RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 SMIM15Q7Z3B0 74 aa6.98□□□□□ -1.29
DDB1-213ENST00000539332 RAX2Q96IS3 184 aa6.98□□□□□ -1.29
DDB1-213ENST00000539332 FNDC4Q9H6D8 234 aaPredicted RBP6.98□□□□□ -1.29
DDB1-213ENST00000539332 MRPL27Q9P0M9 148 aaKnown RBP6.98□□□□□ -1.29
DDB1-213ENST00000539332 FBXL7Q9UJT9 491 aa6.98□□□□□ -1.29
DDB1-213ENST00000539332 F11RQ9Y624 299 aaKnown RBP6.98□□□□□ -1.29
DDB1-213ENST00000539332 COX11Q9Y6N1 276 aa6.98□□□□□ -1.29
DDB1-213ENST00000539332 TEP1Q99973 2627 aaKnown RBP6.98□□□□□ -1.29
DDB1-213ENST00000539332 IGKV1OR2-108A0A075B7D4 117 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 SNURFLB1AK76 121 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 ZNF324O75467 553 aaPredicted RBP6.97□□□□□ -1.29
DDB1-213ENST00000539332 HLA-DRB1P01911 266 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 FAM106CPP0CH98 169 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 AMTP48728 403 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 HES1Q14469 280 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 FAM162BQ5T6X4 162 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 RASL11AQ6T310 242 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 ZNF562Q6V9R5 426 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 Q8N976 141 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 Q8N9W7 124 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 BORCS7Q96B45 105 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 NRN1Q9NPD7 142 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 A0A1B0GUS0 222 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 ZNF561-AS1K7EIQ3 104 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 CORTO00230 105 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 PPBPP02775 128 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 LINC00869P0C866 280 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 CX3CL1P78423 397 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 PLGLAQ15195 96 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 KLK9Q2XQG4 91 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 TDRG1Q3Y452 100 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 FAM120AOSQ5T036 256 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 C9orf139Q6ZV77 190 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 THAP8Q8NA92 274 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 OCC1Q8TAD7 63 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 PIFOQ8TCI5 191 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 VCX2Q9H322 139 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 GNB4Q9HAV0 340 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 OSTCQ9NRP0 149 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 C1RLQ9NZP8 487 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 KLK9Q9UKQ9 250 aa6.97□□□□□ -1.29
DDB1-213ENST00000539332 NIPBLQ6KC79 2804 aaeCLIP6.97□□□□□ -1.29
DDB1-213ENST00000539332 SETD2Q9BYW2 2564 aaPredicted RBP6.96□□□□□ -1.29
DDB1-213ENST00000539332 TRAV30A0A087WSZ9 112 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 NPIPB5A8MRT5 1133 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 NDUFB8O95169 186 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 AMY1AP04745 511 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 ARL14EPLP0DKL9 152 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 TSPOP30536 169 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 IER3P46695 156 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 NDPQ00604 133 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 RAB31Q13636 194 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 FXYD3Q14802 87 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 BCL6BQ8N143 479 aaPredicted RBP6.96□□□□□ -1.3
DDB1-213ENST00000539332 TEX29Q8N6K0 151 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 STPG4Q8N801 248 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 DPF1Q92782 380 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 SMR3AQ99954 134 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 DERL1Q9BUN8 251 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 YAE1D1Q9NRH1 226 aa6.96□□□□□ -1.3
DDB1-213ENST00000539332 TRBV20OR9-2A0A075B6H5 130 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 IGKV1D-37A0A075B6S9 117 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 IGHV7-81A0A0B4J1V7 117 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 SCO2A0A1W2PP80 73 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 A0A1W2PS18 150 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 CCL25O15444 150 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 SCGB2A1O75556 95 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 GCHFRP30047 84 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 TFPI2P48307 235 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 MLANAQ16655 118 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 DEFB112Q30KQ8 113 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 KHDC1LQ5JSQ8 128 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 ASPHD1Q5U4P2 390 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 MIC13Q5XKP0 118 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 STPG3Q8N7X2 389 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 TMEM116Q8NCL8 245 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 SSMEM1Q8WWF3 244 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 ARPC1AQ92747 370 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 ALKBH7Q9BT30 221 aaPredicted RBP6.95□□□□□ -1.3
DDB1-213ENST00000539332 TMEM167BQ9NRX6 74 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 NAT8BQ9UHF3 227 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 V9GYV3 84 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 FN1P02751 2386 aaKnown RBP6.95□□□□□ -1.3
DDB1-213ENST00000539332 TRAV9-2A0A087WT02 112 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 PSMB11A5LHX3 300 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 I3L2K1 104 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 ISLRO14498 428 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 CNIH1O95406 144 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 LY6G6DO95868 133 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 EGR2P11161 476 aaPredicted RBP6.95□□□□□ -1.3
DDB1-213ENST00000539332 GNG4P50150 75 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 TIGITQ495A1 244 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 TMEM136Q6ZRR5 245 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 IL17RELQ6ZVW7 336 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 OR4C5Q8NGB2 326 aa6.95□□□□□ -1.3
DDB1-213ENST00000539332 RNASE8Q8TDE3 154 aaKnown RBP6.95□□□□□ -1.3
DDB1-213ENST00000539332 WIPF2Q8TF74 440 aaPredicted RBP6.95□□□□□ -1.3
DDB1-213ENST00000539332 MRPL36Q9P0J6 103 aaKnown RBP6.95□□□□□ -1.3
DDB1-213ENST00000539332 NCBP2LA6PVI3 153 aaKnown RBP6.94□□□□□ -1.3
DDB1-213ENST00000539332 CYSRT1A8MQ03 144 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms