RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 Q8NAQ8 132 aa9.26□□□□□ -0.93
CLP1-202ENST00000525602 CHAC2Q8WUX2 184 aa9.26□□□□□ -0.93
CLP1-202ENST00000525602 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
CLP1-202ENST00000525602 C1QTNF4Q9BXJ3 329 aa9.26□□□□□ -0.93
CLP1-202ENST00000525602 SLC39A9Q9NUM3 307 aa9.26□□□□□ -0.93
CLP1-202ENST00000525602 XCL2Q9UBD3 114 aa9.26□□□□□ -0.93
CLP1-202ENST00000525602 PXMP4Q9Y6I8 212 aa9.26□□□□□ -0.93
CLP1-202ENST00000525602 DNAH6Q9C0G6 4158 aa9.26□□□□□ -0.93
CLP1-202ENST00000525602 CXorf65A6NEN9 183 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 DEFB4AO15263 64 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 MPDU1O75352 247 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 FXYD7P58549 80 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 CLINT1Q14677 625 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 FAM78BQ5VT40 261 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 ZNF709Q8N972 641 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 OR4B1Q8NGF8 309 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 OR1L4Q8NGR5 311 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 THAP6Q8TBB0 222 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 RNF126Q9BV68 326 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 NPCDR1Q9BY65 106 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 DNAJC4Q9NNZ3 241 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 X6R8D5 127 aa9.25□□□□□ -0.93
CLP1-202ENST00000525602 IGHV4-28A0A0C4DH34 117 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 A8MTW9 85 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 MIFP14174 115 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 CXCL2P19875 107 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 HLA-DMBP28068 263 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 BPIFA4PQ86YQ2 179 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 LINC00476Q8WZB0 136 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 PFDN5Q99471 154 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 MBD2Q9UBB5 411 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 CXCL3P19876 107 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 PSG9Q00887 426 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 LCN15Q6UWW0 184 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 ZNF738Q8NE65 137 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 LRRC20Q8TCA0 184 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 SLC35B3Q9H1N7 401 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 HSPB11Q9Y547 144 aa9.24□□□□□ -0.93
CLP1-202ENST00000525602 KIAA1109Q2LD37 5005 aa9.23□□□□□ -0.93
CLP1-202ENST00000525602 TRAV5A0A0B4J249 113 aa9.23□□□□□ -0.93
CLP1-202ENST00000525602 NUPR2A6NF83 97 aa9.23□□□□□ -0.93
CLP1-202ENST00000525602 SNRPCP09234 159 aaKnown RBP9.23□□□□□ -0.93
CLP1-202ENST00000525602 RBMY1A1P0DJD3 496 aaKnown RBP9.23□□□□□ -0.93
CLP1-202ENST00000525602 RBMY1CP0DJD4 496 aa9.23□□□□□ -0.93
CLP1-202ENST00000525602 IGLC2P0DOY2 106 aa9.23□□□□□ -0.93
CLP1-202ENST00000525602 CNN1P51911 297 aaKnown RBP9.23□□□□□ -0.93
CLP1-202ENST00000525602 RBMY1FQ15415 496 aaKnown RBP9.23□□□□□ -0.93
CLP1-202ENST00000525602 AMTNQ6UX39 209 aa9.23□□□□□ -0.93
CLP1-202ENST00000525602 C11orf45Q8TAV5 145 aa9.23□□□□□ -0.93
CLP1-202ENST00000525602 ATP5SQ99766 215 aa9.23□□□□□ -0.93
CLP1-202ENST00000525602 SLC50A1Q9BRV3 221 aa9.23□□□□□ -0.93
CLP1-202ENST00000525602 WDR61Q9GZS3 305 aaKnown RBP9.23□□□□□ -0.93
CLP1-202ENST00000525602 MFFQ9GZY8 342 aa9.23□□□□□ -0.93
CLP1-202ENST00000525602 ZNF331Q9NQX6 463 aaPredicted RBP9.23□□□□□ -0.93
CLP1-202ENST00000525602 H3BTX0 84 aa9.22□□□□□ -0.93
CLP1-202ENST00000525602 SLC17A3O00476 420 aa9.22□□□□□ -0.93
CLP1-202ENST00000525602 DUSP14O95147 198 aaKnown RBP9.22□□□□□ -0.93
CLP1-202ENST00000525602 ZNF705DP0CH99 300 aaPredicted RBP9.22□□□□□ -0.93
CLP1-202ENST00000525602 ZNF705BP0CI00 300 aaPredicted RBP9.22□□□□□ -0.93
CLP1-202ENST00000525602 RPL12P30050 165 aaKnown RBP9.22□□□□□ -0.93
CLP1-202ENST00000525602 NANOS2P60321 138 aaKnown RBP9.22□□□□□ -0.93
CLP1-202ENST00000525602 FCN2Q15485 313 aa9.22□□□□□ -0.93
CLP1-202ENST00000525602 PSG3Q16557 428 aa9.22□□□□□ -0.93
CLP1-202ENST00000525602 GCSAMLQ5JQS6 135 aa9.22□□□□□ -0.93
CLP1-202ENST00000525602 ZNF705AQ6ZN79 300 aaPredicted RBP9.22□□□□□ -0.93
CLP1-202ENST00000525602 OR11H7Q8NGC8 314 aa9.22□□□□□ -0.93
CLP1-202ENST00000525602 MED28Q9H204 178 aa9.22□□□□□ -0.93
CLP1-202ENST00000525602 ZNF705FA8MVS1 300 aaPredicted RBP9.21□□□□□ -0.94
CLP1-202ENST00000525602 H3BQ15 152 aa9.21□□□□□ -0.94
CLP1-202ENST00000525602 LY6G6CO95867 125 aa9.21□□□□□ -0.94
CLP1-202ENST00000525602 CEMP1Q6PRD7 247 aaPredicted RBP9.21□□□□□ -0.94
CLP1-202ENST00000525602 OR8A1Q8NGG7 326 aa9.21□□□□□ -0.94
CLP1-202ENST00000525602 PHLDA1Q8WV24 401 aaPredicted RBP9.21□□□□□ -0.94
CLP1-202ENST00000525602 HRH4Q9H3N8 390 aa9.21□□□□□ -0.94
CLP1-202ENST00000525602 KCNIP2Q9NS61 270 aa9.21□□□□□ -0.94
CLP1-202ENST00000525602 PKHD1P08F94 4074 aa9.21□□□□□ -0.94
CLP1-202ENST00000525602 PRB4P10163 310 aaPredicted RBP9.2□□□□□ -0.94
CLP1-202ENST00000525602 HIST1H1AQ02539 215 aaPredicted RBP9.2□□□□□ -0.94
CLP1-202ENST00000525602 GUK1Q16774 197 aa9.2□□□□□ -0.94
CLP1-202ENST00000525602 RGS21Q2M5E4 152 aa9.2□□□□□ -0.94
CLP1-202ENST00000525602 RPUSD4Q96CM3 377 aaKnown RBP9.2□□□□□ -0.94
CLP1-202ENST00000525602 SAT2Q96F10 170 aaPredicted RBP9.2□□□□□ -0.94
CLP1-202ENST00000525602 NEU1Q99519 415 aa9.2□□□□□ -0.94
CLP1-202ENST00000525602 SMIM3Q9BZL3 60 aa9.2□□□□□ -0.94
CLP1-202ENST00000525602 IGHV3OR16-12A0A075B7B8 117 aa9.19□□□□□ -0.94
CLP1-202ENST00000525602 C17orf112F2Z3M2 114 aa9.19□□□□□ -0.94
CLP1-202ENST00000525602 SPINK13Q1W4C9 94 aa9.19□□□□□ -0.94
CLP1-202ENST00000525602 C1orf158Q8N1D5 194 aa9.19□□□□□ -0.94
CLP1-202ENST00000525602 RPP25LQ8N5L8 163 aaKnown RBP9.19□□□□□ -0.94
CLP1-202ENST00000525602 IGF2BP2-AS1Q96M15 143 aa9.19□□□□□ -0.94
CLP1-202ENST00000525602 SLC25A2Q9BXI2 301 aa9.19□□□□□ -0.94
CLP1-202ENST00000525602 ZNF586Q9NXT0 402 aa9.19□□□□□ -0.94
CLP1-202ENST00000525602 TMEM14CQ9P0S9 112 aa9.19□□□□□ -0.94
CLP1-202ENST00000525602 KLK5Q9Y337 293 aaPredicted RBP9.19□□□□□ -0.94
CLP1-202ENST00000525602 GOLT1BQ9Y3E0 138 aa9.19□□□□□ -0.94
CLP1-202ENST00000525602 BOLA2-SMG1P6H3BVE0 249 aa9.18□□□□□ -0.94
CLP1-202ENST00000525602 M0R2Z0 102 aa9.18□□□□□ -0.94
CLP1-202ENST00000525602 IFNA5P01569 189 aa9.18□□□□□ -0.94
CLP1-202ENST00000525602 AMBPP02760 352 aa9.18□□□□□ -0.94
CLP1-202ENST00000525602 PYYP10082 97 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms