RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 LGALS9BQ3B8N2 356 aa10.27□□□□□ -0.77
HMGCS1-203ENST00000507004 GSG1LQ6UXU4 331 aa10.27□□□□□ -0.77
HMGCS1-203ENST00000507004 Q6ZRG5 221 aa10.27□□□□□ -0.77
HMGCS1-203ENST00000507004 ZNF431Q8TF32 576 aaPredicted RBP10.27□□□□□ -0.77
HMGCS1-203ENST00000507004 CCDC32Q9BV29 185 aa10.27□□□□□ -0.77
HMGCS1-203ENST00000507004 AGPAT2O15120 278 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 CRXO43186 299 aaPredicted RBP10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 COX7A2P2O60397 106 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 TAS2R60P59551 318 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 HIST1H1AQ02539 215 aaPredicted RBP10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 SLC38A11Q08AI6 406 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 SOHLH1Q5JUK2 328 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 ZNF493Q6ZR52 646 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 LINC00305Q7Z4B0 112 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 RNF182Q8N6D2 247 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 OR1L4Q8NGR5 311 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 UHRF2Q96PU4 802 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 PXMP4Q9Y6I8 212 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 VPS13DQ5THJ4 4388 aa10.26□□□□□ -0.77
HMGCS1-203ENST00000507004 M0R2Z0 102 aa10.25□□□□□ -0.77
HMGCS1-203ENST00000507004 PLA2G10O15496 165 aa10.25□□□□□ -0.77
HMGCS1-203ENST00000507004 CCNKO75909 580 aa10.25□□□□□ -0.77
HMGCS1-203ENST00000507004 CDKN1BP46527 198 aa10.25□□□□□ -0.77
HMGCS1-203ENST00000507004 BCAP31P51572 246 aa10.25□□□□□ -0.77
HMGCS1-203ENST00000507004 GUK1Q16774 197 aa10.25□□□□□ -0.77
HMGCS1-203ENST00000507004 C12orf45Q8N5I9 185 aaPredicted RBP10.25□□□□□ -0.77
HMGCS1-203ENST00000507004 RPUSD4Q96CM3 377 aaKnown RBP10.25□□□□□ -0.77
HMGCS1-203ENST00000507004 C2orf50Q96LR7 162 aa10.25□□□□□ -0.77
HMGCS1-203ENST00000507004 PFDN5Q99471 154 aa10.25□□□□□ -0.77
HMGCS1-203ENST00000507004 ZNF331Q9NQX6 463 aaPredicted RBP10.25□□□□□ -0.77
HMGCS1-203ENST00000507004 C5orf51A6NDU8 294 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 MRPS12O15235 138 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 HTN3P15516 51 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 CAMLGP49069 296 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 CAV2P51636 162 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 HBG1P69891 147 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 HBG2P69892 147 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 C10orf113Q5VZT2 155 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 PATE2Q6UY27 113 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 C16orf74Q96GX8 76 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 LINC01587Q99440 93 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 DNAJC4Q9NNZ3 241 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 UQCC1Q9NVA1 299 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 LSM5Q9Y4Y9 91 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 DNAH6Q9C0G6 4158 aa10.24□□□□□ -0.77
HMGCS1-203ENST00000507004 DNAH10Q8IVF4 4471 aa10.23□□□□□ -0.77
HMGCS1-203ENST00000507004 FAM25EA8MYX2 175 aa10.23□□□□□ -0.77
HMGCS1-203ENST00000507004 H7BYZ3 331 aa10.23□□□□□ -0.77
HMGCS1-203ENST00000507004 S100A11P31949 105 aa10.23□□□□□ -0.77
HMGCS1-203ENST00000507004 ATP6V1FQ16864 119 aa10.23□□□□□ -0.77
HMGCS1-203ENST00000507004 IGFL4Q6B9Z1 124 aa10.23□□□□□ -0.77
HMGCS1-203ENST00000507004 MZT2BQ6NZ67 158 aa10.23□□□□□ -0.77
HMGCS1-203ENST00000507004 STX12Q86Y82 276 aa10.23□□□□□ -0.77
HMGCS1-203ENST00000507004 OR10J6PQ8NGY7 276 aa10.23□□□□□ -0.77
HMGCS1-203ENST00000507004 NUDT15Q9NV35 164 aa10.23□□□□□ -0.77
HMGCS1-203ENST00000507004 TRAV6A0A075B6T7 132 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 FAM240BA0A1B0GVZ2 78 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 ZNF705GA8MUZ8 300 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 ZNF253O75346 499 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 MPDU1O75352 247 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 ATP5G1P05496 136 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 H2AFB2P0C5Z0 115 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 ATP5G3P48201 142 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 SULT1A1P50225 295 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 ARL16Q0P5N6 197 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 TMEM88Q6PEY1 159 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 BAP18Q8IXM2 172 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 CHAC2Q8WUX2 184 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 S100ZQ8WXG8 99 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 ODF3Q96PU9 254 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 MGST2Q99735 147 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 WDR83OSQ9Y284 106 aa10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 TIMM8BQ9Y5J9 83 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-203ENST00000507004 CBY3A6NI87 242 aa10.21□□□□□ -0.77
HMGCS1-203ENST00000507004 CCSO14618 274 aa10.21□□□□□ -0.77
HMGCS1-203ENST00000507004 RPL29P47914 159 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-203ENST00000507004 VWC2Q2TAL6 325 aa10.21□□□□□ -0.77
HMGCS1-203ENST00000507004 NRARPQ7Z6K4 114 aa10.21□□□□□ -0.77
HMGCS1-203ENST00000507004 CCDC28AQ8IWP9 274 aa10.21□□□□□ -0.77
HMGCS1-203ENST00000507004 TMEM263Q8WUH6 116 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-203ENST00000507004 TMEM37Q8WXS4 190 aa10.21□□□□□ -0.77
HMGCS1-203ENST00000507004 LYRM2Q9NU23 88 aaPredicted RBP10.21□□□□□ -0.77
HMGCS1-203ENST00000507004 TRAV12-2A0A075B6T6 113 aa10.2□□□□□ -0.78
HMGCS1-203ENST00000507004 IGLC2P0DOY2 106 aa10.2□□□□□ -0.78
HMGCS1-203ENST00000507004 OPCMLQ14982 345 aa10.2□□□□□ -0.78
HMGCS1-203ENST00000507004 MRPL53Q96EL3 112 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-203ENST00000507004 ATG101Q9BSB4 218 aa10.2□□□□□ -0.78
HMGCS1-203ENST00000507004 GPN1Q9HCN4 374 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-203ENST00000507004 FRAS1Q86XX4 4008 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 FAM24AA6NFZ4 105 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 PRSS29PA6NIE9 313 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 CST7O76096 145 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 DEFB130BP0DP73 79 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 DEFB130AP0DP74 79 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 LEPP41159 167 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 S100A10P60903 97 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 TMEM252Q8N6L7 170 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 SEC22CQ9BRL7 303 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 C11orf1Q9H5F2 150 aa10.19□□□□□ -0.78
HMGCS1-203ENST00000507004 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms