RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 DNAJC4Q9NNZ3 241 aa12.94□□□□□ -0.34
CLK4-211ENST00000522556 RPRMQ9NS64 109 aa12.94□□□□□ -0.34
CLK4-211ENST00000522556 DYNC2H1Q8NCM8 4307 aaKnown RBP12.93□□□□□ -0.34
CLK4-211ENST00000522556 ELOA3CA0A087WX78 387 aaPredicted RBP12.93□□□□□ -0.34
CLK4-211ENST00000522556 IGHV4-28A0A0C4DH34 117 aa12.93□□□□□ -0.34
CLK4-211ENST00000522556 ZNF705EA8MWA4 302 aaPredicted RBP12.93□□□□□ -0.34
CLK4-211ENST00000522556 IGLC2P0DOY2 106 aa12.93□□□□□ -0.34
CLK4-211ENST00000522556 S100A7P31151 101 aa12.93□□□□□ -0.34
CLK4-211ENST00000522556 AMTNQ6UX39 209 aa12.93□□□□□ -0.34
CLK4-211ENST00000522556 Q6ZRG5 221 aa12.93□□□□□ -0.34
CLK4-211ENST00000522556 MED28Q9H204 178 aa12.93□□□□□ -0.34
CLK4-211ENST00000522556 RPL12P30050 165 aaKnown RBP12.92□□□□□ -0.34
CLK4-211ENST00000522556 ZNF738Q8NE65 137 aa12.92□□□□□ -0.34
CLK4-211ENST00000522556 ATP5SQ99766 215 aa12.92□□□□□ -0.34
CLK4-211ENST00000522556 C11orf68Q9H3H3 251 aaKnown RBP12.92□□□□□ -0.34
CLK4-211ENST00000522556 RYR3Q15413 4870 aa12.91□□□□□ -0.34
CLK4-211ENST00000522556 CXorf65A6NEN9 183 aa12.91□□□□□ -0.34
CLK4-211ENST00000522556 A8MTW9 85 aa12.91□□□□□ -0.34
CLK4-211ENST00000522556 PET100P0DJ07 73 aa12.91□□□□□ -0.34
CLK4-211ENST00000522556 CNN1P51911 297 aaKnown RBP12.91□□□□□ -0.34
CLK4-211ENST00000522556 NANOS2P60321 138 aaKnown RBP12.91□□□□□ -0.34
CLK4-211ENST00000522556 SAMD13Q5VXD3 122 aa12.91□□□□□ -0.34
CLK4-211ENST00000522556 EBLN2Q6P2I7 272 aa12.91□□□□□ -0.34
CLK4-211ENST00000522556 BPIFA4PQ86YQ2 179 aa12.91□□□□□ -0.34
CLK4-211ENST00000522556 OR1L4Q8NGR5 311 aa12.91□□□□□ -0.34
CLK4-211ENST00000522556 MFFQ9GZY8 342 aa12.91□□□□□ -0.34
CLK4-211ENST00000522556 ZNF331Q9NQX6 463 aaPredicted RBP12.91□□□□□ -0.34
CLK4-211ENST00000522556 ZNF705FA8MVS1 300 aaPredicted RBP12.9□□□□□ -0.34
CLK4-211ENST00000522556 MPDU1O75352 247 aa12.9□□□□□ -0.34
CLK4-211ENST00000522556 PYYP10082 97 aa12.9□□□□□ -0.34
CLK4-211ENST00000522556 OXA1LQ15070 435 aa12.9□□□□□ -0.34
CLK4-211ENST00000522556 PSG3Q16557 428 aa12.9□□□□□ -0.34
CLK4-211ENST00000522556 RGS21Q2M5E4 152 aa12.9□□□□□ -0.34
CLK4-211ENST00000522556 TMEM41BQ5BJD5 291 aa12.9□□□□□ -0.34
CLK4-211ENST00000522556 MIR17HGQ75NE6 70 aa12.9□□□□□ -0.34
CLK4-211ENST00000522556 CLUHP3Q96NS8 147 aa12.9□□□□□ -0.34
CLK4-211ENST00000522556 PFDN5Q99471 154 aa12.9□□□□□ -0.34
CLK4-211ENST00000522556 ZNF586Q9NXT0 402 aa12.9□□□□□ -0.34
CLK4-211ENST00000522556 IGHV3OR16-12A0A075B7B8 117 aa12.89□□□□□ -0.35
CLK4-211ENST00000522556 PRAC2D3DTV9 90 aa12.89□□□□□ -0.35
CLK4-211ENST00000522556 M0R2Z0 102 aa12.89□□□□□ -0.35
CLK4-211ENST00000522556 EIF3GO75821 320 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLK4-211ENST00000522556 PSG9Q00887 426 aa12.89□□□□□ -0.35
CLK4-211ENST00000522556 SPINK13Q1W4C9 94 aa12.89□□□□□ -0.35
CLK4-211ENST00000522556 LCN15Q6UWW0 184 aa12.89□□□□□ -0.35
CLK4-211ENST00000522556 ZNF705AQ6ZN79 300 aaPredicted RBP12.89□□□□□ -0.35
CLK4-211ENST00000522556 SAT2Q96F10 170 aaPredicted RBP12.89□□□□□ -0.35
CLK4-211ENST00000522556 SLC25A2Q9BXI2 301 aa12.89□□□□□ -0.35
CLK4-211ENST00000522556 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
CLK4-211ENST00000522556 NUTF2P61970 127 aaKnown RBP12.88□□□□□ -0.35
CLK4-211ENST00000522556 HIST1H1AQ02539 215 aaPredicted RBP12.88□□□□□ -0.35
CLK4-211ENST00000522556 S100A7AQ86SG5 101 aa12.88□□□□□ -0.35
CLK4-211ENST00000522556 C1orf158Q8N1D5 194 aa12.88□□□□□ -0.35
CLK4-211ENST00000522556 OR8A1Q8NGG7 326 aa12.88□□□□□ -0.35
CLK4-211ENST00000522556 LRRC20Q8TCA0 184 aa12.88□□□□□ -0.35
CLK4-211ENST00000522556 FAM167A-AS1Q96KT0 104 aa12.88□□□□□ -0.35
CLK4-211ENST00000522556 C1QTNF4Q9BXJ3 329 aa12.88□□□□□ -0.35
CLK4-211ENST00000522556 HRH4Q9H3N8 390 aa12.88□□□□□ -0.35
CLK4-211ENST00000522556 SACSQ9NZJ4 4579 aa12.87□□□□□ -0.35
CLK4-211ENST00000522556 CXCL2P19875 107 aa12.87□□□□□ -0.35
CLK4-211ENST00000522556 BAP18Q8IXM2 172 aa12.87□□□□□ -0.35
CLK4-211ENST00000522556 RPUSD4Q96CM3 377 aaKnown RBP12.87□□□□□ -0.35
CLK4-211ENST00000522556 PARD6GQ9BYG4 376 aaPredicted RBP12.87□□□□□ -0.35
CLK4-211ENST00000522556 LCE6AA0A183 80 aa12.86□□□□□ -0.35
CLK4-211ENST00000522556 G3V3Q6 166 aa12.86□□□□□ -0.35
CLK4-211ENST00000522556 CRXO43186 299 aaPredicted RBP12.86□□□□□ -0.35
CLK4-211ENST00000522556 NDUFB4O95168 129 aa12.86□□□□□ -0.35
CLK4-211ENST00000522556 PRM2P04554 102 aa12.86□□□□□ -0.35
CLK4-211ENST00000522556 MIFP14174 115 aa12.86□□□□□ -0.35
CLK4-211ENST00000522556 ZNF767PQ75MW2 155 aa12.86□□□□□ -0.35
CLK4-211ENST00000522556 C11orf45Q8TAV5 145 aa12.86□□□□□ -0.35
CLK4-211ENST00000522556 SLC50A1Q9BRV3 221 aa12.86□□□□□ -0.35
CLK4-211ENST00000522556 TRAV12-2A0A075B6T6 113 aa12.85□□□□□ -0.35
CLK4-211ENST00000522556 GIPP09681 153 aaPredicted RBP12.85□□□□□ -0.35
CLK4-211ENST00000522556 FFAR4Q5NUL3 377 aa12.85□□□□□ -0.35
CLK4-211ENST00000522556 PHLDA1Q8WV24 401 aaPredicted RBP12.85□□□□□ -0.35
CLK4-211ENST00000522556 RNF24Q9Y225 148 aa12.85□□□□□ -0.35
CLK4-211ENST00000522556 TRBV19A0A075B6N1 114 aa12.84□□□□□ -0.35
CLK4-211ENST00000522556 M0R3E3 92 aa12.84□□□□□ -0.35
CLK4-211ENST00000522556 DUSP14O95147 198 aaKnown RBP12.84□□□□□ -0.35
CLK4-211ENST00000522556 KIR3DS1Q14943 382 aa12.84□□□□□ -0.35
CLK4-211ENST00000522556 CEMP1Q6PRD7 247 aaPredicted RBP12.84□□□□□ -0.35
CLK4-211ENST00000522556 BLNKQ8WV28 456 aa12.84□□□□□ -0.35
CLK4-211ENST00000522556 ZNF503Q96F45 646 aa12.84□□□□□ -0.35
CLK4-211ENST00000522556 LYSTQ99698 3801 aa12.84□□□□□ -0.35
CLK4-211ENST00000522556 TMEM14CQ9P0S9 112 aa12.84□□□□□ -0.35
CLK4-211ENST00000522556 RYR2Q92736 4967 aa12.84□□□□□ -0.35
CLK4-211ENST00000522556 RNF222A6NCQ9 220 aa12.83□□□□□ -0.36
CLK4-211ENST00000522556 BOLA2-SMG1P6H3BVE0 249 aa12.83□□□□□ -0.36
CLK4-211ENST00000522556 OR10J4P0C629 311 aa12.83□□□□□ -0.36
CLK4-211ENST00000522556 EXOC3-AS1Q8N2X6 119 aa12.83□□□□□ -0.36
CLK4-211ENST00000522556 IGF2BP2-AS1Q96M15 143 aa12.83□□□□□ -0.36
CLK4-211ENST00000522556 AQP10Q96PS8 301 aa12.83□□□□□ -0.36
CLK4-211ENST00000522556 PLECQ15149 4684 aaKnown RBP12.82□□□□□ -0.36
CLK4-211ENST00000522556 NUPR2A6NF83 97 aa12.82□□□□□ -0.36
CLK4-211ENST00000522556 C17orf112F2Z3M2 114 aa12.82□□□□□ -0.36
CLK4-211ENST00000522556 SMLR1H3BR10 107 aa12.82□□□□□ -0.36
CLK4-211ENST00000522556 IFNA5P01569 189 aa12.82□□□□□ -0.36
CLK4-211ENST00000522556 HIST1H1EP10412 219 aaKnown RBP12.82□□□□□ -0.36
CLK4-211ENST00000522556 EMP1P54849 157 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms