RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 LINC01551Q86U37 167 aa13.19□□□□□ -0.3
COPS3-212ENST00000539941 ZNF738Q8NE65 137 aa13.19□□□□□ -0.3
COPS3-212ENST00000539941 TMEM167BQ9NRX6 74 aa13.19□□□□□ -0.3
COPS3-212ENST00000539941 ARL2-SNX15V9GYD0 113 aa13.19□□□□□ -0.3
COPS3-212ENST00000539941 CD5LO43866 347 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 HYPMO75409 117 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 PSG1P11464 419 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 RPL15P61313 204 aaKnown RBP13.18□□□□□ -0.3
COPS3-212ENST00000539941 RHOGP84095 191 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 Q56UQ5 140 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 PATE2Q6UY27 113 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 KLHDC1Q8N7A1 406 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 ATP6V0BQ99437 205 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 FAM223BA6NKX1 122 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 F8W735 103 aaPredicted RBP13.18□□□□□ -0.3
COPS3-212ENST00000539941 FOXL1Q12952 345 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 BATFQ16520 125 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 FAM223AQ8IWN6 122 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 OR1B1Q8NGR6 318 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 ALKBH7Q9BT30 221 aaPredicted RBP13.18□□□□□ -0.3
COPS3-212ENST00000539941 ZNF355PQ9NSJ1 428 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 CDC42EP3Q9UKI2 254 aa13.18□□□□□ -0.3
COPS3-212ENST00000539941 PAGE4O60829 102 aa13.17□□□□□ -0.3
COPS3-212ENST00000539941 ORM2P19652 201 aa13.17□□□□□ -0.3
COPS3-212ENST00000539941 BLCAPP62952 87 aa13.17□□□□□ -0.3
COPS3-212ENST00000539941 C15orf32Q32M92 178 aa13.17□□□□□ -0.3
COPS3-212ENST00000539941 STXBP6Q8NFX7 210 aa13.17□□□□□ -0.3
COPS3-212ENST00000539941 ZNF502Q8TBZ5 544 aa13.17□□□□□ -0.3
COPS3-212ENST00000539941 FAM167A-AS1Q96KT0 104 aa13.17□□□□□ -0.3
COPS3-212ENST00000539941 ZANQ9Y493 2812 aa13.17□□□□□ -0.3
COPS3-212ENST00000539941 OR7C2O60412 319 aa13.16□□□□□ -0.3
COPS3-212ENST00000539941 KRTAP1-1Q07627 177 aa13.16□□□□□ -0.3
COPS3-212ENST00000539941 LINC00305Q7Z4B0 112 aa13.16□□□□□ -0.3
COPS3-212ENST00000539941 SLC25A2Q9BXI2 301 aa13.16□□□□□ -0.3
COPS3-212ENST00000539941 HIGD1AQ9Y241 93 aa13.16□□□□□ -0.3
COPS3-212ENST00000539941 TRBV7-1A0A0A6YYK4 115 aa13.15□□□□□ -0.3
COPS3-212ENST00000539941 C11orf94C9JXX5 98 aa13.15□□□□□ -0.3
COPS3-212ENST00000539941 PPIFP30405 207 aaKnown RBP13.15□□□□□ -0.3
COPS3-212ENST00000539941 S100A7AQ86SG5 101 aa13.15□□□□□ -0.3
COPS3-212ENST00000539941 OR5AU1Q8NGC0 362 aa13.15□□□□□ -0.3
COPS3-212ENST00000539941 EEF1AKMT3Q96AZ1 226 aa13.15□□□□□ -0.3
COPS3-212ENST00000539941 ELOVL1Q9BW60 279 aa13.15□□□□□ -0.3
COPS3-212ENST00000539941 CCL25O15444 150 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 PDE6DO43924 150 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 LYZP61626 148 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 TMEM86BQ8N661 226 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 NUDT10Q8NFP7 164 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 OR4F5Q8NH21 305 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 ZNF503Q96F45 646 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 UHRF2Q96PU4 802 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 OR4F4Q96R69 305 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 SMR3AQ99954 134 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 ZNF586Q9NXT0 402 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 MRPL27Q9P0M9 148 aaKnown RBP13.15□□□□□ -0.31
COPS3-212ENST00000539941 MRPS16Q9Y3D3 137 aaKnown RBP13.15□□□□□ -0.31
COPS3-212ENST00000539941 S4R3C0 116 aa13.15□□□□□ -0.31
COPS3-212ENST00000539941 WI2-2373I1.2A0A1W2PRP0 233 aa13.14□□□□□ -0.31
COPS3-212ENST00000539941 CTSGP08311 255 aa13.14□□□□□ -0.31
COPS3-212ENST00000539941 SUMO1P63165 101 aaKnown RBP13.14□□□□□ -0.31
COPS3-212ENST00000539941 ATP5G2Q06055 141 aa13.14□□□□□ -0.31
COPS3-212ENST00000539941 MORN5Q5VZ52 161 aa13.14□□□□□ -0.31
COPS3-212ENST00000539941 ZNF491Q8N8L2 437 aa13.14□□□□□ -0.31
COPS3-212ENST00000539941 RNF125Q96EQ8 232 aa13.14□□□□□ -0.31
COPS3-212ENST00000539941 LAMTOR2Q9Y2Q5 125 aa13.14□□□□□ -0.31
COPS3-212ENST00000539941 COX11Q9Y6N1 276 aa13.14□□□□□ -0.31
COPS3-212ENST00000539941 HOXA3O43365 443 aaPredicted RBP13.13□□□□□ -0.31
COPS3-212ENST00000539941 HNRNPA3P51991 378 aaKnown RBP13.13□□□□□ -0.31
COPS3-212ENST00000539941 CST9LP1Q5W188 147 aa13.13□□□□□ -0.31
COPS3-212ENST00000539941 USMG5Q96IX5 58 aa13.13□□□□□ -0.31
COPS3-212ENST00000539941 NPFFR1Q9GZQ6 430 aa13.13□□□□□ -0.31
COPS3-212ENST00000539941 PARLQ9H300 379 aa13.13□□□□□ -0.31
COPS3-212ENST00000539941 LINC00527Q9UJ94 153 aa13.13□□□□□ -0.31
COPS3-212ENST00000539941 PAM16Q9Y3D7 125 aa13.13□□□□□ -0.31
COPS3-212ENST00000539941 TRAV5A0A0B4J249 113 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 ZNF320A2RRD8 509 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 OR2T8A6NH00 312 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 TRGV3P03979 118 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 UBE2L3P68036 154 aaKnown RBP13.12□□□□□ -0.31
COPS3-212ENST00000539941 RPL19P84098 196 aaKnown RBP13.12□□□□□ -0.31
COPS3-212ENST00000539941 CFHR3Q02985 330 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 Q0VG73 95 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 PET117Q6UWS5 81 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 Q6ZS46 218 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 Q6ZWC4 215 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 PAXXQ9BUH6 204 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 PRSS22Q9GZN4 317 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 A0A1W2PRE2 83 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 IGLV1-40P01703 118 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 IGHV3-23P01764 117 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 IL4P05112 153 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 SIGLECL1Q8N7X8 197 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 OR4C5Q8NGB2 326 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 CCDC140Q96MF4 163 aa13.12□□□□□ -0.31
COPS3-212ENST00000539941 SLC25A39Q9BZJ4 359 aaPredicted RBP13.12□□□□□ -0.31
COPS3-212ENST00000539941 YTHDF2Q9Y5A9 579 aaKnown RBP13.12□□□□□ -0.31
COPS3-212ENST00000539941 TMEM238LA0A1B0GVL6 79 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 TMEM89A2RUT3 159 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 S100A7P31151 101 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 GPR183P32249 361 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 ADMP35318 185 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms