RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 ZNF878C9JN71 531 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 MFNGO00587 321 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 XKRYO14609 159 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 GATCO43716 136 aaKnown RBP2.6□□□□□ -1.99
VPS13B-208ENST00000521037 SRSF10O75494 262 aaKnown RBP2.6□□□□□ -1.99
VPS13B-208ENST00000521037 HLA-AP01891 365 aaKnown RBP2.6□□□□□ -1.99
VPS13B-208ENST00000521037 MT-ND4LP03901 98 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 CD3DP04234 171 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 CSN2P05814 226 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 GYPBP06028 91 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 S100A6P06703 90 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 P0C879 139 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 CBLN1P23435 193 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 ZBTB25P24278 435 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 S100PP25815 95 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 HTR2CP28335 458 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 GNG10P50151 68 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 RAB5CP51148 216 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 CAV2P51636 162 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 APOC4P55056 127 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 TPPP2P59282 170 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 SURF2Q15527 256 aaPredicted RBP2.6□□□□□ -1.99
VPS13B-208ENST00000521037 VAMP3Q15836 100 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 TMEM128Q5BJH2 165 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 RNASE10Q5GAN6 216 aaKnown RBP2.6□□□□□ -1.99
VPS13B-208ENST00000521037 C1orf100Q5SVJ3 147 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 DNLZQ5SXM8 178 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 TMEM244Q5VVB8 128 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 DNM1P34Q6PK57 102 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 NOTCH2NLQ7Z3S9 236 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 CCDC54Q8NEL0 328 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 OR51L1Q8NGJ5 315 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 OR52E5Q8NH55 327 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 PPP1R1CQ8WVI7 109 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 SMIM8Q96KF7 97 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 AQP10Q96PS8 301 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 ZNF251Q9BRH9 671 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 ATG5Q9H1Y0 275 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 SAV1Q9H4B6 383 aaPredicted RBP2.6□□□□□ -1.99
VPS13B-208ENST00000521037 SPACA1Q9HBV2 294 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 TREM1Q9NP99 234 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 UQCC1Q9NVA1 299 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 FAM206AQ9NX38 181 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 COA4Q9NYJ1 87 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 CALYQ9NYX4 217 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 IDI2-AS1Q9NZ38 188 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 ZNF581Q9P0T4 197 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 TRAV8-7A0A075B6U6 113 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 DEFB131BA0A096LNP1 70 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 TRGV10A0A0A0MS01 117 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 A0A0G2JLM5 398 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 A0A1B0GW64 132 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 C9orf170A2RU37 121 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 C1orf196B1AJZ1 125 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 SIVA1O15304 175 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 NUPL2O15504 423 aaKnown RBP2.59□□□□□ -1.99
VPS13B-208ENST00000521037 CA11O75493 328 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 SIX6O95475 246 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 OR2H2O95918 312 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 TRGV3P03979 118 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 MAS1P04201 325 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 CD5P06127 495 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 IGFBP3P17936 291 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-208ENST00000521037 NFYBP25208 207 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 HSD11B1P28845 292 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 SSTR5P35346 364 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 RPL29P47914 159 aaKnown RBP2.59□□□□□ -1.99
VPS13B-208ENST00000521037 AKR1D1P51857 326 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 CLDN12P56749 244 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 TAS2R46P59540 309 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 PEA15Q15121 130 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 RHEBQ15382 184 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 TMEM30BQ3MIR4 351 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 CT45A1Q5HYN5 189 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 PRSS54Q6PEW0 395 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 ASCL4Q6XD76 172 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 PUSL1Q8N0Z8 303 aaKnown RBP2.59□□□□□ -1.99
VPS13B-208ENST00000521037 TCTEX1D1Q8N7M0 179 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 CSNK1G2-AS1Q8NCQ2 148 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 LFNGQ8NES3 379 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 OR51T1Q8NGJ9 327 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 OR5D14Q8NGL3 314 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 OR1S2Q8NGQ3 325 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 TERB2Q8NHR7 220 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 CT45A3Q8NHU0 189 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 DEFB104AQ8WTQ1 72 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 SFT2D1Q8WV19 159 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 METTL1Q9UBP6 276 aaKnown RBP2.59□□□□□ -1.99
VPS13B-208ENST00000521037 CACNG5Q9UF02 275 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 ZNF230Q9UIE0 474 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-208ENST00000521037 ANAPC10Q9UM13 185 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 AMMECR1Q9Y4X0 333 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-208ENST00000521037 R4GMQ9 66 aa2.59□□□□□ -1.99
VPS13B-208ENST00000521037 MUC17Q685J3 4493 aa2.58□□□□□ -2
VPS13B-208ENST00000521037 IGKV1-9A0A0C4DH69 117 aa2.58□□□□□ -2
VPS13B-208ENST00000521037 A8MWP6 167 aa2.58□□□□□ -2
VPS13B-208ENST00000521037 MRPS12O15235 138 aaKnown RBP2.58□□□□□ -2
VPS13B-208ENST00000521037 TGOLN2O43493 480 aa2.58□□□□□ -2
VPS13B-208ENST00000521037 RPP14O95059 124 aaKnown RBP2.58□□□□□ -2
VPS13B-208ENST00000521037 IFNA10P01566 189 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms