RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 BCAP31P51572 246 aa10.18□□□□□ -0.78
RAB28-205ENST00000508274 VAMP2P63027 116 aa10.18□□□□□ -0.78
RAB28-205ENST00000508274 MORN5Q5VZ52 161 aa10.18□□□□□ -0.78
RAB28-205ENST00000508274 ZNF546Q86UE3 836 aa10.18□□□□□ -0.78
RAB28-205ENST00000508274 IGF2BP2-AS1Q96M15 143 aa10.18□□□□□ -0.78
RAB28-205ENST00000508274 C11orf1Q9H5F2 150 aa10.18□□□□□ -0.78
RAB28-205ENST00000508274 YTHDF2Q9Y5A9 579 aaKnown RBP10.18□□□□□ -0.78
RAB28-205ENST00000508274 TRAV12-2A0A075B6T6 113 aa10.17□□□□□ -0.78
RAB28-205ENST00000508274 FAM24AA6NFZ4 105 aa10.17□□□□□ -0.78
RAB28-205ENST00000508274 CST7O76096 145 aa10.17□□□□□ -0.78
RAB28-205ENST00000508274 DUSP14O95147 198 aaKnown RBP10.17□□□□□ -0.78
RAB28-205ENST00000508274 H2AFB2P0C5Z0 115 aa10.17□□□□□ -0.78
RAB28-205ENST00000508274 CAV2P51636 162 aa10.17□□□□□ -0.78
RAB28-205ENST00000508274 RRN3P1Q2M238 152 aa10.17□□□□□ -0.78
RAB28-205ENST00000508274 LINC00305Q7Z4B0 112 aa10.17□□□□□ -0.78
RAB28-205ENST00000508274 C12orf45Q8N5I9 185 aaPredicted RBP10.17□□□□□ -0.78
RAB28-205ENST00000508274 NIPSNAP3BQ9BS92 247 aa10.17□□□□□ -0.78
RAB28-205ENST00000508274 TMEM208Q9BTX3 173 aa10.17□□□□□ -0.78
RAB28-205ENST00000508274 NDUFAF3Q9BU61 184 aa10.17□□□□□ -0.78
RAB28-205ENST00000508274 HIST1H1AQ02539 215 aaPredicted RBP10.16□□□□□ -0.78
RAB28-205ENST00000508274 TMEM37Q8WXS4 190 aa10.16□□□□□ -0.78
RAB28-205ENST00000508274 C2orf50Q96LR7 162 aa10.16□□□□□ -0.78
RAB28-205ENST00000508274 GGACTQ9BVM4 153 aa10.16□□□□□ -0.78
RAB28-205ENST00000508274 HECTD4Q9Y4D8 3996 aa10.16□□□□□ -0.78
RAB28-205ENST00000508274 FAM240BA0A1B0GVZ2 78 aa10.15□□□□□ -0.78
RAB28-205ENST00000508274 ZNF705GA8MUZ8 300 aaPredicted RBP10.15□□□□□ -0.78
RAB28-205ENST00000508274 H3BTX0 84 aa10.15□□□□□ -0.78
RAB28-205ENST00000508274 INSP01308 110 aa10.15□□□□□ -0.78
RAB28-205ENST00000508274 S100A10P60903 97 aa10.15□□□□□ -0.78
RAB28-205ENST00000508274 PSG3Q16557 428 aa10.15□□□□□ -0.78
RAB28-205ENST00000508274 OR8A1Q8NGG7 326 aa10.15□□□□□ -0.78
RAB28-205ENST00000508274 LRRC20Q8TCA0 184 aa10.15□□□□□ -0.78
RAB28-205ENST00000508274 BOLA2-SMG1P6H3BVE0 249 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 SLC17A3O00476 420 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 COX7A2P2O60397 106 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 HTN3P15516 51 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 RAB32Q13637 225 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 OPCMLQ14982 345 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 PXDC1Q5TGL8 231 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 NRARPQ7Z6K4 114 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 S100A7AQ86SG5 101 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 TEX48A0A1B0GUV7 120 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 IGSF23A1L1A6 192 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 CAMLGP49069 296 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 RHOBP62745 196 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 IL15RAQ13261 267 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 MIC13Q5XKP0 118 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 RPUSD4Q96CM3 377 aaKnown RBP10.14□□□□□ -0.79
RAB28-205ENST00000508274 ZNF331Q9NQX6 463 aaPredicted RBP10.14□□□□□ -0.79
RAB28-205ENST00000508274 WDR83OSQ9Y284 106 aa10.14□□□□□ -0.79
RAB28-205ENST00000508274 UBE2L5PA0A1B0GUS4 154 aa10.13□□□□□ -0.79
RAB28-205ENST00000508274 P0DMU3 169 aa10.13□□□□□ -0.79
RAB28-205ENST00000508274 FAM231AP0DMU4 169 aa10.13□□□□□ -0.79
RAB28-205ENST00000508274 FAM231CP0DMU5 169 aa10.13□□□□□ -0.79
RAB28-205ENST00000508274 AZU1P20160 251 aa10.13□□□□□ -0.79
RAB28-205ENST00000508274 C10orf113Q5VZT2 155 aa10.13□□□□□ -0.79
RAB28-205ENST00000508274 LCN15Q6UWW0 184 aa10.13□□□□□ -0.79
RAB28-205ENST00000508274 LYRM2Q9NU23 88 aaPredicted RBP10.13□□□□□ -0.79
RAB28-205ENST00000508274 UQCC1Q9NVA1 299 aa10.13□□□□□ -0.79
RAB28-205ENST00000508274 DNAH2Q9P225 4427 aa10.13□□□□□ -0.79
RAB28-205ENST00000508274 TRAV5A0A0B4J249 113 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 PLAC8L1A1L4L8 177 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 IGLC2P0DOY2 106 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 CXCL2P19875 107 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 DAD1P61803 113 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 ASAH1Q13510 395 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 OXA1LQ15070 435 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 VWC2Q2TAL6 325 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 MZT2BQ6NZ67 158 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 BPIFA4PQ86YQ2 179 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 TMEM252Q8N6L7 170 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 POM121L12Q8N7R1 296 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 S100ZQ8WXG8 99 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 SLC50A1Q9BRV3 221 aa10.12□□□□□ -0.79
RAB28-205ENST00000508274 PARD6GQ9BYG4 376 aaPredicted RBP10.12□□□□□ -0.79
RAB28-205ENST00000508274 NACAE9PAV3 2078 aa10.11□□□□□ -0.79
RAB28-205ENST00000508274 PRAC2D3DTV9 90 aa10.11□□□□□ -0.79
RAB28-205ENST00000508274 H3BQ15 152 aa10.11□□□□□ -0.79
RAB28-205ENST00000508274 PVALBP20472 110 aaPredicted RBP10.11□□□□□ -0.79
RAB28-205ENST00000508274 SULT1A1P50225 295 aa10.11□□□□□ -0.79
RAB28-205ENST00000508274 BAXQ07812 192 aa10.11□□□□□ -0.79
RAB28-205ENST00000508274 KIR3DS1Q14943 382 aa10.11□□□□□ -0.79
RAB28-205ENST00000508274 LINC00299Q6ZSB3 139 aa10.11□□□□□ -0.79
RAB28-205ENST00000508274 DNAJC4Q9NNZ3 241 aa10.11□□□□□ -0.79
RAB28-205ENST00000508274 PPP1R14DQ9NXH3 145 aa10.11□□□□□ -0.79
RAB28-205ENST00000508274 RNF24Q9Y225 148 aa10.11□□□□□ -0.79
RAB28-205ENST00000508274 FAT2Q9NYQ8 4349 aa10.11□□□□□ -0.79
RAB28-205ENST00000508274 SIX6O95475 246 aa10.1□□□□□ -0.79
RAB28-205ENST00000508274 IFITM3Q01628 133 aa10.1□□□□□ -0.79
RAB28-205ENST00000508274 FCN2Q15485 313 aa10.1□□□□□ -0.79
RAB28-205ENST00000508274 Q6ZRG5 221 aa10.1□□□□□ -0.79
RAB28-205ENST00000508274 SAT2Q96F10 170 aaPredicted RBP10.1□□□□□ -0.79
RAB28-205ENST00000508274 SLC39A9Q9NUM3 307 aa10.1□□□□□ -0.79
RAB28-205ENST00000508274 M0R2N4 97 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 UPK1BO75841 260 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 S100A11P31949 105 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 CDKN1BP46527 198 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 B2MP61769 119 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 RAB31Q13636 194 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 TMEM88Q6PEY1 159 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms