RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 ZNF266Q14584 549 aa13.31□□□□□ -0.28
NPHP4-210ENST00000506941 LCN15Q6UWW0 184 aa13.31□□□□□ -0.28
NPHP4-210ENST00000506941 FOXI2Q6ZQN5 318 aa13.31□□□□□ -0.28
NPHP4-210ENST00000506941 OR11H4Q8NGC9 324 aa13.31□□□□□ -0.28
NPHP4-210ENST00000506941 FAM167A-AS1Q96KT0 104 aa13.31□□□□□ -0.28
NPHP4-210ENST00000506941 HRH4Q9H3N8 390 aa13.31□□□□□ -0.28
NPHP4-210ENST00000506941 RPRMQ9NS64 109 aa13.31□□□□□ -0.28
NPHP4-210ENST00000506941 PYYP10082 97 aa13.3□□□□□ -0.28
NPHP4-210ENST00000506941 CXCL2P19875 107 aa13.3□□□□□ -0.28
NPHP4-210ENST00000506941 HSD17B11Q8NBQ5 300 aa13.3□□□□□ -0.28
NPHP4-210ENST00000506941 RNF183Q96D59 192 aa13.3□□□□□ -0.28
NPHP4-210ENST00000506941 SAT2Q96F10 170 aaPredicted RBP13.3□□□□□ -0.28
NPHP4-210ENST00000506941 ZNF331Q9NQX6 463 aaPredicted RBP13.3□□□□□ -0.28
NPHP4-210ENST00000506941 ZNF586Q9NXT0 402 aa13.3□□□□□ -0.28
NPHP4-210ENST00000506941 TMEM14CQ9P0S9 112 aa13.3□□□□□ -0.28
NPHP4-210ENST00000506941 TIMM9Q9Y5J7 89 aa13.3□□□□□ -0.28
NPHP4-210ENST00000506941 A0A0J9YX75 114 aa13.29□□□□□ -0.28
NPHP4-210ENST00000506941 SPRY2O43597 315 aa13.29□□□□□ -0.28
NPHP4-210ENST00000506941 PRB4P10163 310 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-210ENST00000506941 RPL7L1Q6DKI1 246 aaKnown RBP13.29□□□□□ -0.28
NPHP4-210ENST00000506941 ST6GAL2Q96JF0 529 aa13.29□□□□□ -0.28
NPHP4-210ENST00000506941 WWC2-AS2Q96NR7 200 aa13.29□□□□□ -0.28
NPHP4-210ENST00000506941 MRPL32Q9BYC8 188 aaKnown RBP13.29□□□□□ -0.28
NPHP4-210ENST00000506941 FUT9Q9Y231 359 aa13.29□□□□□ -0.28
NPHP4-210ENST00000506941 TP53TG1Q9Y2A0 90 aa13.29□□□□□ -0.28
NPHP4-210ENST00000506941 IGKV3-20P01619 116 aa13.28□□□□□ -0.28
NPHP4-210ENST00000506941 SPP1P10451 314 aa13.28□□□□□ -0.28
NPHP4-210ENST00000506941 ATP6V0CP27449 155 aa13.28□□□□□ -0.28
NPHP4-210ENST00000506941 MORN3Q6PF18 240 aaPredicted RBP13.28□□□□□ -0.28
NPHP4-210ENST00000506941 LRRC20Q8TCA0 184 aa13.28□□□□□ -0.28
NPHP4-210ENST00000506941 SLC50A1Q9BRV3 221 aa13.28□□□□□ -0.28
NPHP4-210ENST00000506941 EDA2RQ9HAV5 297 aa13.28□□□□□ -0.28
NPHP4-210ENST00000506941 CSMD3Q7Z407 3707 aa13.27□□□□□ -0.28
NPHP4-210ENST00000506941 EIF3GO75821 320 aaKnown RBP eCLIP13.27□□□□□ -0.29
NPHP4-210ENST00000506941 RAB2AP61019 212 aa13.27□□□□□ -0.29
NPHP4-210ENST00000506941 PSG3Q16557 428 aa13.27□□□□□ -0.29
NPHP4-210ENST00000506941 ZNF738Q8NE65 137 aa13.27□□□□□ -0.29
NPHP4-210ENST00000506941 MFFQ9GZY8 342 aa13.27□□□□□ -0.29
NPHP4-210ENST00000506941 SH3BGRL3Q9H299 93 aa13.27□□□□□ -0.29
NPHP4-210ENST00000506941 TRBV19A0A075B6N1 114 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 A8MTW9 85 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 NDUFB4O95168 129 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 ZNF705DP0CH99 300 aaPredicted RBP13.26□□□□□ -0.29
NPHP4-210ENST00000506941 ZNF705BP0CI00 300 aaPredicted RBP13.26□□□□□ -0.29
NPHP4-210ENST00000506941 HIST1H1EP10412 219 aaKnown RBP13.26□□□□□ -0.29
NPHP4-210ENST00000506941 M6PRP20645 277 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 RHOBP62745 196 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 GUK1Q16774 197 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 EBLN2Q6P2I7 272 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 OR4B1Q8NGF8 309 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 OR2G3Q8NGZ4 309 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 ZNF503Q96F45 646 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 CLUHP3Q96NS8 147 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 PSMG3Q9BT73 122 aaPredicted RBP13.26□□□□□ -0.29
NPHP4-210ENST00000506941 CYTL1Q9NRR1 136 aa13.26□□□□□ -0.29
NPHP4-210ENST00000506941 hCG_2014768A0A024R1R8 64 aa13.25□□□□□ -0.29
NPHP4-210ENST00000506941 HMSDA8MTL9 139 aa13.25□□□□□ -0.29
NPHP4-210ENST00000506941 ZNF705FA8MVS1 300 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-210ENST00000506941 ZNF345Q14585 488 aa13.25□□□□□ -0.29
NPHP4-210ENST00000506941 ACOT6Q3I5F7 207 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-210ENST00000506941 CSNK1G2-AS1Q8NCQ2 148 aa13.25□□□□□ -0.29
NPHP4-210ENST00000506941 FXYD5Q96DB9 178 aa13.25□□□□□ -0.29
NPHP4-210ENST00000506941 CLEC5AQ9NY25 188 aa13.25□□□□□ -0.29
NPHP4-210ENST00000506941 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
NPHP4-210ENST00000506941 ZNF253O75346 499 aa13.24□□□□□ -0.29
NPHP4-210ENST00000506941 OR10J4P0C629 311 aa13.24□□□□□ -0.29
NPHP4-210ENST00000506941 CNN1P51911 297 aaKnown RBP13.24□□□□□ -0.29
NPHP4-210ENST00000506941 FXYD7P58549 80 aa13.24□□□□□ -0.29
NPHP4-210ENST00000506941 AMTNQ6UX39 209 aa13.24□□□□□ -0.29
NPHP4-210ENST00000506941 KCNRGQ8N5I3 272 aa13.24□□□□□ -0.29
NPHP4-210ENST00000506941 BLNKQ8WV28 456 aa13.24□□□□□ -0.29
NPHP4-210ENST00000506941 RPUSD4Q96CM3 377 aaKnown RBP13.24□□□□□ -0.29
NPHP4-210ENST00000506941 PAXXQ9BUH6 204 aa13.24□□□□□ -0.29
NPHP4-210ENST00000506941 SLC35B3Q9H1N7 401 aa13.24□□□□□ -0.29
NPHP4-210ENST00000506941 OR51M1Q9H341 326 aa13.24□□□□□ -0.29
NPHP4-210ENST00000506941 XCL2Q9UBD3 114 aa13.24□□□□□ -0.29
NPHP4-210ENST00000506941 PRAC2D3DTV9 90 aa13.23□□□□□ -0.29
NPHP4-210ENST00000506941 TAAR5O14804 337 aa13.23□□□□□ -0.29
NPHP4-210ENST00000506941 OR7C2O60412 319 aa13.23□□□□□ -0.29
NPHP4-210ENST00000506941 PDE6HQ13956 83 aa13.23□□□□□ -0.29
NPHP4-210ENST00000506941 TMEM41BQ5BJD5 291 aa13.23□□□□□ -0.29
NPHP4-210ENST00000506941 FAM122CQ6P4D5 195 aa13.23□□□□□ -0.29
NPHP4-210ENST00000506941 OR8A1Q8NGG7 326 aa13.23□□□□□ -0.29
NPHP4-210ENST00000506941 OR10G4Q8NGN3 311 aa13.23□□□□□ -0.29
NPHP4-210ENST00000506941 OR10G9Q8NGN4 311 aa13.23□□□□□ -0.29
NPHP4-210ENST00000506941 OR10G7Q8NGN6 311 aa13.23□□□□□ -0.29
NPHP4-210ENST00000506941 NBEAP1P0C6P0 100 aa13.22□□□□□ -0.29
NPHP4-210ENST00000506941 NUTF2P61970 127 aaKnown RBP13.22□□□□□ -0.29
NPHP4-210ENST00000506941 SERF2P84101 59 aa13.22□□□□□ -0.29
NPHP4-210ENST00000506941 PSG9Q00887 426 aa13.22□□□□□ -0.29
NPHP4-210ENST00000506941 KHDC3LQ587J8 217 aa13.22□□□□□ -0.29
NPHP4-210ENST00000506941 TCTE3Q8IZS6 198 aa13.22□□□□□ -0.29
NPHP4-210ENST00000506941 RPP25LQ8N5L8 163 aaKnown RBP13.22□□□□□ -0.29
NPHP4-210ENST00000506941 OR11H2Q8NH07 326 aa13.22□□□□□ -0.29
NPHP4-210ENST00000506941 RNF141Q8WVD5 230 aa13.22□□□□□ -0.29
NPHP4-210ENST00000506941 STARD9Q9P2P6 4700 aa13.21□□□□□ -0.29
NPHP4-210ENST00000506941 A0A1B0GVG6 124 aa13.21□□□□□ -0.29
NPHP4-210ENST00000506941 JTBO76095 146 aa13.21□□□□□ -0.29
NPHP4-210ENST00000506941 DUSP14O95147 198 aaKnown RBP13.21□□□□□ -0.29
NPHP4-210ENST00000506941 HIST1H1AQ02539 215 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms