RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 OR1L4Q8NGR5 311 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 XCL2Q9UBD3 114 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 TENM2Q9NT68 2774 aa12.95□□□□□ -0.34
SMN1-204ENST00000506163 SLC17A3O00476 420 aa12.95□□□□□ -0.34
SMN1-204ENST00000506163 SPATA31B1PQ5VZV4 182 aa12.95□□□□□ -0.34
SMN1-204ENST00000506163 BPIFA4PQ86YQ2 179 aa12.95□□□□□ -0.34
SMN1-204ENST00000506163 CLUHP3Q96NS8 147 aa12.95□□□□□ -0.34
SMN1-204ENST00000506163 SLC35B3Q9H1N7 401 aa12.95□□□□□ -0.34
SMN1-204ENST00000506163 RPRMQ9NS64 109 aa12.95□□□□□ -0.34
SMN1-204ENST00000506163 A8MTW9 85 aa12.94□□□□□ -0.34
SMN1-204ENST00000506163 DEFB4AO15263 64 aa12.94□□□□□ -0.34
SMN1-204ENST00000506163 OR4B1Q8NGF8 309 aa12.94□□□□□ -0.34
SMN1-204ENST00000506163 IL17DQ8TAD2 202 aa12.94□□□□□ -0.34
SMN1-204ENST00000506163 SAT2Q96F10 170 aaPredicted RBP12.94□□□□□ -0.34
SMN1-204ENST00000506163 PFDN5Q99471 154 aa12.94□□□□□ -0.34
SMN1-204ENST00000506163 ZNF331Q9NQX6 463 aaPredicted RBP12.94□□□□□ -0.34
SMN1-204ENST00000506163 X6R8D5 127 aa12.94□□□□□ -0.34
SMN1-204ENST00000506163 ZNF705EA8MWA4 302 aaPredicted RBP12.93□□□□□ -0.34
SMN1-204ENST00000506163 GIPP09681 153 aaPredicted RBP12.93□□□□□ -0.34
SMN1-204ENST00000506163 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
SMN1-204ENST00000506163 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
SMN1-204ENST00000506163 AMTNQ6UX39 209 aa12.93□□□□□ -0.34
SMN1-204ENST00000506163 Q8NAQ8 132 aa12.93□□□□□ -0.34
SMN1-204ENST00000506163 HRH4Q9H3N8 390 aa12.93□□□□□ -0.34
SMN1-204ENST00000506163 ZNF586Q9NXT0 402 aa12.93□□□□□ -0.34
SMN1-204ENST00000506163 LYSTQ99698 3801 aa12.92□□□□□ -0.34
SMN1-204ENST00000506163 ZNF705FA8MVS1 300 aaPredicted RBP12.92□□□□□ -0.34
SMN1-204ENST00000506163 G3V3Q6 166 aa12.92□□□□□ -0.34
SMN1-204ENST00000506163 PSG3Q16557 428 aa12.92□□□□□ -0.34
SMN1-204ENST00000506163 FAM167A-AS1Q96KT0 104 aa12.92□□□□□ -0.34
SMN1-204ENST00000506163 RNF24Q9Y225 148 aa12.92□□□□□ -0.34
SMN1-204ENST00000506163 DYNC2H1Q8NCM8 4307 aaKnown RBP12.91□□□□□ -0.34
SMN1-204ENST00000506163 RBMY1A1P0DJD3 496 aaKnown RBP12.91□□□□□ -0.34
SMN1-204ENST00000506163 RBMY1CP0DJD4 496 aa12.91□□□□□ -0.34
SMN1-204ENST00000506163 CNN1P51911 297 aaKnown RBP12.91□□□□□ -0.34
SMN1-204ENST00000506163 NUTF2P61970 127 aaKnown RBP12.91□□□□□ -0.34
SMN1-204ENST00000506163 PSG9Q00887 426 aa12.91□□□□□ -0.34
SMN1-204ENST00000506163 RBMY1FQ15415 496 aaKnown RBP12.91□□□□□ -0.34
SMN1-204ENST00000506163 MIR17HGQ75NE6 70 aa12.91□□□□□ -0.34
SMN1-204ENST00000506163 ZNF738Q8NE65 137 aa12.91□□□□□ -0.34
SMN1-204ENST00000506163 SLC25A2Q9BXI2 301 aa12.91□□□□□ -0.34
SMN1-204ENST00000506163 PRAC2D3DTV9 90 aa12.9□□□□□ -0.34
SMN1-204ENST00000506163 PYYP10082 97 aa12.9□□□□□ -0.34
SMN1-204ENST00000506163 CXCL2P19875 107 aa12.9□□□□□ -0.34
SMN1-204ENST00000506163 LCN15Q6UWW0 184 aa12.9□□□□□ -0.34
SMN1-204ENST00000506163 LRRC20Q8TCA0 184 aa12.9□□□□□ -0.34
SMN1-204ENST00000506163 AQP10Q96PS8 301 aa12.9□□□□□ -0.34
SMN1-204ENST00000506163 TMEM14CQ9P0S9 112 aa12.9□□□□□ -0.34
SMN1-204ENST00000506163 IGHV4-28A0A0C4DH34 117 aa12.89□□□□□ -0.35
SMN1-204ENST00000506163 NDUFB4O95168 129 aa12.89□□□□□ -0.35
SMN1-204ENST00000506163 ZNF705AQ6ZN79 300 aaPredicted RBP12.89□□□□□ -0.35
SMN1-204ENST00000506163 OR8A1Q8NGG7 326 aa12.89□□□□□ -0.35
SMN1-204ENST00000506163 PARD6GQ9BYG4 376 aaPredicted RBP12.89□□□□□ -0.35
SMN1-204ENST00000506163 MFFQ9GZY8 342 aa12.89□□□□□ -0.35
SMN1-204ENST00000506163 C11orf68Q9H3H3 251 aaKnown RBP12.89□□□□□ -0.35
SMN1-204ENST00000506163 IFNA5P01569 189 aa12.88□□□□□ -0.35
SMN1-204ENST00000506163 PLECQ15149 4684 aaKnown RBP12.88□□□□□ -0.35
SMN1-204ENST00000506163 C1orf158Q8N1D5 194 aa12.88□□□□□ -0.35
SMN1-204ENST00000506163 SCGB1C1Q8TD33 95 aa12.88□□□□□ -0.35
SMN1-204ENST00000506163 ASB13Q8WXK3 278 aa12.88□□□□□ -0.35
SMN1-204ENST00000506163 RPUSD4Q96CM3 377 aaKnown RBP12.88□□□□□ -0.35
SMN1-204ENST00000506163 SLC50A1Q9BRV3 221 aa12.88□□□□□ -0.35
SMN1-204ENST00000506163 C1QTNF4Q9BXJ3 329 aa12.88□□□□□ -0.35
SMN1-204ENST00000506163 TRBV19A0A075B6N1 114 aa12.88□□□□□ -0.35
SMN1-204ENST00000506163 C17orf112F2Z3M2 114 aa12.88□□□□□ -0.35
SMN1-204ENST00000506163 EIF3GO75821 320 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMN1-204ENST00000506163 FFAR4Q5NUL3 377 aa12.88□□□□□ -0.35
SMN1-204ENST00000506163 OR2T35Q8NGX2 323 aa12.88□□□□□ -0.35
SMN1-204ENST00000506163 ZNF503Q96F45 646 aa12.88□□□□□ -0.35
SMN1-204ENST00000506163 RYR3Q15413 4870 aa12.87□□□□□ -0.35
SMN1-204ENST00000506163 RNF222A6NCQ9 220 aa12.87□□□□□ -0.35
SMN1-204ENST00000506163 CRXO43186 299 aaPredicted RBP12.87□□□□□ -0.35
SMN1-204ENST00000506163 HIST1H1EP10412 219 aaKnown RBP12.87□□□□□ -0.35
SMN1-204ENST00000506163 HIST1H1AQ02539 215 aaPredicted RBP12.87□□□□□ -0.35
SMN1-204ENST00000506163 KCNIP2Q9NS61 270 aa12.87□□□□□ -0.35
SMN1-204ENST00000506163 FUT9Q9Y231 359 aa12.87□□□□□ -0.35
SMN1-204ENST00000506163 SMLR1H3BR10 107 aa12.86□□□□□ -0.35
SMN1-204ENST00000506163 M0R2Z0 102 aa12.86□□□□□ -0.35
SMN1-204ENST00000506163 DUSP14O95147 198 aaKnown RBP12.86□□□□□ -0.35
SMN1-204ENST00000506163 MIFP14174 115 aa12.86□□□□□ -0.35
SMN1-204ENST00000506163 NANOS2P60321 138 aaKnown RBP12.86□□□□□ -0.35
SMN1-204ENST00000506163 PMS2P11Q13670 270 aa12.86□□□□□ -0.35
SMN1-204ENST00000506163 GUK1Q16774 197 aa12.86□□□□□ -0.35
SMN1-204ENST00000506163 TNFSF18Q9UNG2 199 aa12.86□□□□□ -0.35
SMN1-204ENST00000506163 FXYD6-FXYD2A0A087WZ82 144 aa12.85□□□□□ -0.35
SMN1-204ENST00000506163 SPINK13Q1W4C9 94 aa12.85□□□□□ -0.35
SMN1-204ENST00000506163 BLNKQ8WV28 456 aa12.85□□□□□ -0.35
SMN1-204ENST00000506163 FXYD5Q96DB9 178 aa12.85□□□□□ -0.35
SMN1-204ENST00000506163 MRPL32Q9BYC8 188 aaKnown RBP12.85□□□□□ -0.35
SMN1-204ENST00000506163 SACSQ9NZJ4 4579 aa12.85□□□□□ -0.35
SMN1-204ENST00000506163 IGHV3OR16-12A0A075B7B8 117 aa12.84□□□□□ -0.35
SMN1-204ENST00000506163 M0R3E3 92 aa12.84□□□□□ -0.35
SMN1-204ENST00000506163 ZNF253O75346 499 aa12.84□□□□□ -0.35
SMN1-204ENST00000506163 PRM2P04554 102 aa12.84□□□□□ -0.35
SMN1-204ENST00000506163 OR10J4P0C629 311 aa12.84□□□□□ -0.35
SMN1-204ENST00000506163 EXOC3-AS1Q8N2X6 119 aa12.84□□□□□ -0.35
SMN1-204ENST00000506163 OR51M1Q9H341 326 aa12.84□□□□□ -0.35
SMN1-204ENST00000506163 TRAV12-2A0A075B6T6 113 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 CXorf65A6NEN9 183 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 KIR3DS1Q14943 382 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms