RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ASCL5Q7RTU5 278 aa14.45□□□□□ -0.1
LTBP3-210ENST00000528516 PLSCR4Q9NRQ2 329 aa14.45□□□□□ -0.1
LTBP3-210ENST00000528516 CENPEQ02224 2701 aa14.45□□□□□ -0.1
LTBP3-210ENST00000528516 DOPEY1Q5JWR5 2465 aa14.45□□□□□ -0.1
LTBP3-210ENST00000528516 C1orf162Q8NEQ5 155 aaPredicted RBP14.44□□□□□ -0.1
LTBP3-210ENST00000528516 RPP21Q9H633 154 aaKnown RBP14.44□□□□□ -0.1
LTBP3-210ENST00000528516 ZNF257Q9Y2Q1 563 aa14.44□□□□□ -0.1
LTBP3-210ENST00000528516 WIPF2Q8TF74 440 aaPredicted RBP14.44□□□□□ -0.1
LTBP3-210ENST00000528516 IGF2BP2-AS1Q96M15 143 aa14.44□□□□□ -0.1
LTBP3-210ENST00000528516 JMJD8Q96S16 334 aa14.44□□□□□ -0.1
LTBP3-210ENST00000528516 Q9H3A6 140 aa14.44□□□□□ -0.1
LTBP3-210ENST00000528516 LINC00312Q9Y6C7 94 aa14.44□□□□□ -0.1
LTBP3-210ENST00000528516 NBEAQ8NFP9 2946 aa14.44□□□□□ -0.1
LTBP3-210ENST00000528516 K7EM74 188 aa14.44□□□□□ -0.1
LTBP3-210ENST00000528516 M0R3E3 92 aa14.44□□□□□ -0.1
LTBP3-210ENST00000528516 PRSS57Q6UWY2 283 aa14.44□□□□□ -0.1
LTBP3-210ENST00000528516 CIARTQ8N365 385 aaPredicted RBP14.44□□□□□ -0.1
LTBP3-210ENST00000528516 PF4V1P10720 104 aa14.43□□□□□ -0.1
LTBP3-210ENST00000528516 TEX48A0A1B0GUV7 120 aa14.43□□□□□ -0.1
LTBP3-210ENST00000528516 H3BRM9 83 aa14.43□□□□□ -0.1
LTBP3-210ENST00000528516 C16orf54Q6UWD8 224 aa14.43□□□□□ -0.1
LTBP3-210ENST00000528516 RNASE6Q93091 150 aaKnown RBP14.43□□□□□ -0.1
LTBP3-210ENST00000528516 ZNF503Q96F45 646 aa14.43□□□□□ -0.1
LTBP3-210ENST00000528516 PRCDQ00LT1 54 aa14.43□□□□□ -0.1
LTBP3-210ENST00000528516 C2orf83Q53S99 150 aa14.43□□□□□ -0.1
LTBP3-210ENST00000528516 Q8TCH9 128 aa14.43□□□□□ -0.1
LTBP3-210ENST00000528516 WFDC12Q8WWY7 111 aa14.43□□□□□ -0.1
LTBP3-210ENST00000528516 HCFC1P51610 2035 aa14.43□□□□□ -0.1
LTBP3-210ENST00000528516 MGAQ8IWI9 3026 aa14.42□□□□□ -0.1
LTBP3-210ENST00000528516 MORN5Q5VZ52 161 aa14.42□□□□□ -0.1
LTBP3-210ENST00000528516 ATP5L2Q7Z4Y8 100 aa14.42□□□□□ -0.1
LTBP3-210ENST00000528516 OR5A1Q8NGJ0 315 aa14.42□□□□□ -0.1
LTBP3-210ENST00000528516 FAM57AQ8TBR7 257 aa14.42□□□□□ -0.1
LTBP3-210ENST00000528516 TIMM23O14925 209 aa14.42□□□□□ -0.1
LTBP3-210ENST00000528516 SMIM17P0DL12 118 aa14.42□□□□□ -0.1
LTBP3-210ENST00000528516 TMPRSS3P57727 454 aa14.42□□□□□ -0.1
LTBP3-210ENST00000528516 PPP1R27Q86WC6 154 aa14.42□□□□□ -0.1
LTBP3-210ENST00000528516 NDUFS8O00217 210 aa14.42□□□□□ -0.1
LTBP3-210ENST00000528516 TSSC4Q9Y5U2 329 aaPredicted RBP14.42□□□□□ -0.1
LTBP3-210ENST00000528516 IGHV3-11P01762 117 aa14.41□□□□□ -0.1
LTBP3-210ENST00000528516 CNTFRP26992 372 aa14.41□□□□□ -0.1
LTBP3-210ENST00000528516 HSD52Q0P140 79 aa14.41□□□□□ -0.1
LTBP3-210ENST00000528516 SAMD5Q5TGI4 173 aa14.41□□□□□ -0.1
LTBP3-210ENST00000528516 C1orf159Q96HA4 380 aa14.41□□□□□ -0.1
LTBP3-210ENST00000528516 URB1-AS1Q96HZ7 61 aa14.41□□□□□ -0.1
LTBP3-210ENST00000528516 EXPH5Q8NEV8 1989 aa14.41□□□□□ -0.1
LTBP3-210ENST00000528516 ERVK11-1P61568 191 aa14.41□□□□□ -0.1
LTBP3-210ENST00000528516 NPFFR1Q9GZQ6 430 aa14.4□□□□□ -0.1
LTBP3-210ENST00000528516 APOBEC3AP31941 199 aaPredicted RBP14.4□□□□□ -0.1
LTBP3-210ENST00000528516 TPSG1Q9NRR2 321 aa14.4□□□□□ -0.1
LTBP3-210ENST00000528516 SRRM4A7MD48 611 aaKnown RBP14.4□□□□□ -0.1
LTBP3-210ENST00000528516 SMIM13P0DJ93 91 aa14.4□□□□□ -0.1
LTBP3-210ENST00000528516 CACNG7P62955 275 aa14.4□□□□□ -0.1
LTBP3-210ENST00000528516 FOXE3Q13461 319 aa14.4□□□□□ -0.1
LTBP3-210ENST00000528516 GLMPQ8WWB7 406 aa14.4□□□□□ -0.1
LTBP3-210ENST00000528516 GPR82Q96P67 336 aa14.4□□□□□ -0.1
LTBP3-210ENST00000528516 PRSS46E5RG02 174 aa14.39□□□□□ -0.11
LTBP3-210ENST00000528516 LOXL3P58215 753 aa14.39□□□□□ -0.11
LTBP3-210ENST00000528516 RBPMS2Q6ZRY4 209 aaKnown RBP14.39□□□□□ -0.11
LTBP3-210ENST00000528516 RPL7P18124 248 aaKnown RBP14.39□□□□□ -0.11
LTBP3-210ENST00000528516 MFAP4P55083 255 aa14.39□□□□□ -0.11
LTBP3-210ENST00000528516 UTF1Q5T230 341 aa14.39□□□□□ -0.11
LTBP3-210ENST00000528516 A0A0G2JNJ9 132 aa14.39□□□□□ -0.11
LTBP3-210ENST00000528516 CKS1BP61024 79 aa14.39□□□□□ -0.11
LTBP3-210ENST00000528516 LY6DQ14210 128 aa14.39□□□□□ -0.11
LTBP3-210ENST00000528516 C19orf24Q9BVV8 132 aa14.39□□□□□ -0.11
LTBP3-210ENST00000528516 COL25A1Q9BXS0 654 aaPredicted RBP14.39□□□□□ -0.11
LTBP3-210ENST00000528516 Q9UFV3 132 aa14.39□□□□□ -0.11
LTBP3-210ENST00000528516 A0A1W2PPM0 123 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 PSG3Q16557 428 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 SFTA2Q6UW10 78 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 C1RLQ9NZP8 487 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 DPM3Q9P2X0 92 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 EPDR1Q9UM22 224 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 IGKV1OR2-108A0A075B7D4 117 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 NPIPB5A8MRT5 1133 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 EIF4EBP1Q13541 118 aaPredicted RBP14.38□□□□□ -0.11
LTBP3-210ENST00000528516 FAM120AOSQ5T036 256 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 C16orf92Q96LL3 132 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 MRPL32Q9BYC8 188 aaKnown RBP14.38□□□□□ -0.11
LTBP3-210ENST00000528516 RAB9AP51151 201 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 SCGB1D4Q6XE38 83 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 ADAMTSL5Q6ZMM2 481 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 FAM231DQ6ZW35 169 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 ZNF329Q86UD4 541 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 GAFA1Q96PS6 74 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 TMEM133Q9H2Q1 129 aa14.38□□□□□ -0.11
LTBP3-210ENST00000528516 ADIPOQQ15848 244 aa14.37□□□□□ -0.11
LTBP3-210ENST00000528516 ZNF502Q8TBZ5 544 aa14.37□□□□□ -0.11
LTBP3-210ENST00000528516 FN1P02751 2386 aaKnown RBP14.37□□□□□ -0.11
LTBP3-210ENST00000528516 FAM90A9PA6NNJ1 464 aa14.37□□□□□ -0.11
LTBP3-210ENST00000528516 PROP1O75360 226 aa14.37□□□□□ -0.11
LTBP3-210ENST00000528516 C2orf91Q6ZV80 131 aa14.37□□□□□ -0.11
LTBP3-210ENST00000528516 MTURNQ8N3F0 131 aa14.37□□□□□ -0.11
LTBP3-210ENST00000528516 Q8TAT8 98 aa14.37□□□□□ -0.11
LTBP3-210ENST00000528516 ATP6V0BQ99437 205 aa14.37□□□□□ -0.11
LTBP3-210ENST00000528516 COL5A1P20908 1838 aaPredicted RBP14.37□□□□□ -0.11
LTBP3-210ENST00000528516 NCR2O95944 276 aa14.37□□□□□ -0.11
LTBP3-210ENST00000528516 WDFY3Q8IZQ1 3526 aa14.37□□□□□ -0.11
LTBP3-210ENST00000528516 VWC2LB2RUY7 222 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms