RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 BTCP35070 178 aa13.85□□□□□ -0.19
PABPC1-215ENST00000520804 TAS2R30P59541 319 aa13.85□□□□□ -0.19
PABPC1-215ENST00000520804 RHOBP62745 196 aa13.85□□□□□ -0.19
PABPC1-215ENST00000520804 SLC38A11Q08AI6 406 aa13.85□□□□□ -0.19
PABPC1-215ENST00000520804 PSG3Q16557 428 aa13.85□□□□□ -0.19
PABPC1-215ENST00000520804 IAH1Q2TAA2 248 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-215ENST00000520804 TEPPQ6URK8 271 aa13.85□□□□□ -0.19
PABPC1-215ENST00000520804 SDHCQ99643 169 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-215ENST00000520804 ARV1Q9H2C2 271 aa13.85□□□□□ -0.19
PABPC1-215ENST00000520804 MGAT4CQ9UBM8 478 aa13.85□□□□□ -0.19
PABPC1-215ENST00000520804 RNF24Q9Y225 148 aa13.85□□□□□ -0.19
PABPC1-215ENST00000520804 NACAE9PAV3 2078 aa13.85□□□□□ -0.19
PABPC1-215ENST00000520804 MRPS12O15235 138 aaKnown RBP13.84□□□□□ -0.19
PABPC1-215ENST00000520804 DEFB130BP0DP73 79 aa13.84□□□□□ -0.19
PABPC1-215ENST00000520804 DEFB130AP0DP74 79 aa13.84□□□□□ -0.19
PABPC1-215ENST00000520804 ZBTB8BQ8NAP8 495 aaPredicted RBP13.84□□□□□ -0.19
PABPC1-215ENST00000520804 LRRC20Q8TCA0 184 aa13.84□□□□□ -0.19
PABPC1-215ENST00000520804 PPP1R14DQ9NXH3 145 aa13.84□□□□□ -0.19
PABPC1-215ENST00000520804 CENPXA8MT69 81 aa13.83□□□□□ -0.2
PABPC1-215ENST00000520804 FAM3BP58499 235 aaPredicted RBP13.83□□□□□ -0.2
PABPC1-215ENST00000520804 SOHLH1Q5JUK2 328 aa13.83□□□□□ -0.2
PABPC1-215ENST00000520804 PXDC1Q5TGL8 231 aa13.83□□□□□ -0.2
PABPC1-215ENST00000520804 TMEM256Q8N2U0 113 aa13.83□□□□□ -0.2
PABPC1-215ENST00000520804 MITD1Q8WV92 249 aa13.83□□□□□ -0.2
PABPC1-215ENST00000520804 LINC01587Q99440 93 aa13.83□□□□□ -0.2
PABPC1-215ENST00000520804 RCL1Q9Y2P8 373 aaKnown RBP13.83□□□□□ -0.2
PABPC1-215ENST00000520804 CXCL2P19875 107 aa13.82□□□□□ -0.2
PABPC1-215ENST00000520804 TAS2R60P59551 318 aa13.82□□□□□ -0.2
PABPC1-215ENST00000520804 ARL16Q0P5N6 197 aa13.82□□□□□ -0.2
PABPC1-215ENST00000520804 FCN2Q15485 313 aa13.82□□□□□ -0.2
PABPC1-215ENST00000520804 ZNF546Q86UE3 836 aa13.82□□□□□ -0.2
PABPC1-215ENST00000520804 RPUSD4Q96CM3 377 aaKnown RBP13.82□□□□□ -0.2
PABPC1-215ENST00000520804 GGACTQ9BVM4 153 aa13.82□□□□□ -0.2
PABPC1-215ENST00000520804 GSKIPQ9P0R6 139 aa13.82□□□□□ -0.2
PABPC1-215ENST00000520804 GOSR2O14653 212 aa13.81□□□□□ -0.2
PABPC1-215ENST00000520804 PRB4P10163 310 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-215ENST00000520804 LINC00305Q7Z4B0 112 aa13.81□□□□□ -0.2
PABPC1-215ENST00000520804 ZNF331Q9NQX6 463 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-215ENST00000520804 C7orf66A4D0T2 115 aa13.8□□□□□ -0.2
PABPC1-215ENST00000520804 F5H768 121 aa13.8□□□□□ -0.2
PABPC1-215ENST00000520804 AGPAT2O15120 278 aa13.8□□□□□ -0.2
PABPC1-215ENST00000520804 MBPP02686 304 aaPredicted RBP13.8□□□□□ -0.2
PABPC1-215ENST00000520804 CDKN1BP46527 198 aa13.8□□□□□ -0.2
PABPC1-215ENST00000520804 CNPY1Q3B7I2 92 aa13.8□□□□□ -0.2
PABPC1-215ENST00000520804 C1orf134Q5TEV5 83 aa13.8□□□□□ -0.2
PABPC1-215ENST00000520804 LCN15Q6UWW0 184 aa13.8□□□□□ -0.2
PABPC1-215ENST00000520804 C16orf74Q96GX8 76 aa13.8□□□□□ -0.2
PABPC1-215ENST00000520804 ATG101Q9BSB4 218 aa13.8□□□□□ -0.2
PABPC1-215ENST00000520804 CBY3A6NI87 242 aa13.79□□□□□ -0.2
PABPC1-215ENST00000520804 ATP5G1P05496 136 aa13.79□□□□□ -0.2
PABPC1-215ENST00000520804 IL7P13232 177 aa13.79□□□□□ -0.2
PABPC1-215ENST00000520804 HTN1P15515 57 aa13.79□□□□□ -0.2
PABPC1-215ENST00000520804 ATP5G3P48201 142 aa13.79□□□□□ -0.2
PABPC1-215ENST00000520804 SLC50A1Q9BRV3 221 aa13.79□□□□□ -0.2
PABPC1-215ENST00000520804 SNRPCP09234 159 aaKnown RBP13.78□□□□□ -0.2
PABPC1-215ENST00000520804 BPIFA4PQ86YQ2 179 aa13.78□□□□□ -0.2
PABPC1-215ENST00000520804 TMEM37Q8WXS4 190 aa13.78□□□□□ -0.2
PABPC1-215ENST00000520804 MGST2Q99735 147 aa13.78□□□□□ -0.2
PABPC1-215ENST00000520804 TIMM8BQ9Y5J9 83 aaPredicted RBP13.78□□□□□ -0.2
PABPC1-215ENST00000520804 COX7A2P2O60397 106 aa13.77□□□□□ -0.21
PABPC1-215ENST00000520804 NUDT3O95989 172 aa13.77□□□□□ -0.21
PABPC1-215ENST00000520804 MORN5Q5VZ52 161 aa13.77□□□□□ -0.21
PABPC1-215ENST00000520804 ZNF493Q6ZR52 646 aa13.77□□□□□ -0.21
PABPC1-215ENST00000520804 RNASE8Q8TDE3 154 aaKnown RBP13.77□□□□□ -0.21
PABPC1-215ENST00000520804 C20orf85Q9H1P6 137 aa13.77□□□□□ -0.21
PABPC1-215ENST00000520804 H7BYZ3 331 aa13.76□□□□□ -0.21
PABPC1-215ENST00000520804 L7N2F9 121 aa13.76□□□□□ -0.21
PABPC1-215ENST00000520804 CCSO14618 274 aa13.76□□□□□ -0.21
PABPC1-215ENST00000520804 VAMP2P63027 116 aa13.76□□□□□ -0.21
PABPC1-215ENST00000520804 OPCMLQ14982 345 aa13.76□□□□□ -0.21
PABPC1-215ENST00000520804 ZNRF2Q8NHG8 242 aa13.76□□□□□ -0.21
PABPC1-215ENST00000520804 TMEM263Q8WUH6 116 aaKnown RBP13.76□□□□□ -0.21
PABPC1-215ENST00000520804 C20orf144Q9BQM9 153 aa13.76□□□□□ -0.21
PABPC1-215ENST00000520804 RYR1P21817 5038 aa13.75□□□□□ -0.21
PABPC1-215ENST00000520804 PRAC2D3DTV9 90 aa13.75□□□□□ -0.21
PABPC1-215ENST00000520804 SLC17A3O00476 420 aa13.75□□□□□ -0.21
PABPC1-215ENST00000520804 PLA2G10O15496 165 aa13.75□□□□□ -0.21
PABPC1-215ENST00000520804 IGLC2P0DOY2 106 aa13.75□□□□□ -0.21
PABPC1-215ENST00000520804 ZNF846Q147U1 533 aa13.75□□□□□ -0.21
PABPC1-215ENST00000520804 KIR3DS1Q14943 382 aa13.75□□□□□ -0.21
PABPC1-215ENST00000520804 C10orf113Q5VZT2 155 aa13.75□□□□□ -0.21
PABPC1-215ENST00000520804 OR10J6PQ8NGY7 276 aa13.75□□□□□ -0.21
PABPC1-215ENST00000520804 NOP10Q9NPE3 64 aaKnown RBP13.75□□□□□ -0.21
PABPC1-215ENST00000520804 H3BTX0 84 aa13.74□□□□□ -0.21
PABPC1-215ENST00000520804 CAMLGP49069 296 aa13.74□□□□□ -0.21
PABPC1-215ENST00000520804 CCL18P55774 89 aa13.74□□□□□ -0.21
PABPC1-215ENST00000520804 RAB31Q13636 194 aa13.74□□□□□ -0.21
PABPC1-215ENST00000520804 ZNF575Q86XF7 245 aa13.74□□□□□ -0.21
PABPC1-215ENST00000520804 RNF141Q8WVD5 230 aa13.74□□□□□ -0.21
PABPC1-215ENST00000520804 SAT2Q96F10 170 aaPredicted RBP13.74□□□□□ -0.21
PABPC1-215ENST00000520804 PARD6GQ9BYG4 376 aaPredicted RBP13.74□□□□□ -0.21
PABPC1-215ENST00000520804 LSM5Q9Y4Y9 91 aaKnown RBP13.74□□□□□ -0.21
PABPC1-215ENST00000520804 PXMP4Q9Y6I8 212 aa13.74□□□□□ -0.21
PABPC1-215ENST00000520804 NBDYA0A0U1RRE5 68 aa13.73□□□□□ -0.21
PABPC1-215ENST00000520804 H3BQ15 152 aa13.73□□□□□ -0.21
PABPC1-215ENST00000520804 BCAP31P51572 246 aa13.73□□□□□ -0.21
PABPC1-215ENST00000520804 GFI1BQ5VTD9 330 aa13.73□□□□□ -0.21
PABPC1-215ENST00000520804 Q6ZRG5 221 aa13.73□□□□□ -0.21
PABPC1-215ENST00000520804 NRARPQ7Z6K4 114 aa13.73□□□□□ -0.21
PABPC1-215ENST00000520804 DNAJC4Q9NNZ3 241 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms