RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 MIR17HGQ75NE6 70 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 KIR2DL5AQ8N109 375 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 HSD17B11Q8NBQ5 300 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 KIR2DL5BQ8NHK3 375 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 ST6GAL2Q96JF0 529 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 TIMM9Q9Y5J7 89 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 H3BQ15 152 aa12.36□□□□□ -0.43
SYNE4-207ENST00000505054 H3BTX0 84 aa12.36□□□□□ -0.43
SYNE4-207ENST00000505054 GDF5OSQ5U4N7 250 aa12.36□□□□□ -0.43
SYNE4-207ENST00000505054 RPL7L1Q6DKI1 246 aaKnown RBP12.36□□□□□ -0.43
SYNE4-207ENST00000505054 STHQ8IWL8 128 aa12.36□□□□□ -0.43
SYNE4-207ENST00000505054 RNF182Q8N6D2 247 aa12.36□□□□□ -0.43
SYNE4-207ENST00000505054 FAM167A-AS1Q96KT0 104 aa12.36□□□□□ -0.43
SYNE4-207ENST00000505054 SLC25A2Q9BXI2 301 aa12.36□□□□□ -0.43
SYNE4-207ENST00000505054 MFFQ9GZY8 342 aa12.36□□□□□ -0.43
SYNE4-207ENST00000505054 hCG_2014768A0A024R1R8 64 aa12.35□□□□□ -0.43
SYNE4-207ENST00000505054 SLC17A3O00476 420 aa12.35□□□□□ -0.43
SYNE4-207ENST00000505054 HLA-DRB4P13762 266 aa12.35□□□□□ -0.43
SYNE4-207ENST00000505054 ATP6V0CP27449 155 aa12.35□□□□□ -0.43
SYNE4-207ENST00000505054 MRPL32Q9BYC8 188 aaKnown RBP12.35□□□□□ -0.43
SYNE4-207ENST00000505054 HRH4Q9H3N8 390 aa12.35□□□□□ -0.43
SYNE4-207ENST00000505054 TMEM14CQ9P0S9 112 aa12.35□□□□□ -0.43
SYNE4-207ENST00000505054 FUT9Q9Y231 359 aa12.35□□□□□ -0.43
SYNE4-207ENST00000505054 HLA-DRB4X5D2U9 266 aa12.35□□□□□ -0.43
SYNE4-207ENST00000505054 F6UB75 175 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 H3BMM0 161 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 UBE2CO00762 179 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 PYYP10082 97 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 CXCL2P19875 107 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 HLA-DMBP28068 263 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 LCN15Q6UWW0 184 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 FOXI2Q6ZQN5 318 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 OR2G3Q8NGZ4 309 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 CSTL1Q9H114 145 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 SH3BGRL3Q9H299 93 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 SAV1Q9H4B6 383 aaPredicted RBP12.34□□□□□ -0.43
SYNE4-207ENST00000505054 ZNF331Q9NQX6 463 aaPredicted RBP12.34□□□□□ -0.43
SYNE4-207ENST00000505054 CYTL1Q9NRR1 136 aa12.34□□□□□ -0.43
SYNE4-207ENST00000505054 PLECQ15149 4684 aaKnown RBP12.34□□□□□ -0.43
SYNE4-207ENST00000505054 HMSDA8MTL9 139 aa12.33□□□□□ -0.44
SYNE4-207ENST00000505054 GIG44P09565 113 aaPredicted RBP12.33□□□□□ -0.44
SYNE4-207ENST00000505054 RAB2AP61019 212 aa12.33□□□□□ -0.44
SYNE4-207ENST00000505054 ZNF345Q14585 488 aa12.33□□□□□ -0.44
SYNE4-207ENST00000505054 DEFB135Q30KP9 77 aa12.33□□□□□ -0.44
SYNE4-207ENST00000505054 Q6ZWC4 215 aa12.33□□□□□ -0.44
SYNE4-207ENST00000505054 KCNRGQ8N5I3 272 aa12.33□□□□□ -0.44
SYNE4-207ENST00000505054 SAT2Q96F10 170 aaPredicted RBP12.33□□□□□ -0.44
SYNE4-207ENST00000505054 OVOL2Q9BRP0 275 aa12.33□□□□□ -0.44
SYNE4-207ENST00000505054 PSMG3Q9BT73 122 aaPredicted RBP12.33□□□□□ -0.44
SYNE4-207ENST00000505054 RPRMQ9NS64 109 aa12.33□□□□□ -0.44
SYNE4-207ENST00000505054 ZNF586Q9NXT0 402 aa12.33□□□□□ -0.44
SYNE4-207ENST00000505054 BORCS7-ASMTA0A0B4J1R7 106 aa12.32□□□□□ -0.44
SYNE4-207ENST00000505054 A0A0J9YX75 114 aa12.32□□□□□ -0.44
SYNE4-207ENST00000505054 M6PRP20645 277 aa12.32□□□□□ -0.44
SYNE4-207ENST00000505054 C4BPBP20851 252 aa12.32□□□□□ -0.44
SYNE4-207ENST00000505054 TCTE3Q8IZS6 198 aa12.32□□□□□ -0.44
SYNE4-207ENST00000505054 LRRC20Q8TCA0 184 aa12.32□□□□□ -0.44
SYNE4-207ENST00000505054 SLC50A1Q9BRV3 221 aa12.32□□□□□ -0.44
SYNE4-207ENST00000505054 TRBV19A0A075B6N1 114 aa12.31□□□□□ -0.44
SYNE4-207ENST00000505054 A0A1B0GVG6 124 aa12.31□□□□□ -0.44
SYNE4-207ENST00000505054 TAAR5O14804 337 aa12.31□□□□□ -0.44
SYNE4-207ENST00000505054 EIF3GO75821 320 aaKnown RBP eCLIP12.31□□□□□ -0.44
SYNE4-207ENST00000505054 CA1P00915 261 aaPredicted RBP12.31□□□□□ -0.44
SYNE4-207ENST00000505054 HIST1H1EP10412 219 aaKnown RBP12.31□□□□□ -0.44
SYNE4-207ENST00000505054 SPP1P10451 314 aa12.31□□□□□ -0.44
SYNE4-207ENST00000505054 RHOBP62745 196 aa12.31□□□□□ -0.44
SYNE4-207ENST00000505054 PSG3Q16557 428 aa12.31□□□□□ -0.44
SYNE4-207ENST00000505054 GUK1Q16774 197 aa12.31□□□□□ -0.44
SYNE4-207ENST00000505054 ACOT6Q3I5F7 207 aaPredicted RBP12.31□□□□□ -0.44
SYNE4-207ENST00000505054 ZNF738Q8NE65 137 aa12.31□□□□□ -0.44
SYNE4-207ENST00000505054 ZNF503Q96F45 646 aa12.31□□□□□ -0.44
SYNE4-207ENST00000505054 AGRNO00468 2067 aa12.31□□□□□ -0.44
SYNE4-207ENST00000505054 ZNF253O75346 499 aa12.3□□□□□ -0.44
SYNE4-207ENST00000505054 NDUFB4O95168 129 aa12.3□□□□□ -0.44
SYNE4-207ENST00000505054 IGKV3-20P01619 116 aa12.3□□□□□ -0.44
SYNE4-207ENST00000505054 PRB4P10163 310 aaPredicted RBP12.3□□□□□ -0.44
SYNE4-207ENST00000505054 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
SYNE4-207ENST00000505054 RNF183Q96D59 192 aa12.3□□□□□ -0.44
SYNE4-207ENST00000505054 FXYD5Q96DB9 178 aa12.3□□□□□ -0.44
SYNE4-207ENST00000505054 OR51M1Q9H341 326 aa12.3□□□□□ -0.44
SYNE4-207ENST00000505054 TP53TG1Q9Y2A0 90 aa12.3□□□□□ -0.44
SYNE4-207ENST00000505054 A8MTW9 85 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 SPRY2O43597 315 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 OR10J4P0C629 311 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 SERF2P84101 59 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 EBLN2Q6P2I7 272 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 FAM122CQ6P4D5 195 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 RPP25LQ8N5L8 163 aaKnown RBP12.29□□□□□ -0.44
SYNE4-207ENST00000505054 OR10G4Q8NGN3 311 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 OR10G9Q8NGN4 311 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 OR10G7Q8NGN6 311 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 GNPNAT1Q96EK6 184 aaPredicted RBP12.29□□□□□ -0.44
SYNE4-207ENST00000505054 CLUHP3Q96NS8 147 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 ARPC5LQ9BPX5 153 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 PAXXQ9BUH6 204 aa12.29□□□□□ -0.44
SYNE4-207ENST00000505054 OR7C2O60412 319 aa12.28□□□□□ -0.44
SYNE4-207ENST00000505054 ZNF705DP0CH99 300 aaPredicted RBP12.28□□□□□ -0.44
SYNE4-207ENST00000505054 ZNF705BP0CI00 300 aaPredicted RBP12.28□□□□□ -0.44
SYNE4-207ENST00000505054 CD300CQ08708 224 aa12.28□□□□□ -0.44
SYNE4-207ENST00000505054 PDE6HQ13956 83 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms