RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 FMC1Q96HJ9 113 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 USMG5Q96IX5 58 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 MS4A10Q96PG2 267 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 PYGO2Q9BRQ0 406 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 GNB4Q9HAV0 340 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 AURKAIP1Q9NWT8 199 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-211ENST00000523062 ZNF586Q9NXT0 402 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 VPREB3Q9UKI3 123 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 EPDR1Q9UM22 224 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 CR1P17927 2039 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 TRAV9-1A0A075B6T8 112 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 A0A0G2JLM5 398 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 A0A1W2PPQ1 181 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 PPP5D1E7EU14 171 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 H3BTX0 84 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 K7EN84 100 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 MRPS12O15235 138 aaKnown RBP5.3□□□□□ -1.56
CSMD1-211ENST00000523062 TCRAP04437 139 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 SNRPCP09234 159 aaKnown RBP5.3□□□□□ -1.56
CSMD1-211ENST00000523062 BLCAPP62952 87 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 HIST2H2BCQ6DN03 193 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 TOMM20LQ6UXN7 152 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 Q6YL49 198 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 BAGE2Q86Y30 109 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 ZFP82Q8N141 532 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 GPR82Q96P67 336 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 SRD5A3Q9H8P0 318 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 BIN3Q9NQY0 253 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 OSTCQ9NRP0 149 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 LINC00527Q9UJ94 153 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 RPH3ALQ9UNE2 315 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 KLF12Q9Y4X4 402 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 FBN2P35556 2912 aa5.3□□□□□ -1.56
CSMD1-211ENST00000523062 A0A087X0K7 114 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 TRAV34A0A0B4J273 112 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 TRBV6-1A0A0K0K1D8 114 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 SERTM2A0A1B0GWG4 89 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 TMEM89A2RUT3 159 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 K7EQM0 130 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 ISLRO14498 428 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 ZNF253O75346 499 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 IGLV2-8P01709 118 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 TYMSP04818 313 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 S100A6P06703 90 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 MGST1P10620 155 aaKnown RBP5.29□□□□□ -1.56
CSMD1-211ENST00000523062 PF4V1P10720 104 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 ARL3P36405 182 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 FAM3BP58499 235 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-211ENST00000523062 ERVFC1-1P60608 527 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 PSG9Q00887 426 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 CFHR3Q02985 330 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 FAM209BQ5JX69 171 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 C1orf194Q5T5A4 169 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 SIGLEC15Q6ZMC9 328 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 FAM231DQ6ZW35 169 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 Q86TA4 180 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 OR8I2Q8N0Y5 310 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 WFDC11Q8NEX6 87 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 ZNF414Q96IQ9 312 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 NOL4LQ96MY1 436 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-211ENST00000523062 METTL26Q96S19 204 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 FOXC2Q99958 501 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 NPFFR1Q9GZQ6 430 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 PRDM13Q9H4Q3 707 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 AAMDCQ9H7C9 122 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 IL36BQ9NZH7 164 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 POLQO75417 2590 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 CSPG4Q6UVK1 2322 aa5.29□□□□□ -1.56
CSMD1-211ENST00000523062 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.28□□□□□ -1.56
CSMD1-211ENST00000523062 IGHV3-35A0A0C4DH35 117 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 SLC17A3O00476 420 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 NDUFA4O00483 81 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 LTAP01374 205 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 CSN1S1P47710 185 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 RPL15P61313 204 aaKnown RBP5.28□□□□□ -1.56
CSMD1-211ENST00000523062 RPL19P84098 196 aaKnown RBP5.28□□□□□ -1.56
CSMD1-211ENST00000523062 FOXL1Q12952 345 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 OR5I1Q13606 314 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 RPEL1Q2QD12 228 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 IBA57Q5T440 356 aaKnown RBP5.28□□□□□ -1.56
CSMD1-211ENST00000523062 GOLT1AQ6ZVE7 132 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 EXOC3-AS1Q8N2X6 119 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 ARL6IP6Q8N6S5 226 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 TMEM75Q8N9X5 138 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 LINC00479Q96M42 142 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 PRSS22Q9GZN4 317 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 SAV1Q9H4B6 383 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-211ENST00000523062 V9GYV3 84 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 HELZ2Q9BYK8 2649 aaKnown RBP5.28□□□□□ -1.56
CSMD1-211ENST00000523062 TACC2O95359 2948 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 ABCA12Q86UK0 2595 aa5.28□□□□□ -1.56
CSMD1-211ENST00000523062 ZNF320A2RRD8 509 aa5.27□□□□□ -1.57
CSMD1-211ENST00000523062 CLPSL1A2RUU4 121 aa5.27□□□□□ -1.57
CSMD1-211ENST00000523062 FBLL1A6NHQ2 334 aaKnown RBP5.27□□□□□ -1.57
CSMD1-211ENST00000523062 ZNF705GA8MUZ8 300 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-211ENST00000523062 SMAD7O15105 426 aaKnown RBP5.27□□□□□ -1.57
CSMD1-211ENST00000523062 HOXA3O43365 443 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-211ENST00000523062 BUB3O43684 328 aa5.27□□□□□ -1.57
CSMD1-211ENST00000523062 GATCO43716 136 aaKnown RBP5.27□□□□□ -1.57
CSMD1-211ENST00000523062 IGHG4P01861 327 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms