RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PRR20DP86480 221 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 PRR20BP86481 221 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 PRR20AP86496 221 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 HIST1H1AQ02539 215 aaPredicted RBP7.49□□□□□ -1.21
CAPN1-225ENST00000533704 RAB31Q13636 194 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 LINC00305Q7Z4B0 112 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 C1orf158Q8N1D5 194 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 OR11H7Q8NGC8 314 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 ENKURQ8TC29 256 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 NEU1Q99519 415 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 MGST2Q99735 147 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 GGACTQ9BVM4 153 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 PPP1R14DQ9NXH3 145 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 UBE2L5PA0A1B0GUS4 154 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 H3BTX0 84 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 PTTG1O95997 202 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 INSP01308 110 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 CAMLGP49069 296 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 RAB32Q13637 225 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 RRN3P1Q2M238 152 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 PXDC1Q5TGL8 231 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 FAM222AQ5U5X8 452 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 C10orf113Q5VZT2 155 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 MIC13Q5XKP0 118 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 AMTNQ6UX39 209 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 NRARPQ7Z6K4 114 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 CHAC2Q8WUX2 184 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 IGF2BP2-AS1Q96M15 143 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 UQCC1Q9NVA1 299 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 PLA2G2EQ9NZK7 142 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 RNF24Q9Y225 148 aa7.48□□□□□ -1.21
CAPN1-225ENST00000533704 EPPK1P58107 5090 aaKnown RBP7.48□□□□□ -1.21
CAPN1-225ENST00000533704 TRAV12-2A0A075B6T6 113 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 A0A087X0K7 114 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 IGSF23A1L1A6 192 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 ZNF705GA8MUZ8 300 aaPredicted RBP7.47□□□□□ -1.21
CAPN1-225ENST00000533704 AMBPP02760 352 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 CXCL3P19876 107 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 DEFA1P59665 94 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 DEFA3P59666 94 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 BAXQ07812 192 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 ASAH1Q13510 395 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 PSG3Q16557 428 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 Q6ZRG5 221 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 STX12Q86Y82 276 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 BAP18Q8IXM2 172 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 OR8A1Q8NGG7 326 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 RPUSD4Q96CM3 377 aaKnown RBP7.47□□□□□ -1.21
CAPN1-225ENST00000533704 NIPSNAP3BQ9BS92 247 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 RNF126Q9BV68 326 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 GPN1Q9HCN4 374 aaPredicted RBP7.47□□□□□ -1.21
CAPN1-225ENST00000533704 DKK2Q9UBU2 259 aa7.47□□□□□ -1.21
CAPN1-225ENST00000533704 YTHDF2Q9Y5A9 579 aaKnown RBP7.47□□□□□ -1.21
CAPN1-225ENST00000533704 A8MTW9 85 aa7.46□□□□□ -1.22
CAPN1-225ENST00000533704 MRPS12O15235 138 aaKnown RBP7.46□□□□□ -1.22
CAPN1-225ENST00000533704 SIX6O95475 246 aa7.46□□□□□ -1.22
CAPN1-225ENST00000533704 PRM2P04554 102 aa7.46□□□□□ -1.22
CAPN1-225ENST00000533704 SULT1A1P50225 295 aa7.46□□□□□ -1.22
CAPN1-225ENST00000533704 OPCMLQ14982 345 aa7.46□□□□□ -1.22
CAPN1-225ENST00000533704 MORN5Q5VZ52 161 aa7.46□□□□□ -1.22
CAPN1-225ENST00000533704 LCN15Q6UWW0 184 aa7.46□□□□□ -1.22
CAPN1-225ENST00000533704 BPIFA4PQ86YQ2 179 aa7.46□□□□□ -1.22
CAPN1-225ENST00000533704 TMEM37Q8WXS4 190 aa7.46□□□□□ -1.22
CAPN1-225ENST00000533704 NDUFAF3Q9BU61 184 aa7.46□□□□□ -1.22
CAPN1-225ENST00000533704 C11orf1Q9H5F2 150 aa7.46□□□□□ -1.22
CAPN1-225ENST00000533704 LYRM2Q9NU23 88 aaPredicted RBP7.46□□□□□ -1.22
CAPN1-225ENST00000533704 TRAV5A0A0B4J249 113 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 TEX48A0A1B0GUV7 120 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 UPK1BO75841 260 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 HTN1P15515 57 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 FGF7P21781 194 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 S100A11P31949 105 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 DAD1P61803 113 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 HBG1P69891 147 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 HBG2P69892 147 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 LRRC37A5PQ49AS3 106 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 SLC7A5P1Q8MH63 180 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 TMEM252Q8N6L7 170 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 OR1L4Q8NGR5 311 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 LINC01587Q99440 93 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 SLC50A1Q9BRV3 221 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 DNAJC4Q9NNZ3 241 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 WDR83OSQ9Y284 106 aa7.45□□□□□ -1.22
CAPN1-225ENST00000533704 SLC17A3O00476 420 aa7.44□□□□□ -1.22
CAPN1-225ENST00000533704 CRXO43186 299 aaPredicted RBP7.44□□□□□ -1.22
CAPN1-225ENST00000533704 CXCL2P19875 107 aa7.44□□□□□ -1.22
CAPN1-225ENST00000533704 B2MP61769 119 aa7.44□□□□□ -1.22
CAPN1-225ENST00000533704 UBE2DNLQ8IWF7 75 aa7.44□□□□□ -1.22
CAPN1-225ENST00000533704 PFDN5Q99471 154 aa7.44□□□□□ -1.22
CAPN1-225ENST00000533704 PARD6GQ9BYG4 376 aaPredicted RBP7.44□□□□□ -1.22
CAPN1-225ENST00000533704 ZNF331Q9NQX6 463 aaPredicted RBP7.44□□□□□ -1.22
CAPN1-225ENST00000533704 SLC39A9Q9NUM3 307 aa7.44□□□□□ -1.22
CAPN1-225ENST00000533704 PXMP4Q9Y6I8 212 aa7.44□□□□□ -1.22
CAPN1-225ENST00000533704 PRAC2D3DTV9 90 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 INMT-MINDY4F8WBC2 141 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 H3BQ15 152 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 J3KRW8 73 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 RLN2P04090 185 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 IFITM3Q01628 133 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 IL15RAQ13261 267 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms