RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 B2MP61769 119 aa7.01□□□□□ -1.29
RNF4-221ENST00000513643 NUTF2P61970 127 aaKnown RBP7.01□□□□□ -1.29
RNF4-221ENST00000513643 LRRC37A5PQ49AS3 106 aa7.01□□□□□ -1.29
RNF4-221ENST00000513643 FAM78BQ5VT40 261 aa7.01□□□□□ -1.29
RNF4-221ENST00000513643 C10orf113Q5VZT2 155 aa7.01□□□□□ -1.29
RNF4-221ENST00000513643 IGFL4Q6B9Z1 124 aa7.01□□□□□ -1.29
RNF4-221ENST00000513643 Q6ZRG5 221 aa7.01□□□□□ -1.29
RNF4-221ENST00000513643 C1QTNF4Q9BXJ3 329 aa7.01□□□□□ -1.29
RNF4-221ENST00000513643 WDR61Q9GZS3 305 aaKnown RBP7.01□□□□□ -1.29
RNF4-221ENST00000513643 ZNF331Q9NQX6 463 aaPredicted RBP7.01□□□□□ -1.29
RNF4-221ENST00000513643 CLEC5AQ9NY25 188 aa7.01□□□□□ -1.29
RNF4-221ENST00000513643 TRAV5A0A0B4J249 113 aa7□□□□□ -1.29
RNF4-221ENST00000513643 IGHV4-28A0A0C4DH34 117 aa7□□□□□ -1.29
RNF4-221ENST00000513643 UBE2L5PA0A1B0GUS4 154 aa7□□□□□ -1.29
RNF4-221ENST00000513643 CRXO43186 299 aaPredicted RBP7□□□□□ -1.29
RNF4-221ENST00000513643 COX7A2P2O60397 106 aa7□□□□□ -1.29
RNF4-221ENST00000513643 FGF7P21781 194 aa7□□□□□ -1.29
RNF4-221ENST00000513643 HLA-DMBP28068 263 aa7□□□□□ -1.29
RNF4-221ENST00000513643 PSG9Q00887 426 aa7□□□□□ -1.29
RNF4-221ENST00000513643 OXA1LQ15070 435 aa7□□□□□ -1.29
RNF4-221ENST00000513643 PSG3Q16557 428 aa7□□□□□ -1.29
RNF4-221ENST00000513643 CEMP1Q6PRD7 247 aaPredicted RBP7□□□□□ -1.29
RNF4-221ENST00000513643 BPIFA4PQ86YQ2 179 aa7□□□□□ -1.29
RNF4-221ENST00000513643 C1orf158Q8N1D5 194 aa7□□□□□ -1.29
RNF4-221ENST00000513643 RNF182Q8N6D2 247 aa7□□□□□ -1.29
RNF4-221ENST00000513643 OR11H7Q8NGC8 314 aa7□□□□□ -1.29
RNF4-221ENST00000513643 OR1L4Q8NGR5 311 aa7□□□□□ -1.29
RNF4-221ENST00000513643 FAM167A-AS1Q96KT0 104 aa7□□□□□ -1.29
RNF4-221ENST00000513643 PFDN5Q99471 154 aa7□□□□□ -1.29
RNF4-221ENST00000513643 PARD6GQ9BYG4 376 aaPredicted RBP7□□□□□ -1.29
RNF4-221ENST00000513643 SLC35B3Q9H1N7 401 aa7□□□□□ -1.29
RNF4-221ENST00000513643 TMEM14CQ9P0S9 112 aa7□□□□□ -1.29
RNF4-221ENST00000513643 XCL2Q9UBD3 114 aa7□□□□□ -1.29
RNF4-221ENST00000513643 HSPB11Q9Y547 144 aa7□□□□□ -1.29
RNF4-221ENST00000513643 PXMP4Q9Y6I8 212 aa7□□□□□ -1.29
RNF4-221ENST00000513643 EPPK1P58107 5090 aaKnown RBP6.99□□□□□ -1.29
RNF4-221ENST00000513643 SMIM9A6NGZ8 99 aa6.99□□□□□ -1.29
RNF4-221ENST00000513643 ZNF253O75346 499 aa6.99□□□□□ -1.29
RNF4-221ENST00000513643 RPL12P30050 165 aaKnown RBP6.99□□□□□ -1.29
RNF4-221ENST00000513643 CNN1P51911 297 aaKnown RBP6.99□□□□□ -1.29
RNF4-221ENST00000513643 FCN2Q15485 313 aa6.99□□□□□ -1.29
RNF4-221ENST00000513643 GCSAMLQ5JQS6 135 aa6.99□□□□□ -1.29
RNF4-221ENST00000513643 EBLN2Q6P2I7 272 aa6.99□□□□□ -1.29
RNF4-221ENST00000513643 LCN15Q6UWW0 184 aa6.99□□□□□ -1.29
RNF4-221ENST00000513643 THAP6Q8TBB0 222 aa6.99□□□□□ -1.29
RNF4-221ENST00000513643 ATP5SQ99766 215 aa6.99□□□□□ -1.29
RNF4-221ENST00000513643 WFDC1Q9HC57 220 aa6.99□□□□□ -1.29
RNF4-221ENST00000513643 ZNF586Q9NXT0 402 aa6.99□□□□□ -1.29
RNF4-221ENST00000513643 MBD2Q9UBB5 411 aa6.99□□□□□ -1.29
RNF4-221ENST00000513643 SLC17A3O00476 420 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 DEFB4AO15263 64 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 DUSP14O95147 198 aaKnown RBP6.98□□□□□ -1.29
RNF4-221ENST00000513643 NDUFB4O95168 129 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 PET100P0DJ07 73 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 CLINT1Q14677 625 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 GUK1Q16774 197 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 Q5BKY6 102 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 OR4B1Q8NGF8 309 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 OR8A1Q8NGG7 326 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 C11orf45Q8TAV5 145 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 ASB13Q8WXK3 278 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 SLC50A1Q9BRV3 221 aa6.98□□□□□ -1.29
RNF4-221ENST00000513643 TRBV19A0A075B6N1 114 aa6.97□□□□□ -1.29
RNF4-221ENST00000513643 NUPR2A6NF83 97 aa6.97□□□□□ -1.29
RNF4-221ENST00000513643 IGKV3-20P01619 116 aa6.97□□□□□ -1.29
RNF4-221ENST00000513643 HIST1H1EP10412 219 aaKnown RBP6.97□□□□□ -1.29
RNF4-221ENST00000513643 NANOS2P60321 138 aaKnown RBP6.97□□□□□ -1.29
RNF4-221ENST00000513643 FGL1Q08830 312 aa6.97□□□□□ -1.29
RNF4-221ENST00000513643 PDE6HQ13956 83 aa6.97□□□□□ -1.29
RNF4-221ENST00000513643 PHLDA1Q8WV24 401 aaPredicted RBP6.97□□□□□ -1.29
RNF4-221ENST00000513643 RPUSD4Q96CM3 377 aaKnown RBP6.97□□□□□ -1.29
RNF4-221ENST00000513643 IGF2BP2-AS1Q96M15 143 aa6.97□□□□□ -1.29
RNF4-221ENST00000513643 SLC25A2Q9BXI2 301 aa6.97□□□□□ -1.29
RNF4-221ENST00000513643 MFFQ9GZY8 342 aa6.97□□□□□ -1.29
RNF4-221ENST00000513643 PRAC2D3DTV9 90 aa6.96□□□□□ -1.3
RNF4-221ENST00000513643 G3V3Q6 166 aa6.96□□□□□ -1.3
RNF4-221ENST00000513643 AMBPP02760 352 aa6.96□□□□□ -1.3
RNF4-221ENST00000513643 SNRPCP09234 159 aaKnown RBP6.96□□□□□ -1.3
RNF4-221ENST00000513643 GIPP09681 153 aaPredicted RBP6.96□□□□□ -1.3
RNF4-221ENST00000513643 FXYD7P58549 80 aa6.96□□□□□ -1.3
RNF4-221ENST00000513643 RGS21Q2M5E4 152 aa6.96□□□□□ -1.3
RNF4-221ENST00000513643 ZNF738Q8NE65 137 aa6.96□□□□□ -1.3
RNF4-221ENST00000513643 MRPL53Q96EL3 112 aaKnown RBP6.96□□□□□ -1.3
RNF4-221ENST00000513643 ZNF503Q96F45 646 aa6.96□□□□□ -1.3
RNF4-221ENST00000513643 AQP10Q96PS8 301 aa6.96□□□□□ -1.3
RNF4-221ENST00000513643 MED28Q9H204 178 aa6.96□□□□□ -1.3
RNF4-221ENST00000513643 DNAH2Q9P225 4427 aa6.96□□□□□ -1.3
RNF4-221ENST00000513643 CXorf65A6NEN9 183 aa6.95□□□□□ -1.3
RNF4-221ENST00000513643 H3BTX0 84 aa6.95□□□□□ -1.3
RNF4-221ENST00000513643 C12orf74Q32Q52 190 aa6.95□□□□□ -1.3
RNF4-221ENST00000513643 MIR17HGQ75NE6 70 aa6.95□□□□□ -1.3
RNF4-221ENST00000513643 FXYD5Q96DB9 178 aa6.95□□□□□ -1.3
RNF4-221ENST00000513643 FAM19A4Q96LR4 140 aa6.95□□□□□ -1.3
RNF4-221ENST00000513643 MRPL32Q9BYC8 188 aaKnown RBP6.95□□□□□ -1.3
RNF4-221ENST00000513643 KCNIP2Q9NS61 270 aa6.95□□□□□ -1.3
RNF4-221ENST00000513643 CELA1Q9UNI1 258 aa6.95□□□□□ -1.3
RNF4-221ENST00000513643 FUT9Q9Y231 359 aa6.95□□□□□ -1.3
RNF4-221ENST00000513643 PLAC8L1A1L4L8 177 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 TMEM189A5PLL7 270 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 C11orf94C9JXX5 98 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms