RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CXCL3P19876 107 aa15.79■□□□□ 0.12
TRAPPC4-208ENST00000527680 BAK1Q16611 211 aa15.79■□□□□ 0.12
TRAPPC4-208ENST00000527680 TEPPQ6URK8 271 aa15.79■□□□□ 0.12
TRAPPC4-208ENST00000527680 ARV1Q9H2C2 271 aa15.79■□□□□ 0.12
TRAPPC4-208ENST00000527680 DNAH2Q9P225 4427 aa15.79■□□□□ 0.12
TRAPPC4-208ENST00000527680 NACAE9PAV3 2078 aa15.79■□□□□ 0.12
TRAPPC4-208ENST00000527680 NUDT3O95989 172 aa15.78■□□□□ 0.12
TRAPPC4-208ENST00000527680 TSPOP30536 169 aa15.78■□□□□ 0.12
TRAPPC4-208ENST00000527680 SLC38A11Q08AI6 406 aa15.78■□□□□ 0.12
TRAPPC4-208ENST00000527680 IAH1Q2TAA2 248 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC4-208ENST00000527680 TMEM14EPQ6UXP3 125 aa15.78■□□□□ 0.12
TRAPPC4-208ENST00000527680 TMEM256Q8N2U0 113 aa15.78■□□□□ 0.12
TRAPPC4-208ENST00000527680 DNAH17Q9UFH2 4485 aa15.77■□□□□ 0.12
TRAPPC4-208ENST00000527680 A0A087X0K7 114 aa15.77■□□□□ 0.12
TRAPPC4-208ENST00000527680 PATE2Q6UY27 113 aa15.77■□□□□ 0.12
TRAPPC4-208ENST00000527680 RPUSD4Q96CM3 377 aaKnown RBP15.77■□□□□ 0.12
TRAPPC4-208ENST00000527680 FNDC10F2Z333 226 aa15.76■□□□□ 0.11
TRAPPC4-208ENST00000527680 ATP5G1P05496 136 aa15.76■□□□□ 0.11
TRAPPC4-208ENST00000527680 SNRPCP09234 159 aaKnown RBP15.76■□□□□ 0.11
TRAPPC4-208ENST00000527680 ATP5G3P48201 142 aa15.76■□□□□ 0.11
TRAPPC4-208ENST00000527680 FAM3BP58499 235 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC4-208ENST00000527680 TAS2R60P59551 318 aa15.76■□□□□ 0.11
TRAPPC4-208ENST00000527680 MUC4Q99102 2169 aa15.76■□□□□ 0.11
TRAPPC4-208ENST00000527680 CBY3A6NI87 242 aa15.75■□□□□ 0.11
TRAPPC4-208ENST00000527680 LINC00305Q7Z4B0 112 aa15.75■□□□□ 0.11
TRAPPC4-208ENST00000527680 TSC22D2O75157 780 aa15.74■□□□□ 0.11
TRAPPC4-208ENST00000527680 CDKN1BP46527 198 aa15.74■□□□□ 0.11
TRAPPC4-208ENST00000527680 TAS2R30P59541 319 aa15.74■□□□□ 0.11
TRAPPC4-208ENST00000527680 PXDC1Q5TGL8 231 aa15.74■□□□□ 0.11
TRAPPC4-208ENST00000527680 ZNF546Q86UE3 836 aa15.74■□□□□ 0.11
TRAPPC4-208ENST00000527680 ZBTB8BQ8NAP8 495 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC4-208ENST00000527680 C16orf74Q96GX8 76 aa15.74■□□□□ 0.11
TRAPPC4-208ENST00000527680 TIMM8BQ9Y5J9 83 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC4-208ENST00000527680 PLAC8L1A1L4L8 177 aa15.73■□□□□ 0.11
TRAPPC4-208ENST00000527680 K7EPK0 472 aa15.73■□□□□ 0.11
TRAPPC4-208ENST00000527680 AGPAT2O15120 278 aa15.73■□□□□ 0.11
TRAPPC4-208ENST00000527680 CCL18P55774 89 aa15.73■□□□□ 0.11
TRAPPC4-208ENST00000527680 LCN15Q6UWW0 184 aa15.73■□□□□ 0.11
TRAPPC4-208ENST00000527680 PKHD1P08F94 4074 aa15.73■□□□□ 0.11
TRAPPC4-208ENST00000527680 L7N2F9 121 aa15.72■□□□□ 0.11
TRAPPC4-208ENST00000527680 COX7A2P2O60397 106 aa15.72■□□□□ 0.11
TRAPPC4-208ENST00000527680 VAMP2P63027 116 aa15.72■□□□□ 0.11
TRAPPC4-208ENST00000527680 BPIFA4PQ86YQ2 179 aa15.72■□□□□ 0.11
TRAPPC4-208ENST00000527680 SLC50A1Q9BRV3 221 aa15.72■□□□□ 0.11
TRAPPC4-208ENST00000527680 NOP10Q9NPE3 64 aaKnown RBP15.72■□□□□ 0.11
TRAPPC4-208ENST00000527680 CXCL2P19875 107 aa15.71■□□□□ 0.11
TRAPPC4-208ENST00000527680 ARL16Q0P5N6 197 aa15.71■□□□□ 0.11
TRAPPC4-208ENST00000527680 CLINT1Q14677 625 aa15.71■□□□□ 0.11
TRAPPC4-208ENST00000527680 ZNF846Q147U1 533 aa15.71■□□□□ 0.11
TRAPPC4-208ENST00000527680 ZNF493Q6ZR52 646 aa15.71■□□□□ 0.11
TRAPPC4-208ENST00000527680 OR10J6PQ8NGY7 276 aa15.71■□□□□ 0.11
TRAPPC4-208ENST00000527680 GGACTQ9BVM4 153 aa15.71■□□□□ 0.11
TRAPPC4-208ENST00000527680 ZNF331Q9NQX6 463 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC4-208ENST00000527680 C7orf66A4D0T2 115 aa15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 H3BTX0 84 aa15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 H7BYZ3 331 aa15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 MRPS12O15235 138 aaKnown RBP15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 MBPP02686 304 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 BCAP31P51572 246 aa15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 C10orf113Q5VZT2 155 aa15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 ZNF575Q86XF7 245 aa15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 CCDC28AQ8IWP9 274 aa15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 MITD1Q8WV92 249 aa15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 RBM38Q9H0Z9 239 aaKnown RBP15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 RCL1Q9Y2P8 373 aaKnown RBP15.7■□□□□ 0.1
TRAPPC4-208ENST00000527680 FAM25EA8MYX2 175 aa15.69■□□□□ 0.1
TRAPPC4-208ENST00000527680 ZNF701M0R085 212 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC4-208ENST00000527680 OR5I1Q13606 314 aa15.69■□□□□ 0.1
TRAPPC4-208ENST00000527680 RAB31Q13636 194 aa15.69■□□□□ 0.1
TRAPPC4-208ENST00000527680 CNPY1Q3B7I2 92 aa15.69■□□□□ 0.1
TRAPPC4-208ENST00000527680 Q6ZRG5 221 aa15.69■□□□□ 0.1
TRAPPC4-208ENST00000527680 NBDYA0A0U1RRE5 68 aa15.68■□□□□ 0.1
TRAPPC4-208ENST00000527680 BTCP35070 178 aa15.68■□□□□ 0.1
TRAPPC4-208ENST00000527680 ZNRF2Q8NHG8 242 aa15.68■□□□□ 0.1
TRAPPC4-208ENST00000527680 TMEM263Q8WUH6 116 aaKnown RBP15.68■□□□□ 0.1
TRAPPC4-208ENST00000527680 TMEM37Q8WXS4 190 aa15.68■□□□□ 0.1
TRAPPC4-208ENST00000527680 SDHCQ99643 169 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC4-208ENST00000527680 MGST2Q99735 147 aa15.68■□□□□ 0.1
TRAPPC4-208ENST00000527680 PARD6GQ9BYG4 376 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC4-208ENST00000527680 DNAJC4Q9NNZ3 241 aa15.68■□□□□ 0.1
TRAPPC4-208ENST00000527680 LSM5Q9Y4Y9 91 aaKnown RBP15.68■□□□□ 0.1
TRAPPC4-208ENST00000527680 PKD1P98161 4303 aa15.67■□□□□ 0.1
TRAPPC4-208ENST00000527680 CCSO14618 274 aa15.67■□□□□ 0.1
TRAPPC4-208ENST00000527680 CAMLGP49069 296 aa15.67■□□□□ 0.1
TRAPPC4-208ENST00000527680 KIR3DS1Q14943 382 aa15.67■□□□□ 0.1
TRAPPC4-208ENST00000527680 RNF141Q8WVD5 230 aa15.67■□□□□ 0.1
TRAPPC4-208ENST00000527680 C20orf144Q9BQM9 153 aa15.67■□□□□ 0.1
TRAPPC4-208ENST00000527680 PXMP4Q9Y6I8 212 aa15.67■□□□□ 0.1
TRAPPC4-208ENST00000527680 PCLOQ9Y6V0 5065 aa15.67■□□□□ 0.1
TRAPPC4-208ENST00000527680 PRAC2D3DTV9 90 aa15.66■□□□□ 0.1
TRAPPC4-208ENST00000527680 J3KRW8 73 aa15.66■□□□□ 0.1
TRAPPC4-208ENST00000527680 IL7P13232 177 aa15.66■□□□□ 0.1
TRAPPC4-208ENST00000527680 CAV2P51636 162 aa15.66■□□□□ 0.1
TRAPPC4-208ENST00000527680 OPCMLQ14982 345 aa15.66■□□□□ 0.1
TRAPPC4-208ENST00000527680 C6orf223Q8N319 242 aa15.66■□□□□ 0.1
TRAPPC4-208ENST00000527680 RNASE8Q8TDE3 154 aaKnown RBP15.66■□□□□ 0.1
TRAPPC4-208ENST00000527680 LINC00588Q9Y4M8 146 aa15.66■□□□□ 0.1
TRAPPC4-208ENST00000527680 C5orf51A6NDU8 294 aa15.65■□□□□ 0.1
TRAPPC4-208ENST00000527680 SLC17A3O00476 420 aa15.65■□□□□ 0.1
TRAPPC4-208ENST00000527680 CST7O76096 145 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms