RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 ARL16Q0P5N6 197 aa13.21□□□□□ -0.29
PTP4A3-206ENST00000524028 PSG3Q16557 428 aa13.21□□□□□ -0.29
PTP4A3-206ENST00000524028 FNDC10F2Z333 226 aa13.2□□□□□ -0.3
PTP4A3-206ENST00000524028 IAH1Q2TAA2 248 aaPredicted RBP13.2□□□□□ -0.3
PTP4A3-206ENST00000524028 C4orf46Q504U0 113 aa13.2□□□□□ -0.3
PTP4A3-206ENST00000524028 TRIQKQ629K1 86 aa13.2□□□□□ -0.3
PTP4A3-206ENST00000524028 C15orf53Q8NAA6 179 aa13.2□□□□□ -0.3
PTP4A3-206ENST00000524028 OR10P1Q8NGE3 313 aa13.2□□□□□ -0.3
PTP4A3-206ENST00000524028 LINC01587Q99440 93 aa13.2□□□□□ -0.3
PTP4A3-206ENST00000524028 ARV1Q9H2C2 271 aa13.2□□□□□ -0.3
PTP4A3-206ENST00000524028 RCL1Q9Y2P8 373 aaKnown RBP13.2□□□□□ -0.3
PTP4A3-206ENST00000524028 SNRPCP09234 159 aaKnown RBP13.19□□□□□ -0.3
PTP4A3-206ENST00000524028 C1orf134Q5TEV5 83 aa13.19□□□□□ -0.3
PTP4A3-206ENST00000524028 TEPPQ6URK8 271 aa13.19□□□□□ -0.3
PTP4A3-206ENST00000524028 ZBTB8BQ8NAP8 495 aaPredicted RBP13.19□□□□□ -0.3
PTP4A3-206ENST00000524028 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
PTP4A3-206ENST00000524028 GSKIPQ9P0R6 139 aa13.19□□□□□ -0.3
PTP4A3-206ENST00000524028 NACAE9PAV3 2078 aa13.19□□□□□ -0.3
PTP4A3-206ENST00000524028 F5H768 121 aa13.18□□□□□ -0.3
PTP4A3-206ENST00000524028 TSC22D2O75157 780 aa13.18□□□□□ -0.3
PTP4A3-206ENST00000524028 TAS2R30P59541 319 aa13.18□□□□□ -0.3
PTP4A3-206ENST00000524028 TAS2R60P59551 318 aa13.18□□□□□ -0.3
PTP4A3-206ENST00000524028 RPUSD4Q96CM3 377 aaKnown RBP13.18□□□□□ -0.3
PTP4A3-206ENST00000524028 PPP1R14DQ9NXH3 145 aa13.18□□□□□ -0.3
PTP4A3-206ENST00000524028 MGAT4CQ9UBM8 478 aa13.18□□□□□ -0.3
PTP4A3-206ENST00000524028 C7orf66A4D0T2 115 aa13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 ZNF701M0R085 212 aaPredicted RBP13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 AGPAT2O15120 278 aa13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 MBPP02686 304 aaPredicted RBP13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 HTN1P15515 57 aa13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 FAM3BP58499 235 aaPredicted RBP13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 KIR3DS1Q14943 382 aa13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 MORN5Q5VZ52 161 aa13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 LINC00305Q7Z4B0 112 aa13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 ZNF575Q86XF7 245 aa13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 TMEM256Q8N2U0 113 aa13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 MITD1Q8WV92 249 aa13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 ZNF331Q9NQX6 463 aaPredicted RBP13.17□□□□□ -0.3
PTP4A3-206ENST00000524028 CBY3A6NI87 242 aa13.16□□□□□ -0.3
PTP4A3-206ENST00000524028 GOSR2O14653 212 aa13.16□□□□□ -0.3
PTP4A3-206ENST00000524028 SOHLH1Q5JUK2 328 aa13.16□□□□□ -0.3
PTP4A3-206ENST00000524028 PXDC1Q5TGL8 231 aa13.16□□□□□ -0.3
PTP4A3-206ENST00000524028 S100A7AQ86SG5 101 aa13.16□□□□□ -0.3
PTP4A3-206ENST00000524028 ZNF546Q86UE3 836 aa13.16□□□□□ -0.3
PTP4A3-206ENST00000524028 TMEM37Q8WXS4 190 aa13.16□□□□□ -0.3
PTP4A3-206ENST00000524028 MGST2Q99735 147 aa13.16□□□□□ -0.3
PTP4A3-206ENST00000524028 ATG101Q9BSB4 218 aa13.16□□□□□ -0.3
PTP4A3-206ENST00000524028 RYR1P21817 5038 aa13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 PRAC2D3DTV9 90 aa13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 H3BTX0 84 aa13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 SLC17A3O00476 420 aa13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 NUDT3O95989 172 aa13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 ATP5G1P05496 136 aa13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 CXCL2P19875 107 aa13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 CDKN1BP46527 198 aa13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 ATP5G3P48201 142 aa13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 ZNRF2Q8NHG8 242 aa13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 C16orf74Q96GX8 76 aa13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 PARD6GQ9BYG4 376 aaPredicted RBP13.15□□□□□ -0.3
PTP4A3-206ENST00000524028 CENPXA8MT69 81 aa13.14□□□□□ -0.31
PTP4A3-206ENST00000524028 CCSO14618 274 aa13.14□□□□□ -0.31
PTP4A3-206ENST00000524028 IL7P13232 177 aa13.14□□□□□ -0.31
PTP4A3-206ENST00000524028 LCN15Q6UWW0 184 aa13.14□□□□□ -0.31
PTP4A3-206ENST00000524028 RNASE8Q8TDE3 154 aaKnown RBP13.14□□□□□ -0.31
PTP4A3-206ENST00000524028 GGACTQ9BVM4 153 aa13.14□□□□□ -0.31
PTP4A3-206ENST00000524028 NOP10Q9NPE3 64 aaKnown RBP13.14□□□□□ -0.31
PTP4A3-206ENST00000524028 TIMM8BQ9Y5J9 83 aaPredicted RBP13.14□□□□□ -0.31
PTP4A3-206ENST00000524028 TNP2Q05952 138 aa13.13□□□□□ -0.31
PTP4A3-206ENST00000524028 OPCMLQ14982 345 aa13.13□□□□□ -0.31
PTP4A3-206ENST00000524028 BPIFA4PQ86YQ2 179 aa13.13□□□□□ -0.31
PTP4A3-206ENST00000524028 RNF141Q8WVD5 230 aa13.13□□□□□ -0.31
PTP4A3-206ENST00000524028 SLC50A1Q9BRV3 221 aa13.13□□□□□ -0.31
PTP4A3-206ENST00000524028 RNF24Q9Y225 148 aa13.13□□□□□ -0.31
PTP4A3-206ENST00000524028 LINC00588Q9Y4M8 146 aa13.13□□□□□ -0.31
PTP4A3-206ENST00000524028 ABCA13Q86UQ4 5058 aa13.13□□□□□ -0.31
PTP4A3-206ENST00000524028 NBDYA0A0U1RRE5 68 aa13.12□□□□□ -0.31
PTP4A3-206ENST00000524028 H3BQ15 152 aa13.12□□□□□ -0.31
PTP4A3-206ENST00000524028 PLA2G10O15496 165 aa13.12□□□□□ -0.31
PTP4A3-206ENST00000524028 COX7A2P2O60397 106 aa13.12□□□□□ -0.31
PTP4A3-206ENST00000524028 IGLC2P0DOY2 106 aa13.12□□□□□ -0.31
PTP4A3-206ENST00000524028 SAT2Q96F10 170 aaPredicted RBP13.12□□□□□ -0.31
PTP4A3-206ENST00000524028 C20orf85Q9H1P6 137 aa13.12□□□□□ -0.31
PTP4A3-206ENST00000524028 TRAV5A0A0B4J249 113 aa13.11□□□□□ -0.31
PTP4A3-206ENST00000524028 H7BYZ3 331 aa13.11□□□□□ -0.31
PTP4A3-206ENST00000524028 GFI1BQ5VTD9 330 aa13.11□□□□□ -0.31
PTP4A3-206ENST00000524028 C10orf113Q5VZT2 155 aa13.11□□□□□ -0.31
PTP4A3-206ENST00000524028 ZNF493Q6ZR52 646 aa13.11□□□□□ -0.31
PTP4A3-206ENST00000524028 TMEM263Q8WUH6 116 aaKnown RBP13.11□□□□□ -0.31
PTP4A3-206ENST00000524028 C11orf1Q9H5F2 150 aa13.11□□□□□ -0.31
PTP4A3-206ENST00000524028 CNPY1Q3B7I2 92 aa13.1□□□□□ -0.31
PTP4A3-206ENST00000524028 LSM5Q9Y4Y9 91 aaKnown RBP13.1□□□□□ -0.31
PTP4A3-206ENST00000524028 L7N2F9 121 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 CST7O76096 145 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 CAMLGP49069 296 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 CCL18P55774 89 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 VAMP2P63027 116 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 MIC13Q5XKP0 118 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 NRARPQ7Z6K4 114 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 C6orf223Q8N319 242 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 LINC00612Q8N6U2 182 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms