RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 CXCL3P19876 107 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 CAMLGP49069 296 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 RAB32Q13637 225 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 PSG3Q16557 428 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 SPINK13Q1W4C9 94 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 NRARPQ7Z6K4 114 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 TMEM208Q9BTX3 173 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 UQCC1Q9NVA1 299 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 DKK2Q9UBU2 259 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 BIRC6Q9NR09 4857 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 LOC102723971A0A1B0GUV8 181 aa11.73□□□□□ -0.53
CCND1-205ENST00000542367 UPK1BO75841 260 aa11.73□□□□□ -0.53
CCND1-205ENST00000542367 AMBPP02760 352 aa11.73□□□□□ -0.53
CCND1-205ENST00000542367 SNRPCP09234 159 aaKnown RBP11.73□□□□□ -0.53
CCND1-205ENST00000542367 PRB4P10163 310 aaPredicted RBP11.73□□□□□ -0.53
CCND1-205ENST00000542367 RAB31Q13636 194 aa11.73□□□□□ -0.53
CCND1-205ENST00000542367 RRN3P1Q2M238 152 aa11.73□□□□□ -0.53
CCND1-205ENST00000542367 FAM222AQ5U5X8 452 aa11.73□□□□□ -0.53
CCND1-205ENST00000542367 Q6ZRG5 221 aa11.73□□□□□ -0.53
CCND1-205ENST00000542367 TMEM252Q8N6L7 170 aa11.73□□□□□ -0.53
CCND1-205ENST00000542367 ENKURQ8TC29 256 aa11.73□□□□□ -0.53
CCND1-205ENST00000542367 LYRM2Q9NU23 88 aaPredicted RBP11.73□□□□□ -0.53
CCND1-205ENST00000542367 PLA2G2EQ9NZK7 142 aa11.73□□□□□ -0.53
CCND1-205ENST00000542367 FRAS1Q86XX4 4008 aa11.73□□□□□ -0.53
CCND1-205ENST00000542367 IGSF23A1L1A6 192 aa11.72□□□□□ -0.53
CCND1-205ENST00000542367 CRXO43186 299 aaPredicted RBP11.72□□□□□ -0.53
CCND1-205ENST00000542367 S100A11P31949 105 aa11.72□□□□□ -0.53
CCND1-205ENST00000542367 HIST1H1AQ02539 215 aaPredicted RBP11.72□□□□□ -0.53
CCND1-205ENST00000542367 MORN5Q5VZ52 161 aa11.72□□□□□ -0.53
CCND1-205ENST00000542367 C10orf113Q5VZT2 155 aa11.72□□□□□ -0.53
CCND1-205ENST00000542367 MIC13Q5XKP0 118 aa11.72□□□□□ -0.53
CCND1-205ENST00000542367 BPIFA4PQ86YQ2 179 aa11.72□□□□□ -0.53
CCND1-205ENST00000542367 OR8A1Q8NGG7 326 aa11.72□□□□□ -0.53
CCND1-205ENST00000542367 DNAJC4Q9NNZ3 241 aa11.72□□□□□ -0.53
CCND1-205ENST00000542367 WDR83OSQ9Y284 106 aa11.72□□□□□ -0.53
CCND1-205ENST00000542367 PRM2P04554 102 aa11.71□□□□□ -0.53
CCND1-205ENST00000542367 SULT1A1P50225 295 aa11.71□□□□□ -0.53
CCND1-205ENST00000542367 RHOBP62745 196 aa11.71□□□□□ -0.53
CCND1-205ENST00000542367 IFITM3Q01628 133 aa11.71□□□□□ -0.53
CCND1-205ENST00000542367 OPCMLQ14982 345 aa11.71□□□□□ -0.53
CCND1-205ENST00000542367 VWC2Q2TAL6 325 aa11.71□□□□□ -0.53
CCND1-205ENST00000542367 LCN15Q6UWW0 184 aa11.71□□□□□ -0.53
CCND1-205ENST00000542367 BAP18Q8IXM2 172 aa11.71□□□□□ -0.53
CCND1-205ENST00000542367 RPUSD4Q96CM3 377 aaKnown RBP11.71□□□□□ -0.53
CCND1-205ENST00000542367 NIPSNAP3BQ9BS92 247 aa11.71□□□□□ -0.53
CCND1-205ENST00000542367 GPN1Q9HCN4 374 aaPredicted RBP11.71□□□□□ -0.53
CCND1-205ENST00000542367 ZNF331Q9NQX6 463 aaPredicted RBP11.71□□□□□ -0.53
CCND1-205ENST00000542367 YTHDF2Q9Y5A9 579 aaKnown RBP11.71□□□□□ -0.53
CCND1-205ENST00000542367 DNAH10Q8IVF4 4471 aa11.71□□□□□ -0.54
CCND1-205ENST00000542367 TRAV12-2A0A075B6T6 113 aa11.7□□□□□ -0.54
CCND1-205ENST00000542367 TEX48A0A1B0GUV7 120 aa11.7□□□□□ -0.54
CCND1-205ENST00000542367 BOLA2-SMG1P6H3BVE0 249 aa11.7□□□□□ -0.54
CCND1-205ENST00000542367 INSP01308 110 aa11.7□□□□□ -0.54
CCND1-205ENST00000542367 CXCL2P19875 107 aa11.7□□□□□ -0.54
CCND1-205ENST00000542367 BAXQ07812 192 aa11.7□□□□□ -0.54
CCND1-205ENST00000542367 STX12Q86Y82 276 aa11.7□□□□□ -0.54
CCND1-205ENST00000542367 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
CCND1-205ENST00000542367 NDUFAF3Q9BU61 184 aa11.7□□□□□ -0.54
CCND1-205ENST00000542367 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
CCND1-205ENST00000542367 DNAH6Q9C0G6 4158 aa11.7□□□□□ -0.54
CCND1-205ENST00000542367 TRAV5A0A0B4J249 113 aa11.69□□□□□ -0.54
CCND1-205ENST00000542367 UBE2L5PA0A1B0GUS4 154 aa11.69□□□□□ -0.54
CCND1-205ENST00000542367 ZNF705GA8MUZ8 300 aaPredicted RBP11.69□□□□□ -0.54
CCND1-205ENST00000542367 H3BTX0 84 aa11.69□□□□□ -0.54
CCND1-205ENST00000542367 SIX6O95475 246 aa11.69□□□□□ -0.54
CCND1-205ENST00000542367 HBG1P69891 147 aa11.69□□□□□ -0.54
CCND1-205ENST00000542367 HBG2P69892 147 aa11.69□□□□□ -0.54
CCND1-205ENST00000542367 OR1L4Q8NGR5 311 aa11.69□□□□□ -0.54
CCND1-205ENST00000542367 PTTG2Q9NZH5 202 aa11.69□□□□□ -0.54
CCND1-205ENST00000542367 H3BQ15 152 aa11.68□□□□□ -0.54
CCND1-205ENST00000542367 SLC17A3O00476 420 aa11.68□□□□□ -0.54
CCND1-205ENST00000542367 IGLC2P0DOY2 106 aa11.68□□□□□ -0.54
CCND1-205ENST00000542367 RPL29P47914 159 aaKnown RBP11.68□□□□□ -0.54
CCND1-205ENST00000542367 B2MP61769 119 aa11.68□□□□□ -0.54
CCND1-205ENST00000542367 OXA1LQ15070 435 aa11.68□□□□□ -0.54
CCND1-205ENST00000542367 ATP6V1FQ16864 119 aa11.68□□□□□ -0.54
CCND1-205ENST00000542367 SAT2Q96F10 170 aaPredicted RBP11.68□□□□□ -0.54
CCND1-205ENST00000542367 PFDN5Q99471 154 aa11.68□□□□□ -0.54
CCND1-205ENST00000542367 SLC39A9Q9NUM3 307 aa11.68□□□□□ -0.54
CCND1-205ENST00000542367 INMT-MINDY4F8WBC2 141 aa11.67□□□□□ -0.54
CCND1-205ENST00000542367 HTN3P15516 51 aa11.67□□□□□ -0.54
CCND1-205ENST00000542367 FGF7P21781 194 aa11.67□□□□□ -0.54
CCND1-205ENST00000542367 NHLH2Q02577 135 aa11.67□□□□□ -0.54
CCND1-205ENST00000542367 CHAC2Q8WUX2 184 aa11.67□□□□□ -0.54
CCND1-205ENST00000542367 LINC01587Q99440 93 aa11.67□□□□□ -0.54
CCND1-205ENST00000542367 PXMP4Q9Y6I8 212 aa11.67□□□□□ -0.54
CCND1-205ENST00000542367 PRAC2D3DTV9 90 aa11.66□□□□□ -0.54
CCND1-205ENST00000542367 RLN2P04090 185 aa11.66□□□□□ -0.54
CCND1-205ENST00000542367 AZU1P20160 251 aa11.66□□□□□ -0.54
CCND1-205ENST00000542367 DAD1P61803 113 aa11.66□□□□□ -0.54
CCND1-205ENST00000542367 NMES1Q9C002 83 aa11.66□□□□□ -0.54
CCND1-205ENST00000542367 E5RGE8 158 aa11.65□□□□□ -0.54
CCND1-205ENST00000542367 PRAF2O60831 178 aa11.65□□□□□ -0.54
CCND1-205ENST00000542367 P0DMU3 169 aa11.65□□□□□ -0.54
CCND1-205ENST00000542367 FAM231AP0DMU4 169 aa11.65□□□□□ -0.54
CCND1-205ENST00000542367 FAM231CP0DMU5 169 aa11.65□□□□□ -0.54
CCND1-205ENST00000542367 CDKN1BP46527 198 aa11.65□□□□□ -0.54
CCND1-205ENST00000542367 GUK1Q16774 197 aa11.65□□□□□ -0.54
CCND1-205ENST00000542367 LRRC37A5PQ49AS3 106 aa11.65□□□□□ -0.54
CCND1-205ENST00000542367 FAM210BQ96KR6 192 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms