ENST00000542602	FCN2	Q15485	313 aa		13.64	□□□□□ -0.23
PSMD9-208	ENST00000542602	RGS21	Q2M5E4	152 aa		13.64	□□□□□ -0.23
PSMD9-208	ENST00000542602	GCSAML	Q5JQS6	135 aa		13.64	□□□□□ -0.23
PSMD9-208	ENST00000542602	MRPL53	Q96EL3	112 aa	Known RBP	13.64	□□□□□ -0.23
PSMD9-208	ENST00000542602	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms