RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 OR10P1Q8NGE3 313 aa9.21□□□□□ -0.94
CPSF1-204ENST00000529288 ATG101Q9BSB4 218 aa9.21□□□□□ -0.94
CPSF1-204ENST00000529288 NPVFQ9HCQ7 196 aa9.21□□□□□ -0.94
CPSF1-204ENST00000529288 NUDT15Q9NV35 164 aa9.21□□□□□ -0.94
CPSF1-204ENST00000529288 FAT2Q9NYQ8 4349 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 TRAV6A0A075B6T7 132 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 PMS2P5A8MQ11 134 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 A8MTW9 85 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 F5H768 121 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 BOLA2-SMG1P6H3BVE0 249 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 CRXO43186 299 aaPredicted RBP9.2□□□□□ -0.94
CPSF1-204ENST00000529288 AZU1P20160 251 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 SELENOTP62341 195 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 DLK1P80370 383 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 ZNF846Q147U1 533 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 PSG3Q16557 428 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 OR8A1Q8NGG7 326 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 ARV1Q9H2C2 271 aa9.2□□□□□ -0.94
CPSF1-204ENST00000529288 A0A1B0GVY2 172 aa9.19□□□□□ -0.94
CPSF1-204ENST00000529288 LYRM9A8MSI8 78 aa9.19□□□□□ -0.94
CPSF1-204ENST00000529288 GOSR2O14653 212 aa9.19□□□□□ -0.94
CPSF1-204ENST00000529288 NUDT3O95989 172 aa9.19□□□□□ -0.94
CPSF1-204ENST00000529288 CXCL3P19876 107 aa9.19□□□□□ -0.94
CPSF1-204ENST00000529288 B2MP61769 119 aa9.19□□□□□ -0.94
CPSF1-204ENST00000529288 SOHLH1Q5JUK2 328 aa9.19□□□□□ -0.94
CPSF1-204ENST00000529288 TEPPQ6URK8 271 aa9.19□□□□□ -0.94
CPSF1-204ENST00000529288 TMEM14EPQ6UXP3 125 aa9.19□□□□□ -0.94
CPSF1-204ENST00000529288 PATE2Q6UY27 113 aa9.19□□□□□ -0.94
CPSF1-204ENST00000529288 ZBTB8BQ8NAP8 495 aaPredicted RBP9.19□□□□□ -0.94
CPSF1-204ENST00000529288 SEC22CQ9BRL7 303 aa9.19□□□□□ -0.94
CPSF1-204ENST00000529288 FAM25EA8MYX2 175 aa9.18□□□□□ -0.94
CPSF1-204ENST00000529288 H3BTX0 84 aa9.18□□□□□ -0.94
CPSF1-204ENST00000529288 L7N2F9 121 aa9.18□□□□□ -0.94
CPSF1-204ENST00000529288 CCSO14618 274 aa9.18□□□□□ -0.94
CPSF1-204ENST00000529288 BCAP31P51572 246 aa9.18□□□□□ -0.94
CPSF1-204ENST00000529288 PLP1P60201 277 aa9.18□□□□□ -0.94
CPSF1-204ENST00000529288 VAMP2P63027 116 aa9.18□□□□□ -0.94
CPSF1-204ENST00000529288 RNF212Q495C1 297 aa9.18□□□□□ -0.94
CPSF1-204ENST00000529288 C15orf53Q8NAA6 179 aa9.18□□□□□ -0.94
CPSF1-204ENST00000529288 RPUSD4Q96CM3 377 aaKnown RBP9.18□□□□□ -0.94
CPSF1-204ENST00000529288 RCL1Q9Y2P8 373 aaKnown RBP9.18□□□□□ -0.94
CPSF1-204ENST00000529288 KIAA1109Q2LD37 5005 aa9.18□□□□□ -0.94
CPSF1-204ENST00000529288 A0A087X0K7 114 aa9.17□□□□□ -0.94
CPSF1-204ENST00000529288 FAM240BA0A1B0GVZ2 78 aa9.17□□□□□ -0.94
CPSF1-204ENST00000529288 AGPAT2O15120 278 aa9.17□□□□□ -0.94
CPSF1-204ENST00000529288 COX7A2P2O60397 106 aa9.17□□□□□ -0.94
CPSF1-204ENST00000529288 H2AFB2P0C5Z0 115 aa9.17□□□□□ -0.94
CPSF1-204ENST00000529288 ARL16Q0P5N6 197 aa9.17□□□□□ -0.94
CPSF1-204ENST00000529288 C1orf134Q5TEV5 83 aa9.17□□□□□ -0.94
CPSF1-204ENST00000529288 LINC00305Q7Z4B0 112 aa9.17□□□□□ -0.94
CPSF1-204ENST00000529288 ZNF546Q86UE3 836 aa9.17□□□□□ -0.94
CPSF1-204ENST00000529288 ZNF431Q8TF32 576 aaPredicted RBP9.17□□□□□ -0.94
CPSF1-204ENST00000529288 LSM5Q9Y4Y9 91 aaKnown RBP9.17□□□□□ -0.94
CPSF1-204ENST00000529288 J3KRW8 73 aa9.16□□□□□ -0.94
CPSF1-204ENST00000529288 TSC22D2O75157 780 aa9.16□□□□□ -0.94
CPSF1-204ENST00000529288 MBPP02686 304 aaPredicted RBP9.16□□□□□ -0.94
CPSF1-204ENST00000529288 ATP5G1P05496 136 aa9.16□□□□□ -0.94
CPSF1-204ENST00000529288 ATP5G3P48201 142 aa9.16□□□□□ -0.94
CPSF1-204ENST00000529288 TAS2R30P59541 319 aa9.16□□□□□ -0.94
CPSF1-204ENST00000529288 TAS2R60P59551 318 aa9.16□□□□□ -0.94
CPSF1-204ENST00000529288 MZT2BQ6NZ67 158 aa9.16□□□□□ -0.94
CPSF1-204ENST00000529288 Q6ZR54 194 aa9.16□□□□□ -0.94
CPSF1-204ENST00000529288 PARD6GQ9BYG4 376 aaPredicted RBP9.16□□□□□ -0.94
CPSF1-204ENST00000529288 RNF24Q9Y225 148 aa9.16□□□□□ -0.94
CPSF1-204ENST00000529288 C7orf66A4D0T2 115 aa9.15□□□□□ -0.94
CPSF1-204ENST00000529288 FNDC10F2Z333 226 aa9.15□□□□□ -0.94
CPSF1-204ENST00000529288 TSPOP30536 169 aa9.15□□□□□ -0.94
CPSF1-204ENST00000529288 CDKN1BP46527 198 aa9.15□□□□□ -0.94
CPSF1-204ENST00000529288 NRARPQ7Z6K4 114 aa9.15□□□□□ -0.94
CPSF1-204ENST00000529288 BPIFA4PQ86YQ2 179 aa9.15□□□□□ -0.94
CPSF1-204ENST00000529288 TMEM256Q8N2U0 113 aa9.15□□□□□ -0.94
CPSF1-204ENST00000529288 OR10J6PQ8NGY7 276 aa9.15□□□□□ -0.94
CPSF1-204ENST00000529288 MGST2Q99735 147 aa9.15□□□□□ -0.94
CPSF1-204ENST00000529288 C11orf1Q9H5F2 150 aa9.15□□□□□ -0.94
CPSF1-204ENST00000529288 NOP10Q9NPE3 64 aaKnown RBP9.15□□□□□ -0.94
CPSF1-204ENST00000529288 DYNC1H1Q14204 4646 aaKnown RBP9.15□□□□□ -0.94
CPSF1-204ENST00000529288 RYR1P21817 5038 aa9.15□□□□□ -0.95
CPSF1-204ENST00000529288 PLAC8L1A1L4L8 177 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 C5orf51A6NDU8 294 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 CBY3A6NI87 242 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 PRAC2D3DTV9 90 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 MRPS12O15235 138 aaKnown RBP9.14□□□□□ -0.95
CPSF1-204ENST00000529288 CST7O76096 145 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 MED14OSP0DP75 135 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 CAV2P51636 162 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 IL15RAQ13261 267 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 OR5I1Q13606 314 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 CLINT1Q14677 625 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 KIR3DS1Q14943 382 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 PXDC1Q5TGL8 231 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 C10orf113Q5VZT2 155 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 LCN15Q6UWW0 184 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 CCDC28AQ8IWP9 274 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 C12orf45Q8N5I9 185 aaPredicted RBP9.14□□□□□ -0.95
CPSF1-204ENST00000529288 C16orf74Q96GX8 76 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 SLC50A1Q9BRV3 221 aa9.14□□□□□ -0.95
CPSF1-204ENST00000529288 ZNF331Q9NQX6 463 aaPredicted RBP9.14□□□□□ -0.95
CPSF1-204ENST00000529288 TIMM8BQ9Y5J9 83 aaPredicted RBP9.14□□□□□ -0.95
CPSF1-204ENST00000529288 TRAV5A0A0B4J249 113 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 FAM24AA6NFZ4 105 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms