RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 C2orf70A6NJV1 201 aa8.6□□□□□ -1.03
SGCA-205ENST00000505964 CHEK1O14757 476 aa8.6□□□□□ -1.03
SGCA-205ENST00000505964 OR10J4P0C629 311 aa8.6□□□□□ -1.03
SGCA-205ENST00000505964 NBEAP1P0C6P0 100 aa8.6□□□□□ -1.03
SGCA-205ENST00000505964 GALR1P47211 349 aa8.6□□□□□ -1.03
SGCA-205ENST00000505964 PDE6HQ13956 83 aa8.6□□□□□ -1.03
SGCA-205ENST00000505964 PEA15Q15121 130 aa8.6□□□□□ -1.03
SGCA-205ENST00000505964 NSUN5P1Q3KNT7 163 aa8.6□□□□□ -1.03
SGCA-205ENST00000505964 KPRPQ5T749 579 aaPredicted RBP8.6□□□□□ -1.03
SGCA-205ENST00000505964 OR9G4Q8NGQ1 327 aa8.6□□□□□ -1.03
SGCA-205ENST00000505964 DLX4Q92988 240 aaPredicted RBP8.6□□□□□ -1.03
SGCA-205ENST00000505964 DUX3Q96PT4 197 aa8.6□□□□□ -1.03
SGCA-205ENST00000505964 RHPN1-AS1Q9BWJ2 59 aa8.6□□□□□ -1.03
SGCA-205ENST00000505964 NKX6-2Q9C056 277 aaPredicted RBP8.6□□□□□ -1.03
SGCA-205ENST00000505964 HELTA6NFD8 242 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 FAM74A7A6NL05 159 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 PAGE4O60829 102 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 ZNF253O75346 499 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 ATP6V1G1O75348 118 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 CD5P06127 495 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 ATF4P18848 351 aaPredicted RBP8.59□□□□□ -1.03
SGCA-205ENST00000505964 CBLN1P23435 193 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 HAGHQ16775 308 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 TOR2AQ5JU69 321 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 LYPD1Q8N2G4 141 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 EIF5A2Q9GZV4 153 aaKnown RBP8.59□□□□□ -1.03
SGCA-205ENST00000505964 ZNF586Q9NXT0 402 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 SIGLEC8Q9NYZ4 499 aa8.59□□□□□ -1.03
SGCA-205ENST00000505964 TRBV19A0A075B6N1 114 aa8.58□□□□□ -1.04
SGCA-205ENST00000505964 IGHV3-49A0A0A0MS15 119 aa8.58□□□□□ -1.04
SGCA-205ENST00000505964 H3BQ15 152 aa8.58□□□□□ -1.04
SGCA-205ENST00000505964 OVOL1O14753 267 aa8.58□□□□□ -1.04
SGCA-205ENST00000505964 FOLR2P14207 255 aa8.58□□□□□ -1.04
SGCA-205ENST00000505964 MEF2BQ02080 365 aaPredicted RBP8.58□□□□□ -1.04
SGCA-205ENST00000505964 ICAM4Q14773 271 aa8.58□□□□□ -1.04
SGCA-205ENST00000505964 OXLD1Q5BKU9 147 aa8.58□□□□□ -1.04
SGCA-205ENST00000505964 SIGLEC15Q6ZMC9 328 aa8.58□□□□□ -1.04
SGCA-205ENST00000505964 SLC7A5P1Q8MH63 180 aa8.58□□□□□ -1.04
SGCA-205ENST00000505964 TCEAL7Q9BRU2 100 aa8.58□□□□□ -1.04
SGCA-205ENST00000505964 AURKAIP1Q9NWT8 199 aaPredicted RBP8.58□□□□□ -1.04
SGCA-205ENST00000505964 SMAD5-AS1Q9Y6J3 95 aa8.58□□□□□ -1.04
SGCA-205ENST00000505964 IGHV3OR16-13A0A075B7E8 117 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 IGHV3-74A0A0B4J1X5 117 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 IGHV3-66A0A0C4DH42 116 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 ZNF785A8K8V0 405 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 CSN3P07498 182 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 UBE2G2P60604 165 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 PSG9Q00887 426 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 SAMD13Q5VXD3 122 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 CST9LP1Q5W188 147 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 FAM90A2PQ658T7 463 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 RARRES2Q99969 163 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 SLC50A1Q9BRV3 221 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 OTORQ9NRC9 128 aa8.57□□□□□ -1.04
SGCA-205ENST00000505964 YTHDF2Q9Y5A9 579 aaKnown RBP8.57□□□□□ -1.04
SGCA-205ENST00000505964 C11orf94C9JXX5 98 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 F6UZH7 168 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 PDE6DO43924 150 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 NDUFB4O95168 129 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 CD81P60033 236 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 SRSF3P84103 164 aaKnown RBP8.56□□□□□ -1.04
SGCA-205ENST00000505964 ADAMTSL5Q6ZMM2 481 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 CCDC28AQ8IWP9 274 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 ARL6IP6Q8N6S5 226 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 RXFP4Q8TDU9 374 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 BLNKQ8WV28 456 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 C17orf77Q96MU5 243 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 CLEC5AQ9NY25 188 aa8.56□□□□□ -1.04
SGCA-205ENST00000505964 GGTLC3B5MD39 225 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 TMEM250H0YL14 139 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 PF4P02776 101 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 SRP19P09132 144 aaKnown RBP8.55□□□□□ -1.04
SGCA-205ENST00000505964 EDN2P20800 178 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 ATP5G3P48201 142 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 RANP62826 216 aaKnown RBP8.55□□□□□ -1.04
SGCA-205ENST00000505964 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 TCF24Q7RTU0 167 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 LINC00482Q8N8I6 264 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 CITED4Q96RK1 184 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 Q9H3A6 140 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 AAMDCQ9H7C9 122 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 TREM1Q9NP99 234 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 NRN1Q9NPD7 142 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 ZNF331Q9NQX6 463 aaPredicted RBP8.55□□□□□ -1.04
SGCA-205ENST00000505964 MLXQ9UH92 298 aa8.55□□□□□ -1.04
SGCA-205ENST00000505964 TRAV25A0A0B4J276 109 aa8.54□□□□□ -1.04
SGCA-205ENST00000505964 PGPA6NDG6 321 aa8.54□□□□□ -1.04
SGCA-205ENST00000505964 SLC17A3O00476 420 aa8.54□□□□□ -1.04
SGCA-205ENST00000505964 SUMO1P63165 101 aaKnown RBP8.54□□□□□ -1.04
SGCA-205ENST00000505964 C5orf17Q8NAS9 161 aa8.54□□□□□ -1.04
SGCA-205ENST00000505964 C11orf52Q96A22 123 aa8.54□□□□□ -1.04
SGCA-205ENST00000505964 SLC35B3Q9H1N7 401 aa8.54□□□□□ -1.04
SGCA-205ENST00000505964 PRELID1Q9Y255 219 aa8.54□□□□□ -1.04
SGCA-205ENST00000505964 DYNC2H1Q8NCM8 4307 aaKnown RBP8.54□□□□□ -1.04
SGCA-205ENST00000505964 TRAV2A0A0B4J234 112 aa8.53□□□□□ -1.04
SGCA-205ENST00000505964 TMEM218A2RU14 115 aa8.53□□□□□ -1.04
SGCA-205ENST00000505964 C9JQL5 133 aa8.53□□□□□ -1.04
SGCA-205ENST00000505964 H3BTX0 84 aa8.53□□□□□ -1.04
SGCA-205ENST00000505964 SOCS3O14543 225 aa8.53□□□□□ -1.04
SGCA-205ENST00000505964 SNRPCP09234 159 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms