RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 PPYP01298 95 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 IFNA1P01562 189 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 IGKV1-39P01597 117 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 TRGC2P03986 189 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 IGKV1D-39P04432 117 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 PFN1P07737 140 aaKnown RBP3.37□□□□□ -1.87
SKP1-213ENST00000524288 CST2P09228 141 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 CD200P41217 278 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 DYNLT3P51808 116 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 SERF2P84101 59 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 MPV17LQ2QL34 196 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 AKR1C8PQ5T2L2 129 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 FAM27BQ5VT28 67 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 OR2T2Q6IF00 324 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 CLEC19AQ6UXS0 136 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 FAM19A1Q7Z5A9 133 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 DPPA2Q7Z7J5 298 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 PRNTQ86SH4 94 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 LINC00596Q86U02 117 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 OR2M7Q8NG81 312 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 OR5L1Q8NGL2 311 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 OR1P1Q8NH06 330 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 LMX1AQ8TE12 382 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 C22orf15Q8WYQ4 148 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 SPTSSAQ969W0 71 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 PACRGQ96M98 296 aaPredicted RBP3.37□□□□□ -1.87
SKP1-213ENST00000524288 SND1-IT1Q9HBX3 110 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 CHD7Q9P2D1 2997 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 IGKV1-6A0A0C4DH72 117 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 IGKV1-12A0A0C4DH73 117 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 A0A1B0GV90 55 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 FAM24AA6NFZ4 105 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 TMEM210A6NLX4 147 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 ZNF727A8MUV8 499 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 LGALS9O00182 355 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 CYB5BO43169 146 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 SSSCA1O60232 199 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 IGKV1D-12P01611 117 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 CTXN2P0C2S0 81 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 GZMBP10144 247 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 CD99P14209 185 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 OPRM1P35372 400 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 KRTAP10-1P60331 282 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 ESPL1Q14674 2120 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 TMEM249Q2WGJ8 235 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 ACOT6Q3I5F7 207 aaPredicted RBP3.36□□□□□ -1.87
SKP1-213ENST00000524288 SP6Q3SY56 376 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 UNQ9165/PRO28630Q6UXU0 137 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 BHLHA15Q7RTS1 189 aaPredicted RBP3.36□□□□□ -1.87
SKP1-213ENST00000524288 C20orf196Q8IYI0 205 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 ORMDL3Q8N138 153 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 SLC25A45Q8N413 288 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 ZFP62Q8NB50 900 aaPredicted RBP3.36□□□□□ -1.87
SKP1-213ENST00000524288 OR5D18Q8NGL1 313 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 OR5C1Q8NGR4 320 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 OR11L1Q8NGX0 322 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 OR4X1Q8NH49 305 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 LSM10Q969L4 123 aaKnown RBP3.36□□□□□ -1.87
SKP1-213ENST00000524288 BTF3L4Q96K17 158 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 FAAP24Q9BTP7 215 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 DDA1Q9BW61 102 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 MRPL20Q9BYC9 149 aaKnown RBP3.36□□□□□ -1.87
SKP1-213ENST00000524288 TAAR3PQ9P1P4 343 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 NAT8Q9UHE5 227 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 UNC13CQ8NB66 2214 aa3.36□□□□□ -1.87
SKP1-213ENST00000524288 SPAG17Q6Q759 2223 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 ASXL3Q9C0F0 2248 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 TRAV9-1A0A075B6T8 112 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 KIR2DS1A0A191URI9 304 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 DEGS1O15121 323 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 NRASP01111 189 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 HRASP01112 189 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 IFNA5P01569 189 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 FABP4P15090 132 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 SRP14P37108 136 aaKnown RBP3.35□□□□□ -1.87
SKP1-213ENST00000524288 FXYD4P59646 89 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 RUNX1Q01196 453 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 MSMO1Q15800 293 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 LRRC75BQ2VPJ9 315 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 PIGYQ3MUY2 71 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 ZNF818PQ6ZRF7 136 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 TMEM144Q7Z5S9 345 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 GAPTQ8N292 157 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 LINC00337Q8N6G1 96 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 ZIC4Q8N9L1 334 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 BORCS8Q96FH0 119 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 REEP6Q96HR9 211 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 IMMP2LQ96T52 175 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 MANBALQ9NQG1 85 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 TMEM38BQ9NVV0 291 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 PRO0628Q9UI54 55 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 CHCHD2Q9Y6H1 151 aaPredicted RBP3.35□□□□□ -1.87
SKP1-213ENST00000524288 S4R3C0 116 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 CACNA1EQ15878 2313 aa3.35□□□□□ -1.87
SKP1-213ENST00000524288 ASCC3Q8N3C0 2202 aaKnown RBP3.34□□□□□ -1.87
SKP1-213ENST00000524288 TRAV40A0A0B4J280 105 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 CTXND1A0A1B0GTU2 59 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 MAP1LC3B2A6NCE7 125 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 F5H5K5 113 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 M0QZK8 103 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms