RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-261	ENST00000507901	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.96	□□□□□ -0.49
DDR1-261	ENST00000507901	TIMM9	Q9Y5J7	89 aa		11.96	□□□□□ -0.49
DDR1-261	ENST00000507901		F6UB75	175 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	SMLR1	H3BR10	107 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	SLC17A3	O00476	420 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	SPRY2	O43597	315 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	ZNF266	Q14584	549 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	FAM78B	Q5VT40	261 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	MORN3	Q6PF18	240 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	LCN15	Q6UWW0	184 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	MIR17HG	Q75NE6	70 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	RNF182	Q8N6D2	247 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	ZNF709	Q8N972	641 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	CSNK1G2-AS1	Q8NCQ2	148 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	OR11H4	Q8NGC9	324 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	SCGB1C1	Q8TD33	95 aa		11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	MRPL32	Q9BYC8	188 aa	Known RBP	11.95	□□□□□ -0.5
DDR1-261	ENST00000507901	ZNF253	O75346	499 aa		11.94	□□□□□ -0.5
DDR1-261	ENST00000507901	CA1	P00915	261 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-261	ENST00000507901	HLA-DMB	P28068	263 aa		11.94	□□□□□ -0.5
DDR1-261	ENST00000507901	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-261	ENST00000507901	OR2G3	Q8NGZ4	309 aa		11.94	□□□□□ -0.5
DDR1-261	ENST00000507901	ZNF503	Q96F45	646 aa		11.94	□□□□□ -0.5
DDR1-261	ENST00000507901	SLC50A1	Q9BRV3	221 aa		11.94	□□□□□ -0.5
DDR1-261	ENST00000507901	RPRM	Q9NS64	109 aa		11.94	□□□□□ -0.5
DDR1-261	ENST00000507901	ZNF586	Q9NXT0	402 aa		11.94	□□□□□ -0.5
DDR1-261	ENST00000507901	FUT9	Q9Y231	359 aa		11.94	□□□□□ -0.5
DDR1-261	ENST00000507901	CSMD3	Q7Z407	3707 aa		11.93	□□□□□ -0.5
DDR1-261	ENST00000507901	NDUFB4	O95168	129 aa		11.93	□□□□□ -0.5
DDR1-261	ENST00000507901	PSG3	Q16557	428 aa		11.93	□□□□□ -0.5
DDR1-261	ENST00000507901	GUK1	Q16774	197 aa		11.93	□□□□□ -0.5
DDR1-261	ENST00000507901	TMEM41B	Q5BJD5	291 aa		11.93	□□□□□ -0.5
DDR1-261	ENST00000507901	FFAR4	Q5NUL3	377 aa		11.93	□□□□□ -0.5
DDR1-261	ENST00000507901	AMTN	Q6UX39	209 aa		11.93	□□□□□ -0.5
DDR1-261	ENST00000507901	MUC7	Q8TAX7	377 aa		11.93	□□□□□ -0.5
DDR1-261	ENST00000507901	ST6GAL2	Q96JF0	529 aa		11.93	□□□□□ -0.5
DDR1-261	ENST00000507901	PSMG3	Q9BT73	122 aa	Predicted RBP	11.93	□□□□□ -0.5
DDR1-261	ENST00000507901	TRBV19	A0A075B6N1	114 aa		11.92	□□□□□ -0.5
DDR1-261	ENST00000507901	SNRPC	P09234	159 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-261	ENST00000507901	PYY	P10082	97 aa		11.92	□□□□□ -0.5
DDR1-261	ENST00000507901	HIST1H1E	P10412	219 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-261	ENST00000507901	CYTL1	Q9NRR1	136 aa		11.92	□□□□□ -0.5
DDR1-261	ENST00000507901	HMSD	A8MTL9	139 aa		11.91	□□□□□ -0.5
DDR1-261	ENST00000507901		H3BTX0	84 aa		11.91	□□□□□ -0.5
DDR1-261	ENST00000507901	ATP6V0C	P27449	155 aa		11.91	□□□□□ -0.5
DDR1-261	ENST00000507901	PDE6H	Q13956	83 aa		11.91	□□□□□ -0.5
DDR1-261	ENST00000507901	ZNF345	Q14585	488 aa		11.91	□□□□□ -0.5
DDR1-261	ENST00000507901	RPL7L1	Q6DKI1	246 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-261	ENST00000507901	FXYD5	Q96DB9	178 aa		11.91	□□□□□ -0.5
DDR1-261	ENST00000507901	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-261	ENST00000507901	ARPC5	O15511	151 aa		11.9	□□□□□ -0.5
DDR1-261	ENST00000507901	M6PR	P20645	277 aa		11.9	□□□□□ -0.5
DDR1-261	ENST00000507901	HSD17B11	Q8NBQ5	300 aa		11.9	□□□□□ -0.5
DDR1-261	ENST00000507901	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.9	□□□□□ -0.51
DDR1-261	ENST00000507901	CNN1	P51911	297 aa	Known RBP	11.89	□□□□□ -0.51
DDR1-261	ENST00000507901	RAB2A	P61019	212 aa		11.89	□□□□□ -0.51
DDR1-261	ENST00000507901	RHOB	P62745	196 aa		11.89	□□□□□ -0.51
DDR1-261	ENST00000507901	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.89	□□□□□ -0.51
DDR1-261	ENST00000507901	EBLN2	Q6P2I7	272 aa		11.89	□□□□□ -0.51
DDR1-261	ENST00000507901	KCNRG	Q8N5I3	272 aa		11.89	□□□□□ -0.51
DDR1-261	ENST00000507901	OR8A1	Q8NGG7	326 aa		11.89	□□□□□ -0.51
DDR1-261	ENST00000507901	MFF	Q9GZY8	342 aa		11.89	□□□□□ -0.51
DDR1-261	ENST00000507901	SH3BGRL3	Q9H299	93 aa		11.89	□□□□□ -0.51
DDR1-261	ENST00000507901	OR51M1	Q9H341	326 aa		11.89	□□□□□ -0.51
DDR1-261	ENST00000507901	CLEC5A	Q9NY25	188 aa		11.89	□□□□□ -0.51
DDR1-261	ENST00000507901		X6R8D5	127 aa		11.89	□□□□□ -0.51
DDR1-261	ENST00000507901	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	PRAC2	D3DTV9	90 aa		11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	TAAR5	O14804	337 aa		11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	SERF2	P84101	59 aa		11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	PSG9	Q00887	426 aa		11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	CASC10	Q5T4H9	136 aa		11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	TCTE3	Q8IZS6	198 aa		11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	RPP25L	Q8N5L8	163 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	ZNF738	Q8NE65	137 aa		11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	RPUSD4	Q96CM3	377 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	MRPL53	Q96EL3	112 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	PAXX	Q9BUH6	204 aa		11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	SLC35B3	Q9H1N7	401 aa		11.88	□□□□□ -0.51
DDR1-261	ENST00000507901	STARD9	Q9P2P6	4700 aa		11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	DUSP14	O95147	198 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	IGKV3-20	P01619	116 aa		11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	ZNF705D	P0CH99	300 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	ZNF705B	P0CI00	300 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	NUTF2	P61970	127 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-261	ENST00000507901		Q8NAQ8	132 aa		11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	OR4B1	Q8NGF8	309 aa		11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	OR11H2	Q8NH07	326 aa		11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	LRRC20	Q8TCA0	184 aa		11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	RARRES2	Q99969	163 aa		11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	C1QTNF4	Q9BXJ3	329 aa		11.87	□□□□□ -0.51
DDR1-261	ENST00000507901	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.86	□□□□□ -0.51
DDR1-261	ENST00000507901	CRX	O43186	299 aa	Predicted RBP	11.86	□□□□□ -0.51
DDR1-261	ENST00000507901	EIF3G	O75821	320 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
DDR1-261	ENST00000507901	JTB	O76095	146 aa		11.86	□□□□□ -0.51
DDR1-261	ENST00000507901	NBEAP1	P0C6P0	100 aa		11.86	□□□□□ -0.51
DDR1-261	ENST00000507901	KHDC3L	Q587J8	217 aa		11.86	□□□□□ -0.51
DDR1-261	ENST00000507901	OR10G4	Q8NGN3	311 aa		11.86	□□□□□ -0.51
DDR1-261	ENST00000507901	OR10G9	Q8NGN4	311 aa		11.86	□□□□□ -0.51

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