RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 L7N2F9 121 aa11.09□□□□□ -0.63
VPS33A-206ENST00000542310 GOSR2O14653 212 aa11.09□□□□□ -0.63
VPS33A-206ENST00000542310 AGPAT2O15120 278 aa11.09□□□□□ -0.63
VPS33A-206ENST00000542310 PLA2G10O15496 165 aa11.09□□□□□ -0.63
VPS33A-206ENST00000542310 VAMP2P63027 116 aa11.09□□□□□ -0.63
VPS33A-206ENST00000542310 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
VPS33A-206ENST00000542310 ARL16Q0P5N6 197 aa11.09□□□□□ -0.63
VPS33A-206ENST00000542310 PSG3Q16557 428 aa11.09□□□□□ -0.63
VPS33A-206ENST00000542310 LGALS9BQ3B8N2 356 aa11.09□□□□□ -0.63
VPS33A-206ENST00000542310 BAP18Q8IXM2 172 aa11.09□□□□□ -0.63
VPS33A-206ENST00000542310 NACAE9PAV3 2078 aa11.08□□□□□ -0.63
VPS33A-206ENST00000542310 TCRBP04435 133 aa11.08□□□□□ -0.64
VPS33A-206ENST00000542310 RNF212Q495C1 297 aa11.08□□□□□ -0.64
VPS33A-206ENST00000542310 LINC00305Q7Z4B0 112 aa11.08□□□□□ -0.64
VPS33A-206ENST00000542310 BPIFA4PQ86YQ2 179 aa11.08□□□□□ -0.64
VPS33A-206ENST00000542310 UBE2DNLQ8IWF7 75 aa11.08□□□□□ -0.64
VPS33A-206ENST00000542310 C15orf53Q8NAA6 179 aa11.08□□□□□ -0.64
VPS33A-206ENST00000542310 LRRC20Q8TCA0 184 aa11.08□□□□□ -0.64
VPS33A-206ENST00000542310 ZNF431Q8TF32 576 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-206ENST00000542310 MGST2Q99735 147 aa11.08□□□□□ -0.64
VPS33A-206ENST00000542310 CCDC32Q9BV29 185 aa11.08□□□□□ -0.64
VPS33A-206ENST00000542310 ZNF331Q9NQX6 463 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-206ENST00000542310 DNAH2Q9P225 4427 aa11.07□□□□□ -0.64
VPS33A-206ENST00000542310 CCSO14618 274 aa11.07□□□□□ -0.64
VPS33A-206ENST00000542310 COX7A2P2O60397 106 aa11.07□□□□□ -0.64
VPS33A-206ENST00000542310 NUDT15Q9NV35 164 aa11.07□□□□□ -0.64
VPS33A-206ENST00000542310 PKHD1P08F94 4074 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 PLAC8L1A1L4L8 177 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 ZNF705GA8MUZ8 300 aaPredicted RBP11.06□□□□□ -0.64
VPS33A-206ENST00000542310 HTN3P15516 51 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 CDKN1BP46527 198 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 FAM3BP58499 235 aaPredicted RBP11.06□□□□□ -0.64
VPS33A-206ENST00000542310 TAS2R60P59551 318 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 RHOBP62745 196 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 RAB31Q13636 194 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 TMEM88Q6PEY1 159 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 RPUSD4Q96CM3 377 aaKnown RBP11.06□□□□□ -0.64
VPS33A-206ENST00000542310 C16orf74Q96GX8 76 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 C11orf1Q9H5F2 150 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 PPP1R14DQ9NXH3 145 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 LSM5Q9Y4Y9 91 aaKnown RBP11.06□□□□□ -0.64
VPS33A-206ENST00000542310 PXMP4Q9Y6I8 212 aa11.06□□□□□ -0.64
VPS33A-206ENST00000542310 DNAH17Q9UFH2 4485 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 TRAV12-2A0A075B6T6 113 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 TRAV6A0A075B6T7 132 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 FAM25EA8MYX2 175 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 IGLC2P0DOY2 106 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 PVALBP20472 110 aaPredicted RBP11.05□□□□□ -0.64
VPS33A-206ENST00000542310 CAMLGP49069 296 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 CAV2P51636 162 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 VWC2Q2TAL6 325 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 C10orf113Q5VZT2 155 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 LINC00299Q6ZSB3 139 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 TMEM37Q8WXS4 190 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 C2orf50Q96LR7 162 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 PLA2G2EQ9NZK7 142 aa11.05□□□□□ -0.64
VPS33A-206ENST00000542310 A0A1B0GVY2 172 aa11.04□□□□□ -0.64
VPS33A-206ENST00000542310 C5orf51A6NDU8 294 aa11.04□□□□□ -0.64
VPS33A-206ENST00000542310 BCAP31P51572 246 aa11.04□□□□□ -0.64
VPS33A-206ENST00000542310 OPCMLQ14982 345 aa11.04□□□□□ -0.64
VPS33A-206ENST00000542310 Q6ZRG5 221 aa11.04□□□□□ -0.64
VPS33A-206ENST00000542310 C12orf45Q8N5I9 185 aaPredicted RBP11.04□□□□□ -0.64
VPS33A-206ENST00000542310 OR1L4Q8NGR5 311 aa11.04□□□□□ -0.64
VPS33A-206ENST00000542310 PFDN5Q99471 154 aa11.04□□□□□ -0.64
VPS33A-206ENST00000542310 SEC22CQ9BRL7 303 aa11.04□□□□□ -0.64
VPS33A-206ENST00000542310 LYRM2Q9NU23 88 aaPredicted RBP11.04□□□□□ -0.64
VPS33A-206ENST00000542310 UQCC1Q9NVA1 299 aa11.04□□□□□ -0.64
VPS33A-206ENST00000542310 WDR83OSQ9Y284 106 aa11.04□□□□□ -0.64
VPS33A-206ENST00000542310 RTL8CO15255 209 aa11.03□□□□□ -0.64
VPS33A-206ENST00000542310 SULT1A1P50225 295 aa11.03□□□□□ -0.64
VPS33A-206ENST00000542310 GUK1Q16774 197 aa11.03□□□□□ -0.64
VPS33A-206ENST00000542310 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
VPS33A-206ENST00000542310 Q6ZR54 194 aa11.03□□□□□ -0.64
VPS33A-206ENST00000542310 NRARPQ7Z6K4 114 aa11.03□□□□□ -0.64
VPS33A-206ENST00000542310 TMEM263Q8WUH6 116 aaKnown RBP11.03□□□□□ -0.64
VPS33A-206ENST00000542310 CHAC2Q8WUX2 184 aa11.03□□□□□ -0.64
VPS33A-206ENST00000542310 ODF3Q96PU9 254 aa11.03□□□□□ -0.64
VPS33A-206ENST00000542310 LINC01587Q99440 93 aa11.03□□□□□ -0.64
VPS33A-206ENST00000542310 H7BYZ3 331 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 SLC17A3O00476 420 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 ZNF253O75346 499 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 CST7O76096 145 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 H2AFB2P0C5Z0 115 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 S100A11P31949 105 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 RPL29P47914 159 aaKnown RBP11.02□□□□□ -0.65
VPS33A-206ENST00000542310 HBG1P69891 147 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 HBG2P69892 147 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 MORN5Q5VZ52 161 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 STX12Q86Y82 276 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 OR10J6PQ8NGY7 276 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 RNASE8Q8TDE3 154 aaKnown RBP11.02□□□□□ -0.65
VPS33A-206ENST00000542310 DNAJC4Q9NNZ3 241 aa11.02□□□□□ -0.65
VPS33A-206ENST00000542310 UBE2L5PA0A1B0GUS4 154 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 FAM240BA0A1B0GVZ2 78 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 FAM24AA6NFZ4 105 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 PRSS29PA6NIE9 313 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 M0R2N4 97 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 PRM2P04554 102 aa11.01□□□□□ -0.65
VPS33A-206ENST00000542310 ATP5G1P05496 136 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms