RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 ZNF586Q9NXT0 402 aa11.65□□□□□ -0.55
CNN1-202ENST00000535659 CXorf1O96002 111 aa11.64□□□□□ -0.55
CNN1-202ENST00000535659 OR10J4P0C629 311 aa11.64□□□□□ -0.55
CNN1-202ENST00000535659 ID1P41134 155 aa11.64□□□□□ -0.55
CNN1-202ENST00000535659 CMC4P56277 68 aaPredicted RBP11.64□□□□□ -0.55
CNN1-202ENST00000535659 FAM74A1Q5RGS3 127 aa11.64□□□□□ -0.55
CNN1-202ENST00000535659 SAMD13Q5VXD3 122 aa11.64□□□□□ -0.55
CNN1-202ENST00000535659 LCN15Q6UWW0 184 aa11.64□□□□□ -0.55
CNN1-202ENST00000535659 LRRC20Q8TCA0 184 aa11.64□□□□□ -0.55
CNN1-202ENST00000535659 MBD3L1Q8WWY6 194 aa11.64□□□□□ -0.55
CNN1-202ENST00000535659 SAT2Q96F10 170 aaPredicted RBP11.64□□□□□ -0.55
CNN1-202ENST00000535659 C16orf92Q96LL3 132 aa11.64□□□□□ -0.55
CNN1-202ENST00000535659 TRBV19A0A075B6N1 114 aa11.63□□□□□ -0.55
CNN1-202ENST00000535659 H3BTX0 84 aa11.63□□□□□ -0.55
CNN1-202ENST00000535659 SOCS3O14543 225 aa11.63□□□□□ -0.55
CNN1-202ENST00000535659 CD7P09564 240 aa11.63□□□□□ -0.55
CNN1-202ENST00000535659 H2AFB1P0C5Y9 115 aa11.63□□□□□ -0.55
CNN1-202ENST00000535659 ARL14EPLP0DKL9 152 aa11.63□□□□□ -0.55
CNN1-202ENST00000535659 TEX261Q6UWH6 196 aa11.63□□□□□ -0.55
CNN1-202ENST00000535659 GTSCR1Q86UQ5 136 aa11.63□□□□□ -0.55
CNN1-202ENST00000535659 SFT2D1Q8WV19 159 aa11.63□□□□□ -0.55
CNN1-202ENST00000535659 BLNKQ8WV28 456 aa11.63□□□□□ -0.55
CNN1-202ENST00000535659 SORL1Q92673 2214 aa11.62□□□□□ -0.55
CNN1-202ENST00000535659 MAP1LC3B2A6NCE7 125 aa11.62□□□□□ -0.55
CNN1-202ENST00000535659 ISLRO14498 428 aa11.62□□□□□ -0.55
CNN1-202ENST00000535659 SNRPD3P62318 126 aaKnown RBP11.62□□□□□ -0.55
CNN1-202ENST00000535659 UBE2L3P68036 154 aaKnown RBP11.62□□□□□ -0.55
CNN1-202ENST00000535659 FAM24BQ8N5W8 94 aa11.62□□□□□ -0.55
CNN1-202ENST00000535659 PRR25Q96S07 402 aa11.62□□□□□ -0.55
CNN1-202ENST00000535659 MAP1LC3BQ9GZQ8 125 aa11.62□□□□□ -0.55
CNN1-202ENST00000535659 NOTCH1P46531 2555 aa11.62□□□□□ -0.55
CNN1-202ENST00000535659 TRAV8-2A0A0B4J237 113 aa11.61□□□□□ -0.55
CNN1-202ENST00000535659 GCHFRP30047 84 aa11.61□□□□□ -0.55
CNN1-202ENST00000535659 PSMB3P49720 205 aa11.61□□□□□ -0.55
CNN1-202ENST00000535659 CD81P60033 236 aa11.61□□□□□ -0.55
CNN1-202ENST00000535659 PDE6HQ13956 83 aa11.61□□□□□ -0.55
CNN1-202ENST00000535659 Q8N1Y9 231 aa11.61□□□□□ -0.55
CNN1-202ENST00000535659 SUN5Q8TC36 379 aa11.61□□□□□ -0.55
CNN1-202ENST00000535659 SLC50A1Q9BRV3 221 aa11.61□□□□□ -0.55
CNN1-202ENST00000535659 ZNF331Q9NQX6 463 aaPredicted RBP11.61□□□□□ -0.55
CNN1-202ENST00000535659 ZNF705EA8MWA4 302 aaPredicted RBP11.6□□□□□ -0.55
CNN1-202ENST00000535659 SLC17A3O00476 420 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 ZNF253O75346 499 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 NDUFB4O95168 129 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 ZNF688P0C7X2 276 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 FGF8P55075 233 aaPredicted RBP11.6□□□□□ -0.55
CNN1-202ENST00000535659 PSG9Q00887 426 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 IGFL4Q6B9Z1 124 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 ZNF680Q8NEM1 530 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 LINC00052Q96N35 136 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 FAM110AQ9BQ89 295 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 TMEM167BQ9NRX6 74 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 UBQLN2Q9UHD9 624 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 OR11H12B2RN74 326 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 IFNA7P01567 189 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 DEFB131AP59861 70 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 RANP62826 216 aaKnown RBP11.6□□□□□ -0.55
CNN1-202ENST00000535659 ODF3L2Q3SX64 289 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 IQCF2Q8IXL9 164 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 TMPRSS5Q9H3S3 457 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 MAP6D1Q9H9H5 199 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 C19orf73Q9NVV2 129 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 CLEC5AQ9NY25 188 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 MEGF8Q7Z7M0 2845 aa11.6□□□□□ -0.55
CNN1-202ENST00000535659 TRAV1-1A0A0B4J248 108 aa11.59□□□□□ -0.55
CNN1-202ENST00000535659 BLOC1S1P78537 153 aa11.59□□□□□ -0.55
CNN1-202ENST00000535659 PSG3Q16557 428 aa11.59□□□□□ -0.55
CNN1-202ENST00000535659 PSMG4Q5JS54 123 aa11.59□□□□□ -0.55
CNN1-202ENST00000535659 LYPD1Q8N2G4 141 aa11.59□□□□□ -0.55
CNN1-202ENST00000535659 TEX46H3BTG2 121 aa11.58□□□□□ -0.56
CNN1-202ENST00000535659 APRG1Q8IVJ8 170 aa11.58□□□□□ -0.56
CNN1-202ENST00000535659 RNF182Q8N6D2 247 aa11.58□□□□□ -0.56
CNN1-202ENST00000535659 C20orf173Q96LM9 149 aa11.58□□□□□ -0.56
CNN1-202ENST00000535659 A0A1B0GV50 99 aa11.57□□□□□ -0.56
CNN1-202ENST00000535659 PRB2P02812 416 aaPredicted RBP11.57□□□□□ -0.56
CNN1-202ENST00000535659 HLA-DMBP28068 263 aa11.57□□□□□ -0.56
CNN1-202ENST00000535659 EXOC3-AS1Q8N2X6 119 aa11.57□□□□□ -0.56
CNN1-202ENST00000535659 AAMDCQ9H7C9 122 aa11.57□□□□□ -0.56
CNN1-202ENST00000535659 AURKAIP1Q9NWT8 199 aaPredicted RBP11.57□□□□□ -0.56
CNN1-202ENST00000535659 HBE1P02100 147 aa11.56□□□□□ -0.56
CNN1-202ENST00000535659 CCL20P78556 96 aa11.56□□□□□ -0.56
CNN1-202ENST00000535659 ICAM4Q14773 271 aa11.56□□□□□ -0.56
CNN1-202ENST00000535659 DEFB125Q8N687 156 aa11.56□□□□□ -0.56
CNN1-202ENST00000535659 Q9H3A6 140 aa11.56□□□□□ -0.56
CNN1-202ENST00000535659 PRELID1Q9Y255 219 aa11.56□□□□□ -0.56
CNN1-202ENST00000535659 A0A1W2PRE2 83 aa11.55□□□□□ -0.56
CNN1-202ENST00000535659 PGPA6NDG6 321 aa11.55□□□□□ -0.56
CNN1-202ENST00000535659 ZNF124Q15973 351 aa11.55□□□□□ -0.56
CNN1-202ENST00000535659 WFDC10AQ9H1F0 79 aa11.55□□□□□ -0.56
CNN1-202ENST00000535659 OTORQ9NRC9 128 aa11.55□□□□□ -0.56
CNN1-202ENST00000535659 ZNF705FA8MVS1 300 aaPredicted RBP11.55□□□□□ -0.56
CNN1-202ENST00000535659 ZNF738Q8NE65 137 aa11.55□□□□□ -0.56
CNN1-202ENST00000535659 RPUSD4Q96CM3 377 aaKnown RBP11.55□□□□□ -0.56
CNN1-202ENST00000535659 MRPL53Q96EL3 112 aaKnown RBP11.55□□□□□ -0.56
CNN1-202ENST00000535659 M0R3E3 92 aa11.54□□□□□ -0.56
CNN1-202ENST00000535659 PPT1P50897 306 aa11.54□□□□□ -0.56
CNN1-202ENST00000535659 SUMO1P63165 101 aaKnown RBP11.54□□□□□ -0.56
CNN1-202ENST00000535659 IFITM2Q01629 132 aa11.54□□□□□ -0.56
CNN1-202ENST00000535659 LYPD6BQ8NI32 183 aa11.54□□□□□ -0.56
CNN1-202ENST00000535659 CITED4Q96RK1 184 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms