RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 CNN1P51911 297 aaKnown RBP10.33□□□□□ -0.76
CAPN1-216ENST00000528739 CLINT1Q14677 625 aa10.33□□□□□ -0.76
CAPN1-216ENST00000528739 PSG3Q16557 428 aa10.33□□□□□ -0.76
CAPN1-216ENST00000528739 ZNF767PQ75MW2 155 aa10.33□□□□□ -0.76
CAPN1-216ENST00000528739 ZNF709Q8N972 641 aa10.33□□□□□ -0.76
CAPN1-216ENST00000528739 PFDN5Q99471 154 aa10.33□□□□□ -0.76
CAPN1-216ENST00000528739 SLC39A9Q9NUM3 307 aa10.33□□□□□ -0.76
CAPN1-216ENST00000528739 OR5AC2Q9NZP5 309 aa10.33□□□□□ -0.76
CAPN1-216ENST00000528739 TENM2Q9NT68 2774 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 A0A087X0K7 114 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 TRAV5A0A0B4J249 113 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 C11orf94C9JXX5 98 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 HBE1P02100 147 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 CXCL3P19876 107 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 RPL29P47914 159 aaKnown RBP10.32□□□□□ -0.76
CAPN1-216ENST00000528739 OPCMLQ14982 345 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 SPINK13Q1W4C9 94 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 LCN15Q6UWW0 184 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 OR5C1Q8NGR4 320 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 THAP6Q8TBB0 222 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 LINC00476Q8WZB0 136 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 CLUHP3Q96NS8 147 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 RFNGQ9Y644 331 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 PXMP4Q9Y6I8 212 aa10.32□□□□□ -0.76
CAPN1-216ENST00000528739 SMIM9A6NGZ8 99 aa10.31□□□□□ -0.76
CAPN1-216ENST00000528739 M0R2Z0 102 aa10.31□□□□□ -0.76
CAPN1-216ENST00000528739 VWC2Q2TAL6 325 aa10.31□□□□□ -0.76
CAPN1-216ENST00000528739 MORN5Q5VZ52 161 aa10.31□□□□□ -0.76
CAPN1-216ENST00000528739 ZNF705AQ6ZN79 300 aaPredicted RBP10.31□□□□□ -0.76
CAPN1-216ENST00000528739 Q6ZTC4 211 aa10.31□□□□□ -0.76
CAPN1-216ENST00000528739 PPP1R1CQ8WVI7 109 aa10.31□□□□□ -0.76
CAPN1-216ENST00000528739 RPUSD4Q96CM3 377 aaKnown RBP10.31□□□□□ -0.76
CAPN1-216ENST00000528739 SLC50A1Q9BRV3 221 aa10.31□□□□□ -0.76
CAPN1-216ENST00000528739 HRH4Q9H3N8 390 aa10.31□□□□□ -0.76
CAPN1-216ENST00000528739 CELA1Q9UNI1 258 aa10.31□□□□□ -0.76
CAPN1-216ENST00000528739 CSMD3Q7Z407 3707 aa10.31□□□□□ -0.76
CAPN1-216ENST00000528739 TRAV10A0A0B4J240 114 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 TMEM189A5PLL7 270 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 MPDU1O75352 247 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 AMBPP02760 352 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 SPART-AS1P0CW21 52 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 PET100P0DJ07 73 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 CXCL2P19875 107 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 H2BFSP57053 126 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 PRR20EP86478 221 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 PRR20CP86479 221 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 PRR20DP86480 221 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 PRR20BP86481 221 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 PRR20AP86496 221 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 RRN3P1Q2M238 152 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 OR11H7Q8NGC8 314 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 OR8A1Q8NGG7 326 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 IGF2BP2-AS1Q96M15 143 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 NEU1Q99519 415 aa10.3□□□□□ -0.76
CAPN1-216ENST00000528739 DYNC2H1Q8NCM8 4307 aaKnown RBP10.29□□□□□ -0.76
CAPN1-216ENST00000528739 TRAV12-2A0A075B6T6 113 aa10.29□□□□□ -0.76
CAPN1-216ENST00000528739 LOC102723971A0A1B0GUV8 181 aa10.29□□□□□ -0.76
CAPN1-216ENST00000528739 ZNF705FA8MVS1 300 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-216ENST00000528739 H0YIZ8 118 aa10.29□□□□□ -0.76
CAPN1-216ENST00000528739 MRPS12O15235 138 aaKnown RBP10.29□□□□□ -0.76
CAPN1-216ENST00000528739 INSP01308 110 aa10.29□□□□□ -0.76
CAPN1-216ENST00000528739 C1orf158Q8N1D5 194 aa10.29□□□□□ -0.76
CAPN1-216ENST00000528739 OR10J6PQ8NGY7 276 aa10.29□□□□□ -0.76
CAPN1-216ENST00000528739 NPCDR1Q9BY65 106 aa10.29□□□□□ -0.76
CAPN1-216ENST00000528739 ZNF331Q9NQX6 463 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-216ENST00000528739 RYR2Q92736 4967 aa10.29□□□□□ -0.76
CAPN1-216ENST00000528739 SACSQ9NZJ4 4579 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 C17orf112F2Z3M2 114 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 BOLA2-SMG1P6H3BVE0 249 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 MPC2O95563 127 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 HTN1P15515 57 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 C12orf74Q32Q52 190 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 BAP18Q8IXM2 172 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 SCGB1C1Q8TD33 95 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 LINC01587Q99440 93 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 SMIM3Q9BZL3 60 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 TIMM9Q9Y5J7 89 aa10.28□□□□□ -0.76
CAPN1-216ENST00000528739 DEFB131BA0A096LNP1 70 aa10.27□□□□□ -0.77
CAPN1-216ENST00000528739 ZNF705GA8MUZ8 300 aaPredicted RBP10.27□□□□□ -0.77
CAPN1-216ENST00000528739 H3BQ15 152 aa10.27□□□□□ -0.77
CAPN1-216ENST00000528739 SLC17A3O00476 420 aa10.27□□□□□ -0.77
CAPN1-216ENST00000528739 IFNA5P01569 189 aa10.27□□□□□ -0.77
CAPN1-216ENST00000528739 GUK1Q16774 197 aa10.27□□□□□ -0.77
CAPN1-216ENST00000528739 BLNKQ8WV28 456 aa10.27□□□□□ -0.77
CAPN1-216ENST00000528739 KCNIP2Q9NS61 270 aa10.27□□□□□ -0.77
CAPN1-216ENST00000528739 ALG5Q9Y673 324 aa10.27□□□□□ -0.77
CAPN1-216ENST00000528739 J3KRW8 73 aa10.26□□□□□ -0.77
CAPN1-216ENST00000528739 IGLC2P0DOY2 106 aa10.26□□□□□ -0.77
CAPN1-216ENST00000528739 HTN3P15516 51 aa10.26□□□□□ -0.77
CAPN1-216ENST00000528739 RPL12P30050 165 aaKnown RBP10.26□□□□□ -0.77
CAPN1-216ENST00000528739 GCSAMLQ5JQS6 135 aa10.26□□□□□ -0.77
CAPN1-216ENST00000528739 FAM222AQ5U5X8 452 aa10.26□□□□□ -0.77
CAPN1-216ENST00000528739 CHAC2Q8WUX2 184 aa10.26□□□□□ -0.77
CAPN1-216ENST00000528739 ATP5SQ99766 215 aa10.26□□□□□ -0.77
CAPN1-216ENST00000528739 RNF126Q9BV68 326 aa10.26□□□□□ -0.77
CAPN1-216ENST00000528739 WDR61Q9GZS3 305 aaKnown RBP10.26□□□□□ -0.77
CAPN1-216ENST00000528739 ZNF586Q9NXT0 402 aa10.26□□□□□ -0.77
CAPN1-216ENST00000528739 MBD2Q9UBB5 411 aa10.26□□□□□ -0.77
CAPN1-216ENST00000528739 YTHDF2Q9Y5A9 579 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms