RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 TIMM8BQ9Y5J9 83 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 TRAV12-2A0A075B6T6 113 aa9.41□□□□□ -0.9
CLSTN3-205ENST00000535452 H7BYZ3 331 aa9.41□□□□□ -0.9
CLSTN3-205ENST00000535452 TAS2R30P59541 319 aa9.41□□□□□ -0.9
CLSTN3-205ENST00000535452 CCDC190Q86UF4 302 aa9.41□□□□□ -0.9
CLSTN3-205ENST00000535452 BAP18Q8IXM2 172 aa9.41□□□□□ -0.9
CLSTN3-205ENST00000535452 RPUSD4Q96CM3 377 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-205ENST00000535452 C20orf144Q9BQM9 153 aa9.41□□□□□ -0.9
CLSTN3-205ENST00000535452 PLA2G2EQ9NZK7 142 aa9.41□□□□□ -0.9
CLSTN3-205ENST00000535452 A0A087X0K7 114 aa9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 CBY3A6NI87 242 aa9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 SNURFLB1AK76 121 aa9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 PRSS46E5RG02 174 aa9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 CXCL3P19876 107 aa9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 PLP1P60201 277 aa9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 SLC38A11Q08AI6 406 aa9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 IGFL4Q6B9Z1 124 aa9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 LINC00305Q7Z4B0 112 aa9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 C12orf45Q8N5I9 185 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 OR1L4Q8NGR5 311 aa9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 UHRF2Q96PU4 802 aa9.4□□□□□ -0.9
CLSTN3-205ENST00000535452 PMS2P5A8MQ11 134 aa9.39□□□□□ -0.91
CLSTN3-205ENST00000535452 FAM25EA8MYX2 175 aa9.39□□□□□ -0.91
CLSTN3-205ENST00000535452 ZNF701M0R085 212 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-205ENST00000535452 RLN2P04090 185 aa9.39□□□□□ -0.91
CLSTN3-205ENST00000535452 CAV2P51636 162 aa9.39□□□□□ -0.91
CLSTN3-205ENST00000535452 C10orf113Q5VZT2 155 aa9.39□□□□□ -0.91
CLSTN3-205ENST00000535452 AMTNQ6UX39 209 aa9.39□□□□□ -0.91
CLSTN3-205ENST00000535452 PFDN5Q99471 154 aa9.39□□□□□ -0.91
CLSTN3-205ENST00000535452 SRRQ9GZT4 340 aa9.39□□□□□ -0.91
CLSTN3-205ENST00000535452 PXMP4Q9Y6I8 212 aa9.39□□□□□ -0.91
CLSTN3-205ENST00000535452 C5orf51A6NDU8 294 aa9.38□□□□□ -0.91
CLSTN3-205ENST00000535452 A8MTW9 85 aa9.38□□□□□ -0.91
CLSTN3-205ENST00000535452 LEPP41159 167 aa9.38□□□□□ -0.91
CLSTN3-205ENST00000535452 OR5I1Q13606 314 aa9.38□□□□□ -0.91
CLSTN3-205ENST00000535452 GUK1Q16774 197 aa9.38□□□□□ -0.91
CLSTN3-205ENST00000535452 TMEM14EPQ6UXP3 125 aa9.38□□□□□ -0.91
CLSTN3-205ENST00000535452 TMEM182Q6ZP80 229 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-205ENST00000535452 STX12Q86Y82 276 aa9.38□□□□□ -0.91
CLSTN3-205ENST00000535452 TMEM263Q8WUH6 116 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-205ENST00000535452 C20orf85Q9H1P6 137 aa9.38□□□□□ -0.91
CLSTN3-205ENST00000535452 KMT2AQ03164 3969 aa9.38□□□□□ -0.91
CLSTN3-205ENST00000535452 TRAV8-2A0A0B4J237 113 aa9.37□□□□□ -0.91
CLSTN3-205ENST00000535452 K7EPK0 472 aa9.37□□□□□ -0.91
CLSTN3-205ENST00000535452 AGPAT2O15120 278 aa9.37□□□□□ -0.91
CLSTN3-205ENST00000535452 RTL8CO15255 209 aa9.37□□□□□ -0.91
CLSTN3-205ENST00000535452 CAMLGP49069 296 aa9.37□□□□□ -0.91
CLSTN3-205ENST00000535452 HBG1P69891 147 aa9.37□□□□□ -0.91
CLSTN3-205ENST00000535452 HBG2P69892 147 aa9.37□□□□□ -0.91
CLSTN3-205ENST00000535452 TTC32Q5I0X7 151 aa9.37□□□□□ -0.91
CLSTN3-205ENST00000535452 ZBTB8BQ8NAP8 495 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-205ENST00000535452 LSM5Q9Y4Y9 91 aaKnown RBP9.37□□□□□ -0.91
CLSTN3-205ENST00000535452 CRXO43186 299 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-205ENST00000535452 MITD1Q8WV92 249 aa9.36□□□□□ -0.91
CLSTN3-205ENST00000535452 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-205ENST00000535452 NOP10Q9NPE3 64 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-205ENST00000535452 UQCC1Q9NVA1 299 aa9.36□□□□□ -0.91
CLSTN3-205ENST00000535452 FLVCR2Q9UPI3 526 aa9.36□□□□□ -0.91
CLSTN3-205ENST00000535452 RCL1Q9Y2P8 373 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-205ENST00000535452 BAXQ07812 192 aa9.35□□□□□ -0.91
CLSTN3-205ENST00000535452 Q6ZR54 194 aa9.35□□□□□ -0.91
CLSTN3-205ENST00000535452 C6orf223Q8N319 242 aa9.35□□□□□ -0.91
CLSTN3-205ENST00000535452 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
CLSTN3-205ENST00000535452 DNAJC4Q9NNZ3 241 aa9.35□□□□□ -0.91
CLSTN3-205ENST00000535452 ZNF331Q9NQX6 463 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-205ENST00000535452 NBDYA0A0U1RRE5 68 aa9.34□□□□□ -0.91
CLSTN3-205ENST00000535452 A0A1B0GVY2 172 aa9.34□□□□□ -0.91
CLSTN3-205ENST00000535452 C16orf90A8MZG2 172 aa9.34□□□□□ -0.91
CLSTN3-205ENST00000535452 J3KRW8 73 aa9.34□□□□□ -0.91
CLSTN3-205ENST00000535452 M6PRP20645 277 aa9.34□□□□□ -0.91
CLSTN3-205ENST00000535452 S100A10P60903 97 aa9.34□□□□□ -0.91
CLSTN3-205ENST00000535452 BAK1Q16611 211 aa9.34□□□□□ -0.91
CLSTN3-205ENST00000535452 TIMM9Q9Y5J7 89 aa9.34□□□□□ -0.91
CLSTN3-205ENST00000535452 DNAH10Q8IVF4 4471 aa9.34□□□□□ -0.91
CLSTN3-205ENST00000535452 C7orf66A4D0T2 115 aa9.33□□□□□ -0.92
CLSTN3-205ENST00000535452 AZU1P20160 251 aa9.33□□□□□ -0.92
CLSTN3-205ENST00000535452 S100A11P31949 105 aa9.33□□□□□ -0.92
CLSTN3-205ENST00000535452 FCN2Q15485 313 aa9.33□□□□□ -0.92
CLSTN3-205ENST00000535452 SSX7Q7RTT5 188 aa9.33□□□□□ -0.92
CLSTN3-205ENST00000535452 NRARPQ7Z6K4 114 aa9.33□□□□□ -0.92
CLSTN3-205ENST00000535452 ZNF680Q8NEM1 530 aa9.33□□□□□ -0.92
CLSTN3-205ENST00000535452 PYGO2Q9BRQ0 406 aa9.33□□□□□ -0.92
CLSTN3-205ENST00000535452 FRAS1Q86XX4 4008 aa9.33□□□□□ -0.92
CLSTN3-205ENST00000535452 VPS13DQ5THJ4 4388 aa9.33□□□□□ -0.92
CLSTN3-205ENST00000535452 TRGV2A0A075B6R0 118 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 GAGE12BA1L429 117 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 CCNKO75909 580 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 GAGE7O76087 117 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 CST7O76096 145 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 MBPP02686 304 aaPredicted RBP9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 PRM2P04554 102 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 GAGE12FP0CL80 117 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 GAGE12GP0CL81 117 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 GAGE12IP0CL82 117 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 IL7P13232 177 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 RNF141Q8WVD5 230 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 ODF3Q96PU9 254 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 KCNIP2Q9NS61 270 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 PRELID1Q9Y255 219 aa9.32□□□□□ -0.92
CLSTN3-205ENST00000535452 TRAV6A0A075B6T7 132 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms