RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 DIAPH2-AS1Q14236 149 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 C8orf46Q8TAG6 207 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 GAFA1Q96PS6 74 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 TTTY13Q9BZ97 58 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 DKK2Q9UBU2 259 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 INSIG2Q9Y5U4 225 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 FTH1P19P0C7X4 201 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 CRYBA4P53673 196 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 PCSK5Q92824 1860 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 FSTL3O95633 263 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 APOBEC3AP31941 199 aaPredicted RBP10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 DPF1Q92782 380 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 PSG8Q9UQ74 426 aa10.25□□□□□ -0.77
SFSWAP-209ENST00000540469 A0A1B0GW15 77 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 NKX2-8O15522 239 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 RPL27AP46776 148 aaKnown RBP10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 FXYD2P54710 66 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 RUSC1-AS1Q66K80 236 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 LYZL1Q6UWQ5 148 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 TRGV9Q99603 122 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 RASL11BQ9BPW5 248 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 CFAP47Q6ZTR5 3102 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 TMEM189A5PLL7 270 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 CKS1BP61024 79 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 CCL8P80075 99 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 C1orf162Q8NEQ5 155 aaPredicted RBP10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 SPTBN4Q9H254 2564 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 CEP295Q9C0D2 2601 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 NPIPB6E9PJ23 425 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 TM4SF5O14894 197 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 TWIST1Q15672 202 aa10.24□□□□□ -0.77
SFSWAP-209ENST00000540469 GAGE12HA6NDE8 117 aa10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 SIVA1O15304 175 aa10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 ZNF833PQ6ZTB9 187 aa10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 SLC25A39Q9BZJ4 359 aaPredicted RBP10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 PLGLAQ15195 96 aa10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 ATP6V0BQ99437 205 aa10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 CHAC1Q9BUX1 264 aa10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 M0R3E3 92 aa10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 CCL11P51671 97 aa10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 Q6AWC8 147 aa10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 VGLL1Q99990 258 aa10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 LINC00312Q9Y6C7 94 aa10.23□□□□□ -0.77
SFSWAP-209ENST00000540469 CGB1A6NKQ9 187 aa10.22□□□□□ -0.77
SFSWAP-209ENST00000540469 ETDBQ3ZM63 59 aa10.22□□□□□ -0.77
SFSWAP-209ENST00000540469 A0A096LNJ9 63 aa10.22□□□□□ -0.77
SFSWAP-209ENST00000540469 LHBP01229 141 aa10.22□□□□□ -0.77
SFSWAP-209ENST00000540469 IGLV1-44P01699 117 aa10.22□□□□□ -0.77
SFSWAP-209ENST00000540469 ABHD17AQ96GS6 310 aa10.22□□□□□ -0.77
SFSWAP-209ENST00000540469 C17orf77Q96MU5 243 aa10.22□□□□□ -0.77
SFSWAP-209ENST00000540469 SCNM1Q9BWG6 230 aa10.22□□□□□ -0.77
SFSWAP-209ENST00000540469 WFDC2Q14508 124 aa10.21□□□□□ -0.77
SFSWAP-209ENST00000540469 CD300EQ496F6 205 aaPredicted RBP10.21□□□□□ -0.77
SFSWAP-209ENST00000540469 GTSCR1Q86UQ5 136 aa10.21□□□□□ -0.77
SFSWAP-209ENST00000540469 NDUFS7O75251 213 aa10.21□□□□□ -0.77
SFSWAP-209ENST00000540469 TMEM30BQ3MIR4 351 aa10.21□□□□□ -0.77
SFSWAP-209ENST00000540469 FAM104BQ5XKR9 115 aa10.21□□□□□ -0.77
SFSWAP-209ENST00000540469 C8orf49Q96NF6 230 aa10.21□□□□□ -0.77
SFSWAP-209ENST00000540469 ZFHX4Q86UP3 3567 aa10.21□□□□□ -0.77
SFSWAP-209ENST00000540469 GLRXP35754 106 aa10.21□□□□□ -0.78
SFSWAP-209ENST00000540469 ATP5G2Q06055 141 aa10.21□□□□□ -0.78
SFSWAP-209ENST00000540469 MRPL51Q4U2R6 128 aaKnown RBP10.21□□□□□ -0.78
SFSWAP-209ENST00000540469 SH2D6Q7Z4S9 175 aa10.21□□□□□ -0.78
SFSWAP-209ENST00000540469 NPYP01303 97 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 PIP4P2Q8N4L2 257 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 ARPC1AQ92747 370 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 ZNF479Q96JC4 524 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 SRSF8Q9BRL6 282 aaKnown RBP10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 TMEM133Q9H2Q1 129 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 AAMDCQ9H7C9 122 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 NGBQ9NPG2 151 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 DSCAML1Q8TD84 2053 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 BOD1L1Q8NFC6 3051 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 WNK2Q9Y3S1 2297 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 FOXC2Q99958 501 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 PRR33A8MZF0 331 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 H3BMG7 143 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 IGLV2-11P01706 119 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 IGHV1-46P01743 117 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 LEPP41159 167 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 AMTNQ6UX39 209 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 ZNF71Q9NQZ8 489 aaPredicted RBP10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 TMEM160Q9NX00 188 aa10.2□□□□□ -0.78
SFSWAP-209ENST00000540469 PRB3Q04118 309 aaPredicted RBP10.19□□□□□ -0.78
SFSWAP-209ENST00000540469 RITA1Q96K30 269 aa10.19□□□□□ -0.78
SFSWAP-209ENST00000540469 MAP1LC3AQ9H492 121 aa10.19□□□□□ -0.78
SFSWAP-209ENST00000540469 SLC25A15Q9Y619 301 aa10.19□□□□□ -0.78
SFSWAP-209ENST00000540469 POLEQ07864 2286 aa10.19□□□□□ -0.78
SFSWAP-209ENST00000540469 INS-IGF2F8WCM5 200 aa10.19□□□□□ -0.78
SFSWAP-209ENST00000540469 CNIH1O95406 144 aa10.19□□□□□ -0.78
SFSWAP-209ENST00000540469 IGKV2D-26A0A0A0MRZ7 120 aa10.18□□□□□ -0.78
SFSWAP-209ENST00000540469 ZC2HC1BQ5TFG8 222 aa10.18□□□□□ -0.78
SFSWAP-209ENST00000540469 SCGB1A1P11684 91 aa10.18□□□□□ -0.78
SFSWAP-209ENST00000540469 EVI2AP22794 236 aa10.18□□□□□ -0.78
SFSWAP-209ENST00000540469 MC5RP33032 325 aa10.18□□□□□ -0.78
SFSWAP-209ENST00000540469 CCDC144NLQ6NUI1 221 aa10.18□□□□□ -0.78
SFSWAP-209ENST00000540469 TMEM75Q8N9X5 138 aa10.18□□□□□ -0.78
SFSWAP-209ENST00000540469 CCL17Q92583 94 aa10.18□□□□□ -0.78
SFSWAP-209ENST00000540469 HIST1H4GQ99525 98 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms