RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 PRR20DP86480 221 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 PRR20BP86481 221 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 PRR20AP86496 221 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 OXA1LQ15070 435 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 C10orf113Q5VZT2 155 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 BPIFA4PQ86YQ2 179 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 OR1L4Q8NGR5 311 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 LRRC20Q8TCA0 184 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 SLC35B3Q9H1N7 401 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 TRAV10A0A0B4J240 114 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 TEX48A0A1B0GUV7 120 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 IGSF23A1L1A6 192 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 MPDU1O75352 247 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 CXCL3P19876 107 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 RPL29P47914 159 aaKnown RBP13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 FXYD7P58549 80 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 LCN15Q6UWW0 184 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 AMTNQ6UX39 209 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 ZNF738Q8NE65 137 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 TMEM37Q8WXS4 190 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 PFDN5Q99471 154 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 SLC50A1Q9BRV3 221 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 DNAJC4Q9NNZ3 241 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 RFNGQ9Y644 331 aa13.28□□□□□ -0.28
TSPAN4-216ENST00000526055 E5RGE8 158 aa13.27□□□□□ -0.29
TSPAN4-216ENST00000526055 CNN1P51911 297 aaKnown RBP13.27□□□□□ -0.29
TSPAN4-216ENST00000526055 PSG3Q16557 428 aa13.27□□□□□ -0.29
TSPAN4-216ENST00000526055 LGALS9CQ6DKI2 356 aa13.27□□□□□ -0.29
TSPAN4-216ENST00000526055 RNF182Q8N6D2 247 aa13.27□□□□□ -0.29
TSPAN4-216ENST00000526055 IGF2BP2-AS1Q96M15 143 aa13.27□□□□□ -0.29
TSPAN4-216ENST00000526055 SLC25A31Q9H0C2 315 aa13.27□□□□□ -0.29
TSPAN4-216ENST00000526055 UBE2L5PA0A1B0GUS4 154 aa13.26□□□□□ -0.29
TSPAN4-216ENST00000526055 SIX6O95475 246 aa13.26□□□□□ -0.29
TSPAN4-216ENST00000526055 B2MP61769 119 aa13.26□□□□□ -0.29
TSPAN4-216ENST00000526055 BAXQ07812 192 aa13.26□□□□□ -0.29
TSPAN4-216ENST00000526055 OPCMLQ14982 345 aa13.26□□□□□ -0.29
TSPAN4-216ENST00000526055 OR11H7Q8NGC8 314 aa13.26□□□□□ -0.29
TSPAN4-216ENST00000526055 MED28Q9H204 178 aa13.26□□□□□ -0.29
TSPAN4-216ENST00000526055 HBE1P02100 147 aa13.25□□□□□ -0.29
TSPAN4-216ENST00000526055 MIC13Q5XKP0 118 aa13.25□□□□□ -0.29
TSPAN4-216ENST00000526055 IGFL4Q6B9Z1 124 aa13.25□□□□□ -0.29
TSPAN4-216ENST00000526055 Q6ZTC4 211 aa13.25□□□□□ -0.29
TSPAN4-216ENST00000526055 C1orf158Q8N1D5 194 aa13.25□□□□□ -0.29
TSPAN4-216ENST00000526055 OR8A1Q8NGG7 326 aa13.25□□□□□ -0.29
TSPAN4-216ENST00000526055 ZNF331Q9NQX6 463 aaPredicted RBP13.25□□□□□ -0.29
TSPAN4-216ENST00000526055 SLC39A9Q9NUM3 307 aa13.25□□□□□ -0.29
TSPAN4-216ENST00000526055 HYDINQ4G0P3 5121 aa13.24□□□□□ -0.29
TSPAN4-216ENST00000526055 IGHV3OR16-12A0A075B7B8 117 aa13.24□□□□□ -0.29
TSPAN4-216ENST00000526055 SPART-AS1P0CW21 52 aa13.24□□□□□ -0.29
TSPAN4-216ENST00000526055 PET100P0DJ07 73 aa13.24□□□□□ -0.29
TSPAN4-216ENST00000526055 H2BFSP57053 126 aa13.24□□□□□ -0.29
TSPAN4-216ENST00000526055 GUK1Q16774 197 aa13.24□□□□□ -0.29
TSPAN4-216ENST00000526055 CELA1Q9UNI1 258 aa13.24□□□□□ -0.29
TSPAN4-216ENST00000526055 PXMP4Q9Y6I8 212 aa13.24□□□□□ -0.29
TSPAN4-216ENST00000526055 INSP01308 110 aa13.23□□□□□ -0.29
TSPAN4-216ENST00000526055 IGLC2P0DOY2 106 aa13.23□□□□□ -0.29
TSPAN4-216ENST00000526055 FGF7P21781 194 aa13.23□□□□□ -0.29
TSPAN4-216ENST00000526055 C12orf74Q32Q52 190 aa13.23□□□□□ -0.29
TSPAN4-216ENST00000526055 RPUSD4Q96CM3 377 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-216ENST00000526055 RNF126Q9BV68 326 aa13.23□□□□□ -0.29
TSPAN4-216ENST00000526055 IGLL5B9A064 214 aa13.22□□□□□ -0.29
TSPAN4-216ENST00000526055 BOLA2-SMG1P6H3BVE0 249 aa13.22□□□□□ -0.29
TSPAN4-216ENST00000526055 HIST1H1AQ02539 215 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-216ENST00000526055 RRN3P1Q2M238 152 aa13.22□□□□□ -0.29
TSPAN4-216ENST00000526055 MORN5Q5VZ52 161 aa13.22□□□□□ -0.29
TSPAN4-216ENST00000526055 PPP1R1CQ8WVI7 109 aa13.22□□□□□ -0.29
TSPAN4-216ENST00000526055 ASB13Q8WXK3 278 aa13.22□□□□□ -0.29
TSPAN4-216ENST00000526055 TMEM208Q9BTX3 173 aa13.22□□□□□ -0.29
TSPAN4-216ENST00000526055 CRXO43186 299 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 ZNF253O75346 499 aa13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 NHLH2Q02577 135 aa13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 SPINK13Q1W4C9 94 aa13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 LRRC37A5PQ49AS3 106 aa13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 OR5C1Q8NGR4 320 aa13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 SAT2Q96F10 170 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 NPCDR1Q9BY65 106 aa13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 KCNIP2Q9NS61 270 aa13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 PPP1R14DQ9NXH3 145 aa13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 OR5AC2Q9NZP5 309 aa13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 DKK2Q9UBU2 259 aa13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 APLNQ9ULZ1 77 aa13.21□□□□□ -0.29
TSPAN4-216ENST00000526055 EPPK1P58107 5090 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-216ENST00000526055 DEFB131BA0A096LNP1 70 aa13.2□□□□□ -0.3
TSPAN4-216ENST00000526055 LOC102723971A0A1B0GUV8 181 aa13.2□□□□□ -0.3
TSPAN4-216ENST00000526055 H0YIZ8 118 aa13.2□□□□□ -0.3
TSPAN4-216ENST00000526055 M0R2Z0 102 aa13.2□□□□□ -0.3
TSPAN4-216ENST00000526055 RHOBP62745 196 aa13.2□□□□□ -0.3
TSPAN4-216ENST00000526055 TMEM256Q8N2U0 113 aa13.2□□□□□ -0.3
TSPAN4-216ENST00000526055 TMEM14CQ9P0S9 112 aa13.2□□□□□ -0.3
TSPAN4-216ENST00000526055 H3BQ15 152 aa13.19□□□□□ -0.3
TSPAN4-216ENST00000526055 MPC2O95563 127 aa13.19□□□□□ -0.3
TSPAN4-216ENST00000526055 TSPOP30536 169 aa13.19□□□□□ -0.3
TSPAN4-216ENST00000526055 EMP1P54849 157 aa13.19□□□□□ -0.3
TSPAN4-216ENST00000526055 FCN2Q15485 313 aa13.19□□□□□ -0.3
TSPAN4-216ENST00000526055 IGHV4-4A0A075B6R2 117 aa13.18□□□□□ -0.3
TSPAN4-216ENST00000526055 CDKN1BP46527 198 aa13.18□□□□□ -0.3
TSPAN4-216ENST00000526055 PDE6HQ13956 83 aa13.18□□□□□ -0.3
TSPAN4-216ENST00000526055 FAM222AQ5U5X8 452 aa13.18□□□□□ -0.3
TSPAN4-216ENST00000526055 OR10J6PQ8NGY7 276 aa13.18□□□□□ -0.3
TSPAN4-216ENST00000526055 MRPL53Q96EL3 112 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms