RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 H0YIZ8 118 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 SOCS3O14543 225 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 COX7A2P2O60397 106 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 OR5G3P0C626 314 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 ZNF688P0C7X2 276 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 GATA2P23769 480 aaPredicted RBP6.04□□□□□ -1.44
NEDD4-210ENST00000513957 B2MP61769 119 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 NUTF2P61970 127 aaKnown RBP6.04□□□□□ -1.44
NEDD4-210ENST00000513957 OPCMLQ14982 345 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 TRPT1Q86TN4 253 aaKnown RBP6.04□□□□□ -1.44
NEDD4-210ENST00000513957 BPIFA4PQ86YQ2 179 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 APRG1Q8IVJ8 170 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 NUDT10Q8NFP7 164 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 NUDT11Q96G61 164 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 ATP5SQ99766 215 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 RNF126Q9BV68 326 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 C1QTNF4Q9BXJ3 329 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 NPCDR1Q9BY65 106 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 PARD6GQ9BYG4 376 aaPredicted RBP6.04□□□□□ -1.44
NEDD4-210ENST00000513957 CSTL1Q9H114 145 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 SLC25A22Q9H936 323 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 CLEC5AQ9NY25 188 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 PLA2G2DQ9UNK4 145 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 HSPB11Q9Y547 144 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 AGRNO00468 2067 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 TRIAP1O43715 76 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 HLA-DRB4P13762 266 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 CXCL3P19876 107 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 FGF7P21781 194 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 RPL12P30050 165 aaKnown RBP6.03□□□□□ -1.44
NEDD4-210ENST00000513957 NHLH2Q02577 135 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 PSMG4Q5JS54 123 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 C10orf113Q5VZT2 155 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 FOXI2Q6ZQN5 318 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 LINC00305Q7Z4B0 112 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 FAM24BQ8N5W8 94 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 ZNF709Q8N972 641 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 OR11H7Q8NGC8 314 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 IL17DQ8TAD2 202 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 SCRT1Q9BWW7 348 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 WDR61Q9GZS3 305 aaKnown RBP6.03□□□□□ -1.44
NEDD4-210ENST00000513957 DNAJC4Q9NNZ3 241 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 RPRMQ9NS64 109 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 SLC39A9Q9NUM3 307 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 DOK5Q9P104 306 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 MBD2Q9UBB5 411 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 HLA-DRB4X5D2U9 266 aa6.03□□□□□ -1.44
NEDD4-210ENST00000513957 F5H697 171 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 C3orf84H3BNL1 204 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 SPRY2O43597 315 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 ZNF253O75346 499 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 ZNF266Q14584 549 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 FCN2Q15485 313 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 GUK1Q16774 197 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 MIC13Q5XKP0 118 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 LEMD1Q68G75 181 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 LCN15Q6UWW0 184 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 RNF183Q96D59 192 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 AQP10Q96PS8 301 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 UHRF2Q96PU4 802 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 OVOL2Q9BRP0 275 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 SLC50A1Q9BRV3 221 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 MRPL32Q9BYC8 188 aaKnown RBP6.02□□□□□ -1.45
NEDD4-210ENST00000513957 SAV1Q9H4B6 383 aaPredicted RBP6.02□□□□□ -1.45
NEDD4-210ENST00000513957 EDA2RQ9HAV5 297 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 PXMP4Q9Y6I8 212 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 STAB2Q8WWQ8 2551 aa6.02□□□□□ -1.45
NEDD4-210ENST00000513957 MRPS12O15235 138 aaKnown RBP6.01□□□□□ -1.45
NEDD4-210ENST00000513957 CA1P00915 261 aaPredicted RBP6.01□□□□□ -1.45
NEDD4-210ENST00000513957 IFNA5P01569 189 aa6.01□□□□□ -1.45
NEDD4-210ENST00000513957 RPL35AP18077 110 aaKnown RBP6.01□□□□□ -1.45
NEDD4-210ENST00000513957 PDE6HQ13956 83 aa6.01□□□□□ -1.45
NEDD4-210ENST00000513957 CLINT1Q14677 625 aa6.01□□□□□ -1.45
NEDD4-210ENST00000513957 DEFB135Q30KP9 77 aa6.01□□□□□ -1.45
NEDD4-210ENST00000513957 ACTL10Q5JWF8 245 aa6.01□□□□□ -1.45
NEDD4-210ENST00000513957 SERTAD4-AS1Q5TG53 156 aa6.01□□□□□ -1.45
NEDD4-210ENST00000513957 EBLN2Q6P2I7 272 aa6.01□□□□□ -1.45
NEDD4-210ENST00000513957 PATE2Q6UY27 113 aa6.01□□□□□ -1.45
NEDD4-210ENST00000513957 SCGB1C1Q8TD33 95 aa6.01□□□□□ -1.45
NEDD4-210ENST00000513957 TMEM37Q8WXS4 190 aa6.01□□□□□ -1.45
NEDD4-210ENST00000513957 RSG1Q9BU20 258 aa6.01□□□□□ -1.45
NEDD4-210ENST00000513957 A8MTW9 85 aa6□□□□□ -1.45
NEDD4-210ENST00000513957 H3BMM0 161 aa6□□□□□ -1.45
NEDD4-210ENST00000513957 DUSP14O95147 198 aaKnown RBP6□□□□□ -1.45
NEDD4-210ENST00000513957 AMBPP02760 352 aa6□□□□□ -1.45
NEDD4-210ENST00000513957 IGLC2P0DOY2 106 aa6□□□□□ -1.45
NEDD4-210ENST00000513957 ZNF124Q15973 351 aa6□□□□□ -1.45
NEDD4-210ENST00000513957 INO80EQ8NBZ0 244 aaPredicted RBP6□□□□□ -1.45
NEDD4-210ENST00000513957 MUC7Q8TAX7 377 aa6□□□□□ -1.45
NEDD4-210ENST00000513957 C11orf68Q9H3H3 251 aaKnown RBP6□□□□□ -1.45
NEDD4-210ENST00000513957 TMEM14CQ9P0S9 112 aa6□□□□□ -1.45
NEDD4-210ENST00000513957 TIMM9Q9Y5J7 89 aa6□□□□□ -1.45
NEDD4-210ENST00000513957 TENM3Q9P273 2699 aa6□□□□□ -1.45
NEDD4-210ENST00000513957 A0A0J9YX75 114 aa5.99□□□□□ -1.45
NEDD4-210ENST00000513957 FAM78BQ5VT40 261 aa5.99□□□□□ -1.45
NEDD4-210ENST00000513957 NHLRC2Q8NBF2 726 aa5.99□□□□□ -1.45
NEDD4-210ENST00000513957 OR2T35Q8NGX2 323 aa5.99□□□□□ -1.45
NEDD4-210ENST00000513957 LRRC20Q8TCA0 184 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms