RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 GATAD1Q8WUU5 269 aa5.36□□□□□ -1.55
GYPB-206ENST00000506516 TMEM37Q8WXS4 190 aa5.36□□□□□ -1.55
GYPB-206ENST00000506516 UHRF2Q96PU4 802 aa5.36□□□□□ -1.55
GYPB-206ENST00000506516 ATP5SQ99766 215 aa5.36□□□□□ -1.55
GYPB-206ENST00000506516 SCRT1Q9BWW7 348 aa5.36□□□□□ -1.55
GYPB-206ENST00000506516 NPCDR1Q9BY65 106 aa5.36□□□□□ -1.55
GYPB-206ENST00000506516 SLC25A32Q9H2D1 315 aa5.36□□□□□ -1.55
GYPB-206ENST00000506516 RPRMQ9NS64 109 aa5.36□□□□□ -1.55
GYPB-206ENST00000506516 TP53TG1Q9Y2A0 90 aa5.36□□□□□ -1.55
GYPB-206ENST00000506516 PXMP4Q9Y6I8 212 aa5.36□□□□□ -1.55
GYPB-206ENST00000506516 HUWE1Q7Z6Z7 4374 aaKnown RBP5.35□□□□□ -1.55
GYPB-206ENST00000506516 COL7A1Q02388 2944 aa5.35□□□□□ -1.55
GYPB-206ENST00000506516 KNCNA6PVL3 124 aa5.35□□□□□ -1.55
GYPB-206ENST00000506516 SPRY2O43597 315 aa5.35□□□□□ -1.55
GYPB-206ENST00000506516 SPP1P10451 314 aa5.35□□□□□ -1.55
GYPB-206ENST00000506516 LINC00310P59036 64 aa5.35□□□□□ -1.55
GYPB-206ENST00000506516 SPATA31B1PQ5VZV4 182 aa5.35□□□□□ -1.55
GYPB-206ENST00000506516 EBLN2Q6P2I7 272 aa5.35□□□□□ -1.55
GYPB-206ENST00000506516 INO80EQ8NBZ0 244 aaPredicted RBP5.35□□□□□ -1.55
GYPB-206ENST00000506516 WDR61Q9GZS3 305 aaKnown RBP5.35□□□□□ -1.55
GYPB-206ENST00000506516 A0A087X0K7 114 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 NPIPB6E9PJ23 425 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 H3BMM0 161 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 SOCS3O14543 225 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 CA1P00915 261 aaPredicted RBP5.34□□□□□ -1.55
GYPB-206ENST00000506516 CXCL2P19875 107 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 ZNF266Q14584 549 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 GUK1Q16774 197 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 DEFB135Q30KP9 77 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 TOR2AQ5JU69 321 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 TRPT1Q86TN4 253 aaKnown RBP5.34□□□□□ -1.55
GYPB-206ENST00000506516 OR2T35Q8NGX2 323 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 RNF183Q96D59 192 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 OVOL2Q9BRP0 275 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 C1QTNF4Q9BXJ3 329 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 PARD6GQ9BYG4 376 aaPredicted RBP5.34□□□□□ -1.55
GYPB-206ENST00000506516 SMIM3Q9BZL3 60 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 RETNQ9HD89 108 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 CLEC5AQ9NY25 188 aa5.34□□□□□ -1.55
GYPB-206ENST00000506516 TRAV5A0A0B4J249 113 aa5.33□□□□□ -1.56
GYPB-206ENST00000506516 DUSP14O95147 198 aaKnown RBP5.33□□□□□ -1.56
GYPB-206ENST00000506516 HLA-DRB4P13762 266 aa5.33□□□□□ -1.56
GYPB-206ENST00000506516 FAM78BQ5VT40 261 aa5.33□□□□□ -1.56
GYPB-206ENST00000506516 LCN15Q6UWW0 184 aa5.33□□□□□ -1.56
GYPB-206ENST00000506516 FOXI2Q6ZQN5 318 aa5.33□□□□□ -1.56
GYPB-206ENST00000506516 OR4B1Q8NGF8 309 aa5.33□□□□□ -1.56
GYPB-206ENST00000506516 AQP10Q96PS8 301 aa5.33□□□□□ -1.56
GYPB-206ENST00000506516 RARRES2Q99969 163 aa5.33□□□□□ -1.56
GYPB-206ENST00000506516 SLC50A1Q9BRV3 221 aa5.33□□□□□ -1.56
GYPB-206ENST00000506516 HRH4Q9H3N8 390 aa5.33□□□□□ -1.56
GYPB-206ENST00000506516 SAV1Q9H4B6 383 aaPredicted RBP5.33□□□□□ -1.56
GYPB-206ENST00000506516 HLA-DRB4X5D2U9 266 aa5.33□□□□□ -1.56
GYPB-206ENST00000506516 FXYD6-FXYD2A0A087WZ82 144 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 TRAV8-2A0A0B4J237 113 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 C3orf84H3BNL1 204 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 MRPS12O15235 138 aaKnown RBP5.32□□□□□ -1.56
GYPB-206ENST00000506516 IGKV3-20P01619 116 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 PSG9Q00887 426 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 Q5BKY6 102 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 FFAR4Q5NUL3 377 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 MORN5Q5VZ52 161 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 IGFL4Q6B9Z1 124 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 ZNF738Q8NE65 137 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 NUDT10Q8NFP7 164 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 OR11H2Q8NH07 326 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 IL17DQ8TAD2 202 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 NUDT11Q96G61 164 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 C17orf77Q96MU5 243 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 MRPL32Q9BYC8 188 aaKnown RBP5.32□□□□□ -1.56
GYPB-206ENST00000506516 EDA2RQ9HAV5 297 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 WFDC1Q9HC57 220 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 TMEM14CQ9P0S9 112 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 FUT9Q9Y231 359 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 TIMM9Q9Y5J7 89 aa5.32□□□□□ -1.56
GYPB-206ENST00000506516 BORCS7-ASMTA0A0B4J1R7 106 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 A0A0J9YX75 114 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 A0A1W2PPV4 95 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 TAAR5O14804 337 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 ZNF253O75346 499 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 SNRPCP09234 159 aaKnown RBP5.31□□□□□ -1.56
GYPB-206ENST00000506516 IGLC2P0DOY2 106 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 HIST1H1EP10412 219 aaKnown RBP5.31□□□□□ -1.56
GYPB-206ENST00000506516 TAS2R45P59539 299 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 RHOBP62745 196 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 PSG3Q16557 428 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 ACOT6Q3I5F7 207 aaPredicted RBP5.31□□□□□ -1.56
GYPB-206ENST00000506516 GCSAMLQ5JQS6 135 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 GDF5OSQ5U4N7 250 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 RNF182Q8N6D2 247 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 MUC7Q8TAX7 377 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 C20orf173Q96LM9 149 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 OR51M1Q9H341 326 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 ZNF331Q9NQX6 463 aaPredicted RBP5.31□□□□□ -1.56
GYPB-206ENST00000506516 PPP1R14DQ9NXH3 145 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 TNFSF18Q9UNG2 199 aa5.31□□□□□ -1.56
GYPB-206ENST00000506516 TRBV19A0A075B6N1 114 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 F6UB75 175 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 H3BQ15 152 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 MBP02144 154 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms