RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 TSC22D2O75157 780 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 METTL15P1P0C7V9 234 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 MIFP14174 115 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 GATA2P23769 480 aaPredicted RBP5.09□□□□□ -1.59
YBX3-206ENST00000536823 S100A7P31151 101 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 ID1P41134 155 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 GALR1P47211 349 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 SELENOTP62341 195 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 ZNF846Q147U1 533 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 FOXI2Q6ZQN5 318 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 CYP2G1PQ6ZSU1 146 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 ZNF431Q8TF32 576 aaPredicted RBP5.09□□□□□ -1.59
YBX3-206ENST00000536823 PHLDA1Q8WV24 401 aaPredicted RBP5.09□□□□□ -1.59
YBX3-206ENST00000536823 S100ZQ8WXG8 99 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 GPR82Q96P67 336 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 SEC22CQ9BRL7 303 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 TMEM147Q9BVK8 224 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 C1QTNF4Q9BXJ3 329 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 MFFQ9GZY8 342 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 GSKIPQ9P0R6 139 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 TBC1D24Q9ULP9 559 aa5.09□□□□□ -1.59
YBX3-206ENST00000536823 KLK5Q9Y337 293 aaPredicted RBP5.09□□□□□ -1.59
YBX3-206ENST00000536823 FAM240BA0A1B0GVZ2 78 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 C7orf66A4D0T2 115 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 K7EPK0 472 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 DEFB4AO15263 64 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 IL5P05113 134 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 LINC00869P0C866 280 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 RBMY1A1P0DJD3 496 aaKnown RBP5.08□□□□□ -1.6
YBX3-206ENST00000536823 RBMY1CP0DJD4 496 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 ORM2P19652 201 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 DEFB1P60022 68 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 PLP1P60201 277 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 NANOS2P60321 138 aaKnown RBP5.08□□□□□ -1.6
YBX3-206ENST00000536823 NUTF2P61970 127 aaKnown RBP5.08□□□□□ -1.6
YBX3-206ENST00000536823 RRAS2P62070 204 aaPredicted RBP5.08□□□□□ -1.6
YBX3-206ENST00000536823 ASAH1Q13510 395 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 RBMY1FQ15415 496 aaKnown RBP5.08□□□□□ -1.6
YBX3-206ENST00000536823 SPATA31B1PQ5VZV4 182 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 MZT2BQ6NZ67 158 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 TMEM182Q6ZP80 229 aaPredicted RBP5.08□□□□□ -1.6
YBX3-206ENST00000536823 C12orf45Q8N5I9 185 aaPredicted RBP5.08□□□□□ -1.6
YBX3-206ENST00000536823 CSNK1G2-AS1Q8NCQ2 148 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 OR10P1Q8NGE3 313 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 OR1B1Q8NGR6 318 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 C11orf45Q8TAV5 145 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 C17orf77Q96MU5 243 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 LINC00052Q96N35 136 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 SHANK2-AS3Q9BTD1 123 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 SCRT1Q9BWW7 348 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 SAV1Q9H4B6 383 aaPredicted RBP5.08□□□□□ -1.6
YBX3-206ENST00000536823 SLC25A22Q9H936 323 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 CLEC5AQ9NY25 188 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 PTTG2Q9NZH5 202 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 DOK5Q9P104 306 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 HIGD1AQ9Y241 93 aa5.08□□□□□ -1.6
YBX3-206ENST00000536823 A0A0J9YX75 114 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 C5orf51A6NDU8 294 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 A8MTW9 85 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 FAM25EA8MYX2 175 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 L7N2F9 121 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 HYPMO75409 117 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 VAMP2P63027 116 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 SLC38A11Q08AI6 406 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 ARL16Q0P5N6 197 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 GDF5OSQ5U4N7 250 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 TMEM88Q6PEY1 159 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 S100A7AQ86SG5 101 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 ZNF546Q86UE3 836 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 C2orf50Q96LR7 162 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 RSG1Q9BU20 258 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 GGACTQ9BVM4 153 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 SLC25A39Q9BZJ4 359 aaPredicted RBP5.07□□□□□ -1.6
YBX3-206ENST00000536823 HRH4Q9H3N8 390 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 C11orf1Q9H5F2 150 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 NPVFQ9HCQ7 196 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 RPRMQ9NS64 109 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 XCL2Q9UBD3 114 aa5.07□□□□□ -1.6
YBX3-206ENST00000536823 LSM5Q9Y4Y9 91 aaKnown RBP5.07□□□□□ -1.6
YBX3-206ENST00000536823 FRAS1Q86XX4 4008 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 A0A087X0K7 114 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 ZNF705FA8MVS1 300 aaPredicted RBP5.06□□□□□ -1.6
YBX3-206ENST00000536823 F6UB75 175 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 PRYO14603 147 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 DEDDO75618 318 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 UPK1BO75841 260 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 IGKV3-20P01619 116 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 OR5G3P0C626 314 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 ZNF705DP0CH99 300 aaPredicted RBP5.06□□□□□ -1.6
YBX3-206ENST00000536823 ZNF705BP0CI00 300 aaPredicted RBP5.06□□□□□ -1.6
YBX3-206ENST00000536823 RPL7P18124 248 aaKnown RBP5.06□□□□□ -1.6
YBX3-206ENST00000536823 CAV2P51636 162 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 PXDC1Q5TGL8 231 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 EBLN2Q6P2I7 272 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 GSG1LQ6UXU4 331 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 ZNF705AQ6ZN79 300 aaPredicted RBP5.06□□□□□ -1.6
YBX3-206ENST00000536823 ZNF709Q8N972 641 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 ENKURQ8TC29 256 aa5.06□□□□□ -1.6
YBX3-206ENST00000536823 UHRF2Q96PU4 802 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms