RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 SCGNO76038 276 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 OR2F1Q13607 317 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 LINC01556Q5JQF7 62 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 CCDC28AQ8IWP9 274 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 DHRSXQ8N5I4 330 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 ZNF738Q8NE65 137 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 ST6GAL2Q96JF0 529 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 TP53RKQ96S44 253 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 C20orf144Q9BQM9 153 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 ENY2Q9NPA8 101 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 HHLA3Q9XRX5 114 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 KLF12Q9Y4X4 402 aa5.72□□□□□ -1.49
TRAPPC9-212ENST00000521944 IGKV1OR2-108A0A075B7D4 117 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 TRGV1A0A0A0MS02 117 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 IGHV3-38A0A0C4DH36 116 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 SPINK4O60575 86 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 CIB2O75838 187 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 CXCL3P19876 107 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 GALR1P47211 349 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 KRTAP10-8P60410 259 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 SPCS3P61009 180 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 ZNF415Q09FC8 603 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 KLF9Q13886 244 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 C8orf59Q8N0T1 100 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 THAP8Q8NA92 274 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 LINC01600Q96MT4 127 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 MGLLQ99685 303 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 C1orf43Q9BWL3 253 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 MRPL32Q9BYC8 188 aaKnown RBP5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 SLC25A22Q9H936 323 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 S100A14Q9HCY8 104 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 CRCT1Q9UGL9 99 aa5.71□□□□□ -1.5
TRAPPC9-212ENST00000521944 SNRPGP15A8MWD9 76 aa5.7□□□□□ -1.5
TRAPPC9-212ENST00000521944 E5RGE8 158 aa5.7□□□□□ -1.5
TRAPPC9-212ENST00000521944 F5H697 171 aa5.7□□□□□ -1.5
TRAPPC9-212ENST00000521944 NMSQ5H8A3 153 aa5.7□□□□□ -1.5
TRAPPC9-212ENST00000521944 C22orf42Q6IC83 251 aa5.7□□□□□ -1.5
TRAPPC9-212ENST00000521944 ETFRF1Q6IPR1 90 aa5.7□□□□□ -1.5
TRAPPC9-212ENST00000521944 TMEM182Q6ZP80 229 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC9-212ENST00000521944 BAALCQ8WXS3 180 aa5.7□□□□□ -1.5
TRAPPC9-212ENST00000521944 PPP1R14BQ96C90 147 aa5.7□□□□□ -1.5
TRAPPC9-212ENST00000521944 PDCD10Q9BUL8 212 aa5.7□□□□□ -1.5
TRAPPC9-212ENST00000521944 HEYLQ9NQ87 328 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC9-212ENST00000521944 LINC00854A0A1B0GVQ3 168 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 TRDV1A0A1B0GX56 115 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 RBFOX3A6NFN3 312 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 ZFP92A6NM28 416 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 PRAC2D3DTV9 90 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 MYL9P24844 172 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 SRIP30626 198 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 CBX5P45973 191 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 AKR1C2P52895 323 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 IDNKQ5T6J7 187 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 MORN5Q5VZ52 161 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 C9orf47Q6ZRZ4 202 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 SPARTQ8N0X7 666 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 OR4D5Q8NGN0 318 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 ZNF431Q8TF32 576 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 BLNKQ8WV28 456 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 RBPMSQ93062 196 aaKnown RBP5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 DUSP21Q9H596 190 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 PPP1R14DQ9NXH3 145 aa5.69□□□□□ -1.5
TRAPPC9-212ENST00000521944 TRAV12-3A0A0B4J271 114 aa5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 RNF222A6NCQ9 220 aa5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 PANO1I0J062 215 aa5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 HRH1P35367 487 aa5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 UCP3P55916 312 aa5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 FGL1Q08830 312 aa5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 SP6Q3SY56 376 aa5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 TDRG1Q3Y452 100 aa5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 ZBTB8BQ8NAP8 495 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 OR1B1Q8NGR6 318 aa5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 OR5H2Q8NGV7 314 aa5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 RPUSD4Q96CM3 377 aaKnown RBP5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 COX11Q9Y6N1 276 aa5.68□□□□□ -1.5
TRAPPC9-212ENST00000521944 LOC100131303A0A0U1RQF7 123 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 J3KRW8 73 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 IGHV3-30P01768 117 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 IGHV3-33P01772 117 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 CT45A10P0DMU9 189 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 IGHV3-30-3P0DP02 117 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 IGHV3-30-5P0DP03 117 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 HLA-DMAP28067 261 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 RND3P61587 244 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 SLAQ13239 276 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 LPCAT3Q6P1A2 487 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 LHFPL5Q8TAF8 219 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 TRGV9Q99603 122 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 VGLL1Q99990 258 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 PYGO2Q9BRQ0 406 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 IFT46Q9NQC8 304 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 DIABLOQ9NR28 239 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 NDUFB11Q9NX14 153 aa5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 MRPL16Q9NX20 251 aaKnown RBP5.67□□□□□ -1.5
TRAPPC9-212ENST00000521944 A0A0A6YYH2 397 aa5.66□□□□□ -1.5
TRAPPC9-212ENST00000521944 A6NJ64 397 aa5.66□□□□□ -1.5
TRAPPC9-212ENST00000521944 SFTA3P0C7M3 94 aa5.66□□□□□ -1.5
TRAPPC9-212ENST00000521944 TNFSF8P32971 234 aa5.66□□□□□ -1.5
TRAPPC9-212ENST00000521944 TCL1AP56279 114 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms