RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 FAM78BQ5VT40 261 aa11.82□□□□□ -0.52
SSSCA1-202ENST00000526433 ZFAND6Q6FIF0 208 aa11.82□□□□□ -0.52
SSSCA1-202ENST00000526433 CLUHP3Q96NS8 147 aa11.82□□□□□ -0.52
SSSCA1-202ENST00000526433 CLEC5AQ9NY25 188 aa11.82□□□□□ -0.52
SSSCA1-202ENST00000526433 XCL2Q9UBD3 114 aa11.82□□□□□ -0.52
SSSCA1-202ENST00000526433 H3BQ15 152 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 H3BTX0 84 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 IGLC2P0DOY2 106 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 FXYD7P58549 80 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 PSG3Q16557 428 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 CASC10Q5T4H9 136 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 LCN15Q6UWW0 184 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 CSNK1G2-AS1Q8NCQ2 148 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 IL17DQ8TAD2 202 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 C1QTNF4Q9BXJ3 329 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 HRH4Q9H3N8 390 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 KCNIP2Q9NS61 270 aa11.81□□□□□ -0.52
SSSCA1-202ENST00000526433 CXCL2P19875 107 aa11.8□□□□□ -0.52
SSSCA1-202ENST00000526433 PSG9Q00887 426 aa11.8□□□□□ -0.52
SSSCA1-202ENST00000526433 ZNF738Q8NE65 137 aa11.8□□□□□ -0.52
SSSCA1-202ENST00000526433 SLC50A1Q9BRV3 221 aa11.8□□□□□ -0.52
SSSCA1-202ENST00000526433 ZNF331Q9NQX6 463 aaPredicted RBP11.8□□□□□ -0.52
SSSCA1-202ENST00000526433 DUSP14O95147 198 aaKnown RBP11.79□□□□□ -0.52
SSSCA1-202ENST00000526433 ZNF705DP0CH99 300 aaPredicted RBP11.79□□□□□ -0.52
SSSCA1-202ENST00000526433 ZNF705BP0CI00 300 aaPredicted RBP11.79□□□□□ -0.52
SSSCA1-202ENST00000526433 MIR17HGQ75NE6 70 aa11.79□□□□□ -0.52
SSSCA1-202ENST00000526433 OR2T35Q8NGX2 323 aa11.79□□□□□ -0.52
SSSCA1-202ENST00000526433 SAT2Q96F10 170 aaPredicted RBP11.79□□□□□ -0.52
SSSCA1-202ENST00000526433 AQP10Q96PS8 301 aa11.79□□□□□ -0.52
SSSCA1-202ENST00000526433 PARD6GQ9BYG4 376 aaPredicted RBP11.79□□□□□ -0.52
SSSCA1-202ENST00000526433 SLC35B3Q9H1N7 401 aa11.79□□□□□ -0.52
SSSCA1-202ENST00000526433 ZNF586Q9NXT0 402 aa11.79□□□□□ -0.52
SSSCA1-202ENST00000526433 TMEM14CQ9P0S9 112 aa11.79□□□□□ -0.52
SSSCA1-202ENST00000526433 A8MTW9 85 aa11.78□□□□□ -0.52
SSSCA1-202ENST00000526433 SLC17A3O00476 420 aa11.78□□□□□ -0.52
SSSCA1-202ENST00000526433 CNN1P51911 297 aaKnown RBP11.78□□□□□ -0.52
SSSCA1-202ENST00000526433 GUK1Q16774 197 aa11.78□□□□□ -0.52
SSSCA1-202ENST00000526433 FFAR4Q5NUL3 377 aa11.78□□□□□ -0.52
SSSCA1-202ENST00000526433 RFNGQ9Y644 331 aa11.78□□□□□ -0.52
SSSCA1-202ENST00000526433 ZNF705FA8MVS1 300 aaPredicted RBP11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 ZNF705EA8MWA4 302 aaPredicted RBP11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 PYYP10082 97 aa11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 PRB4P10163 310 aaPredicted RBP11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 HIST1H1EP10412 219 aaKnown RBP11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 INO80EQ8NBZ0 244 aaPredicted RBP11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 OR8A1Q8NGG7 326 aa11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 RPUSD4Q96CM3 377 aaKnown RBP11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 FAM167A-AS1Q96KT0 104 aa11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 SLC25A2Q9BXI2 301 aa11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 MFFQ9GZY8 342 aa11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 X6R8D5 127 aa11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 CSMD3Q7Z407 3707 aa11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 TENM2Q9NT68 2774 aa11.77□□□□□ -0.53
SSSCA1-202ENST00000526433 FXYD6-FXYD2A0A087WZ82 144 aa11.76□□□□□ -0.53
SSSCA1-202ENST00000526433 DEFB4AO15263 64 aa11.76□□□□□ -0.53
SSSCA1-202ENST00000526433 MRPL32Q9BYC8 188 aaKnown RBP11.76□□□□□ -0.53
SSSCA1-202ENST00000526433 FUT9Q9Y231 359 aa11.76□□□□□ -0.53
SSSCA1-202ENST00000526433 TRBV19A0A075B6N1 114 aa11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 ZNF253O75346 499 aa11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 RBMY1A1P0DJD3 496 aaKnown RBP11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 RBMY1CP0DJD4 496 aa11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 MIFP14174 115 aa11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 HIST1H1AQ02539 215 aaPredicted RBP11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 ZNF266Q14584 549 aa11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 RBMY1FQ15415 496 aaKnown RBP11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 Q8NAQ8 132 aa11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 BLNKQ8WV28 456 aa11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 OR51M1Q9H341 326 aa11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 C11orf68Q9H3H3 251 aaKnown RBP11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 TNFSF18Q9UNG2 199 aa11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 TIMM9Q9Y5J7 89 aa11.75□□□□□ -0.53
SSSCA1-202ENST00000526433 STARD9Q9P2P6 4700 aa11.74□□□□□ -0.53
SSSCA1-202ENST00000526433 IGHV4-28A0A0C4DH34 117 aa11.74□□□□□ -0.53
SSSCA1-202ENST00000526433 RNF222A6NCQ9 220 aa11.74□□□□□ -0.53
SSSCA1-202ENST00000526433 PRAC2D3DTV9 90 aa11.74□□□□□ -0.53
SSSCA1-202ENST00000526433 G3V3Q6 166 aa11.74□□□□□ -0.53
SSSCA1-202ENST00000526433 NDUFB4O95168 129 aa11.74□□□□□ -0.53
SSSCA1-202ENST00000526433 RHOBP62745 196 aa11.74□□□□□ -0.53
SSSCA1-202ENST00000526433 NBEAP1P0C6P0 100 aa11.73□□□□□ -0.53
SSSCA1-202ENST00000526433 ACOT6Q3I5F7 207 aaPredicted RBP11.73□□□□□ -0.53
SSSCA1-202ENST00000526433 ZNF705AQ6ZN79 300 aaPredicted RBP11.73□□□□□ -0.53
SSSCA1-202ENST00000526433 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
SSSCA1-202ENST00000526433 RNF141Q8WVD5 230 aa11.73□□□□□ -0.53
SSSCA1-202ENST00000526433 PAXXQ9BUH6 204 aa11.73□□□□□ -0.53
SSSCA1-202ENST00000526433 PPP1R14DQ9NXH3 145 aa11.73□□□□□ -0.53
SSSCA1-202ENST00000526433 DYNC2H1Q8NCM8 4307 aaKnown RBP11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 IGHV3OR16-12A0A075B7B8 117 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 SMLR1H3BR10 107 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 M0R2Z0 102 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 AMBPP02760 352 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 M6PRP20645 277 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 PMS2P11Q13670 270 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 PDE6HQ13956 83 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 SPINK13Q1W4C9 94 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 C1orf158Q8N1D5 194 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 OR10J6PQ8NGY7 276 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 C11orf45Q8TAV5 145 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 FXYD5Q96DB9 178 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 IGF2BP2-AS1Q96M15 143 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 209.7 ms