RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 RPP25LQ8N5L8 163 aaKnown RBP10.76□□□□□ -0.69
LRRK1-211ENST00000538064 ZNF709Q8N972 641 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 OR1L4Q8NGR5 311 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 LINC00052Q96N35 136 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 CLUHP3Q96NS8 147 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 ATP5SQ99766 215 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 SHANK2-AS3Q9BTD1 123 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 ARV1Q9H2C2 271 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 SLC25A32Q9H2D1 315 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 KCNIP2Q9NS61 270 aa10.76□□□□□ -0.69
LRRK1-211ENST00000538064 TRAV10A0A0B4J240 114 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 IFNA5P01569 189 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 RPL7P18124 248 aaKnown RBP10.75□□□□□ -0.69
LRRK1-211ENST00000538064 DEFB1P60022 68 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 B2MP61769 119 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 PRR20EP86478 221 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 PRR20CP86479 221 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 PRR20DP86480 221 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 PRR20BP86481 221 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 PRR20AP86496 221 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 SPATA31B1PQ5VZV4 182 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 MIC13Q5XKP0 118 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 PFDN5Q99471 154 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 NEU1Q99519 415 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 SCRT1Q9BWW7 348 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 WDR61Q9GZS3 305 aaKnown RBP10.75□□□□□ -0.69
LRRK1-211ENST00000538064 PXMP4Q9Y6I8 212 aa10.75□□□□□ -0.69
LRRK1-211ENST00000538064 C17orf112F2Z3M2 114 aa10.74□□□□□ -0.69
LRRK1-211ENST00000538064 C10orf113Q5VZT2 155 aa10.74□□□□□ -0.69
LRRK1-211ENST00000538064 LINC00305Q7Z4B0 112 aa10.74□□□□□ -0.69
LRRK1-211ENST00000538064 INO80EQ8NBZ0 244 aaPredicted RBP10.74□□□□□ -0.69
LRRK1-211ENST00000538064 OR2T35Q8NGX2 323 aa10.74□□□□□ -0.69
LRRK1-211ENST00000538064 SCGB1C1Q8TD33 95 aa10.74□□□□□ -0.69
LRRK1-211ENST00000538064 NPCDR1Q9BY65 106 aa10.74□□□□□ -0.69
LRRK1-211ENST00000538064 SMIM3Q9BZL3 60 aa10.74□□□□□ -0.69
LRRK1-211ENST00000538064 DNAJC4Q9NNZ3 241 aa10.74□□□□□ -0.69
LRRK1-211ENST00000538064 SLC39A9Q9NUM3 307 aa10.74□□□□□ -0.69
LRRK1-211ENST00000538064 APLNQ9ULZ1 77 aa10.74□□□□□ -0.69
LRRK1-211ENST00000538064 CELA1Q9UNI1 258 aa10.74□□□□□ -0.69
LRRK1-211ENST00000538064 ZNF705FA8MVS1 300 aaPredicted RBP10.73□□□□□ -0.69
LRRK1-211ENST00000538064 IGLL5B9A064 214 aa10.73□□□□□ -0.69
LRRK1-211ENST00000538064 IGKV3-20P01619 116 aa10.73□□□□□ -0.69
LRRK1-211ENST00000538064 ZNF705DP0CH99 300 aaPredicted RBP10.73□□□□□ -0.69
LRRK1-211ENST00000538064 ZNF705BP0CI00 300 aaPredicted RBP10.73□□□□□ -0.69
LRRK1-211ENST00000538064 PATE2Q6UY27 113 aa10.73□□□□□ -0.69
LRRK1-211ENST00000538064 AQP10Q96PS8 301 aa10.73□□□□□ -0.69
LRRK1-211ENST00000538064 UHRF2Q96PU4 802 aa10.73□□□□□ -0.69
LRRK1-211ENST00000538064 RSG1Q9BU20 258 aa10.73□□□□□ -0.69
LRRK1-211ENST00000538064 A0A0J9YX75 114 aa10.72□□□□□ -0.69
LRRK1-211ENST00000538064 C12orf74Q32Q52 190 aa10.72□□□□□ -0.69
LRRK1-211ENST00000538064 EBLN2Q6P2I7 272 aa10.72□□□□□ -0.69
LRRK1-211ENST00000538064 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.72□□□□□ -0.69
LRRK1-211ENST00000538064 OR4B1Q8NGF8 309 aa10.72□□□□□ -0.69
LRRK1-211ENST00000538064 TMEM37Q8WXS4 190 aa10.72□□□□□ -0.69
LRRK1-211ENST00000538064 C16orf92Q96LL3 132 aa10.72□□□□□ -0.69
LRRK1-211ENST00000538064 C20orf173Q96LM9 149 aa10.72□□□□□ -0.69
LRRK1-211ENST00000538064 C17orf77Q96MU5 243 aa10.72□□□□□ -0.69
LRRK1-211ENST00000538064 RPRMQ9NS64 109 aa10.72□□□□□ -0.69
LRRK1-211ENST00000538064 IGHV4-4A0A075B6R2 117 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 FXYD6-FXYD2A0A087WZ82 144 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 SMIM9A6NGZ8 99 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 A8MTW9 85 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 F6UB75 175 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 AMBPP02760 352 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 FXYD7P58549 80 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 PSG9Q00887 426 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 ZNF266Q14584 549 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 Q5BKY6 102 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 FAM78BQ5VT40 261 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 BPIFA4PQ86YQ2 179 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 PARD6GQ9BYG4 376 aaPredicted RBP10.71□□□□□ -0.69
LRRK1-211ENST00000538064 SLC35B3Q9H1N7 401 aa10.71□□□□□ -0.69
LRRK1-211ENST00000538064 HECTD4Q9Y4D8 3996 aa10.71□□□□□ -0.7
LRRK1-211ENST00000538064 TMEM189A5PLL7 270 aa10.7□□□□□ -0.7
LRRK1-211ENST00000538064 RFNGQ9Y644 331 aa10.7□□□□□ -0.7
LRRK1-211ENST00000538064 DEFB131BA0A096LNP1 70 aa10.69□□□□□ -0.7
LRRK1-211ENST00000538064 ZNF767PQ75MW2 155 aa10.69□□□□□ -0.7
LRRK1-211ENST00000538064 LRRC20Q8TCA0 184 aa10.69□□□□□ -0.7
LRRK1-211ENST00000538064 GOLT1BQ9Y3E0 138 aa10.69□□□□□ -0.7
LRRK1-211ENST00000538064 IGHV3OR16-12A0A075B7B8 117 aa10.68□□□□□ -0.7
LRRK1-211ENST00000538064 A0A087X0K7 114 aa10.68□□□□□ -0.7
LRRK1-211ENST00000538064 TEX48A0A1B0GUV7 120 aa10.68□□□□□ -0.7
LRRK1-211ENST00000538064 AMTNQ6UX39 209 aa10.68□□□□□ -0.7
LRRK1-211ENST00000538064 WFDC1Q9HC57 220 aa10.68□□□□□ -0.7
LRRK1-211ENST00000538064 TNFSF18Q9UNG2 199 aa10.68□□□□□ -0.7
LRRK1-211ENST00000538064 TRAV8-2A0A0B4J237 113 aa10.67□□□□□ -0.7
LRRK1-211ENST00000538064 SPART-AS1P0CW21 52 aa10.67□□□□□ -0.7
LRRK1-211ENST00000538064 CXCL2P19875 107 aa10.67□□□□□ -0.7
LRRK1-211ENST00000538064 C1orf158Q8N1D5 194 aa10.67□□□□□ -0.7
LRRK1-211ENST00000538064 MRPL32Q9BYC8 188 aaKnown RBP10.67□□□□□ -0.7
LRRK1-211ENST00000538064 RNF222A6NCQ9 220 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 MRPS12O15235 138 aaKnown RBP10.66□□□□□ -0.7
LRRK1-211ENST00000538064 DUSP14O95147 198 aaKnown RBP10.66□□□□□ -0.7
LRRK1-211ENST00000538064 HBE1P02100 147 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 EMP1P54849 157 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 GUK1Q16774 197 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 FFAR4Q5NUL3 377 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 MORN5Q5VZ52 161 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 LCN15Q6UWW0 184 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 Q6ZNX1 250 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms