RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 MPDU1O75352 247 aa12.78□□□□□ -0.36
SMG1-203ENST00000532700 GIPP09681 153 aaPredicted RBP12.78□□□□□ -0.36
SMG1-203ENST00000532700 OR5G3P0C626 314 aa12.78□□□□□ -0.36
SMG1-203ENST00000532700 ZNF705DP0CH99 300 aaPredicted RBP12.78□□□□□ -0.36
SMG1-203ENST00000532700 ZNF705BP0CI00 300 aaPredicted RBP12.78□□□□□ -0.36
SMG1-203ENST00000532700 FAM78BQ5VT40 261 aa12.78□□□□□ -0.36
SMG1-203ENST00000532700 Q6ZRG5 221 aa12.78□□□□□ -0.36
SMG1-203ENST00000532700 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
SMG1-203ENST00000532700 OR4B1Q8NGF8 309 aa12.78□□□□□ -0.36
SMG1-203ENST00000532700 C2CD4CQ8TF44 421 aa12.78□□□□□ -0.36
SMG1-203ENST00000532700 GPR82Q96P67 336 aa12.78□□□□□ -0.36
SMG1-203ENST00000532700 UHRF2Q96PU4 802 aa12.78□□□□□ -0.36
SMG1-203ENST00000532700 ARL6Q9H0F7 186 aa12.78□□□□□ -0.36
SMG1-203ENST00000532700 IGLL5B9A064 214 aa12.77□□□□□ -0.37
SMG1-203ENST00000532700 FGF7P21781 194 aa12.77□□□□□ -0.37
SMG1-203ENST00000532700 RPL12P30050 165 aaKnown RBP12.77□□□□□ -0.37
SMG1-203ENST00000532700 LGALS9CQ6DKI2 356 aa12.77□□□□□ -0.37
SMG1-203ENST00000532700 AMTNQ6UX39 209 aa12.77□□□□□ -0.37
SMG1-203ENST00000532700 PATE2Q6UY27 113 aa12.77□□□□□ -0.37
SMG1-203ENST00000532700 CHAC2Q8WUX2 184 aa12.77□□□□□ -0.37
SMG1-203ENST00000532700 SLC25A39Q9BZJ4 359 aaPredicted RBP12.77□□□□□ -0.37
SMG1-203ENST00000532700 IGHV3OR16-12A0A075B7B8 117 aa12.76□□□□□ -0.37
SMG1-203ENST00000532700 ISLRO14498 428 aa12.76□□□□□ -0.37
SMG1-203ENST00000532700 GALR1P47211 349 aa12.76□□□□□ -0.37
SMG1-203ENST00000532700 RPL29P47914 159 aaKnown RBP12.76□□□□□ -0.37
SMG1-203ENST00000532700 CLINT1Q14677 625 aa12.76□□□□□ -0.37
SMG1-203ENST00000532700 C1orf158Q8N1D5 194 aa12.76□□□□□ -0.37
SMG1-203ENST00000532700 SHANK2-AS3Q9BTD1 123 aa12.76□□□□□ -0.37
SMG1-203ENST00000532700 PLA2G2EQ9NZK7 142 aa12.76□□□□□ -0.37
SMG1-203ENST00000532700 HSPB11Q9Y547 144 aa12.76□□□□□ -0.37
SMG1-203ENST00000532700 A8MTW9 85 aa12.75□□□□□ -0.37
SMG1-203ENST00000532700 COX7A2P2O60397 106 aa12.75□□□□□ -0.37
SMG1-203ENST00000532700 PRM2P04554 102 aa12.75□□□□□ -0.37
SMG1-203ENST00000532700 ID1P41134 155 aa12.75□□□□□ -0.37
SMG1-203ENST00000532700 SAMD13Q5VXD3 122 aa12.75□□□□□ -0.37
SMG1-203ENST00000532700 C16orf92Q96LL3 132 aa12.75□□□□□ -0.37
SMG1-203ENST00000532700 ARV1Q9H2C2 271 aa12.75□□□□□ -0.37
SMG1-203ENST00000532700 DNAH10Q8IVF4 4471 aa12.75□□□□□ -0.37
SMG1-203ENST00000532700 OPCMLQ14982 345 aa12.74□□□□□ -0.37
SMG1-203ENST00000532700 MORN5Q5VZ52 161 aa12.74□□□□□ -0.37
SMG1-203ENST00000532700 MIC13Q5XKP0 118 aa12.74□□□□□ -0.37
SMG1-203ENST00000532700 OR1L4Q8NGR5 311 aa12.74□□□□□ -0.37
SMG1-203ENST00000532700 CLUHP3Q96NS8 147 aa12.74□□□□□ -0.37
SMG1-203ENST00000532700 ATP5SQ99766 215 aa12.74□□□□□ -0.37
SMG1-203ENST00000532700 C1QTNF4Q9BXJ3 329 aa12.74□□□□□ -0.37
SMG1-203ENST00000532700 NPCDR1Q9BY65 106 aa12.74□□□□□ -0.37
SMG1-203ENST00000532700 DNAJC4Q9NNZ3 241 aa12.74□□□□□ -0.37
SMG1-203ENST00000532700 DNAH6Q9C0G6 4158 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 IGHV4-4A0A075B6R2 117 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 MRPS12O15235 138 aaKnown RBP12.73□□□□□ -0.37
SMG1-203ENST00000532700 IFNA5P01569 189 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 SNRPCP09234 159 aaKnown RBP12.73□□□□□ -0.37
SMG1-203ENST00000532700 RPL7P18124 248 aaKnown RBP12.73□□□□□ -0.37
SMG1-203ENST00000532700 MEOX2P50222 304 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 EMP1P54849 157 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 B2MP61769 119 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 NUTF2P61970 127 aaKnown RBP12.73□□□□□ -0.37
SMG1-203ENST00000532700 PSG9Q00887 426 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 C10orf113Q5VZT2 155 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 LINC00305Q7Z4B0 112 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 PFDN5Q99471 154 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 KCNIP2Q9NS61 270 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 SLC39A9Q9NUM3 307 aa12.73□□□□□ -0.37
SMG1-203ENST00000532700 TRAV10A0A0B4J240 114 aa12.72□□□□□ -0.37
SMG1-203ENST00000532700 C17orf112F2Z3M2 114 aa12.72□□□□□ -0.37
SMG1-203ENST00000532700 SCGB1C1Q8TD33 95 aa12.72□□□□□ -0.37
SMG1-203ENST00000532700 NEU1Q99519 415 aa12.72□□□□□ -0.37
SMG1-203ENST00000532700 WDR61Q9GZS3 305 aaKnown RBP12.72□□□□□ -0.37
SMG1-203ENST00000532700 RPRMQ9NS64 109 aa12.72□□□□□ -0.37
SMG1-203ENST00000532700 PXMP4Q9Y6I8 212 aa12.72□□□□□ -0.37
SMG1-203ENST00000532700 C11orf94C9JXX5 98 aa12.71□□□□□ -0.37
SMG1-203ENST00000532700 M0R2Z0 102 aa12.71□□□□□ -0.37
SMG1-203ENST00000532700 CRXO43186 299 aaPredicted RBP12.71□□□□□ -0.37
SMG1-203ENST00000532700 CNN1P51911 297 aaKnown RBP12.71□□□□□ -0.37
SMG1-203ENST00000532700 OR2T35Q8NGX2 323 aa12.71□□□□□ -0.37
SMG1-203ENST00000532700 TMEM37Q8WXS4 190 aa12.71□□□□□ -0.37
SMG1-203ENST00000532700 SMIM3Q9BZL3 60 aa12.71□□□□□ -0.37
SMG1-203ENST00000532700 SPINK13Q1W4C9 94 aa12.7□□□□□ -0.38
SMG1-203ENST00000532700 EBLN2Q6P2I7 272 aa12.7□□□□□ -0.38
SMG1-203ENST00000532700 INO80EQ8NBZ0 244 aaPredicted RBP12.7□□□□□ -0.38
SMG1-203ENST00000532700 AQP10Q96PS8 301 aa12.7□□□□□ -0.38
SMG1-203ENST00000532700 DEFB131BA0A096LNP1 70 aa12.69□□□□□ -0.38
SMG1-203ENST00000532700 H3BTX0 84 aa12.69□□□□□ -0.38
SMG1-203ENST00000532700 Q5BKY6 102 aa12.69□□□□□ -0.38
SMG1-203ENST00000532700 BPIFA4PQ86YQ2 179 aa12.69□□□□□ -0.38
SMG1-203ENST00000532700 BAP18Q8IXM2 172 aa12.69□□□□□ -0.38
SMG1-203ENST00000532700 PARD6GQ9BYG4 376 aaPredicted RBP12.69□□□□□ -0.38
SMG1-203ENST00000532700 SLC17A3O00476 420 aa12.68□□□□□ -0.38
SMG1-203ENST00000532700 FAM222AQ5U5X8 452 aa12.68□□□□□ -0.38
SMG1-203ENST00000532700 SPATA31B1PQ5VZV4 182 aa12.68□□□□□ -0.38
SMG1-203ENST00000532700 DKK2Q9UBU2 259 aa12.68□□□□□ -0.38
SMG1-203ENST00000532700 TRAV12-2A0A075B6T6 113 aa12.67□□□□□ -0.38
SMG1-203ENST00000532700 FXYD6-FXYD2A0A087WZ82 144 aa12.67□□□□□ -0.38
SMG1-203ENST00000532700 A0A087X0K7 114 aa12.67□□□□□ -0.38
SMG1-203ENST00000532700 AMBPP02760 352 aa12.67□□□□□ -0.38
SMG1-203ENST00000532700 ZNF266Q14584 549 aa12.67□□□□□ -0.38
SMG1-203ENST00000532700 ZNF738Q8NE65 137 aa12.67□□□□□ -0.38
SMG1-203ENST00000532700 YTHDF2Q9Y5A9 579 aaKnown RBP12.67□□□□□ -0.38
SMG1-203ENST00000532700 RFNGQ9Y644 331 aa12.67□□□□□ -0.38
SMG1-203ENST00000532700 LOC102723971A0A1B0GUV8 181 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms