RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 PI4KAP42356 2102 aa12.25□□□□□ -0.45
C4A-259ENST00000498271 VDAC2P45880 294 aaPredicted RBP12.25□□□□□ -0.45
C4A-259ENST00000498271 ZNF726P1Q15940 193 aa12.25□□□□□ -0.45
C4A-259ENST00000498271 MPDZO75970 2070 aa12.25□□□□□ -0.45
C4A-259ENST00000498271 PLXNB3Q9ULL4 1909 aa12.25□□□□□ -0.45
C4A-259ENST00000498271 LY6G6EA0A0G2JKS1 128 aa12.24□□□□□ -0.45
C4A-259ENST00000498271 H3BMM0 161 aa12.24□□□□□ -0.45
C4A-259ENST00000498271 C11orf52Q96A22 123 aa12.24□□□□□ -0.45
C4A-259ENST00000498271 UBE2WQ96B02 151 aa12.24□□□□□ -0.45
C4A-259ENST00000498271 U3KQA8 63 aa12.24□□□□□ -0.45
C4A-259ENST00000498271 IGLC7A0M8Q6 106 aa12.24□□□□□ -0.45
C4A-259ENST00000498271 LINC00473A8K010 186 aa12.24□□□□□ -0.45
C4A-259ENST00000498271 IGKV2-40A0A087WW87 121 aaPredicted RBP12.24□□□□□ -0.45
C4A-259ENST00000498271 IGKV2D-40P01614 121 aaPredicted RBP12.24□□□□□ -0.45
C4A-259ENST00000498271 IFITM1P13164 125 aa12.24□□□□□ -0.45
C4A-259ENST00000498271 IL15RAQ13261 267 aa12.24□□□□□ -0.45
C4A-259ENST00000498271 TMEM75Q8N9X5 138 aa12.24□□□□□ -0.45
C4A-259ENST00000498271 INAFM2P0DMQ5 153 aa12.24□□□□□ -0.45
C4A-259ENST00000498271 TRAV3A0A0B4J244 114 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 CRPP02741 224 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 AMN1Q8IY45 258 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 C1orf147Q96MC9 270 aaPredicted RBP12.23□□□□□ -0.45
C4A-259ENST00000498271 SELENOKQ9Y6D0 94 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 RNASE2P10153 161 aaKnown RBP12.23□□□□□ -0.45
C4A-259ENST00000498271 ETDBQ3ZM63 59 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 ZCCHC24Q8N2G6 241 aaKnown RBP12.23□□□□□ -0.45
C4A-259ENST00000498271 DNAJC30Q96LL9 226 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 DENND4CQ5VZ89 1909 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 AZU1P20160 251 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 GNLYP22749 145 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 SRSF8Q9BRL6 282 aaKnown RBP12.23□□□□□ -0.45
C4A-259ENST00000498271 PRSS46E5RG02 174 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 OR11H6Q8NGC7 330 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 RASL10AQ92737 203 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 PYGO2Q9BRQ0 406 aa12.23□□□□□ -0.45
C4A-259ENST00000498271 IGHV2-70DA0A0C4DH43 119 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 LY6EQ16553 131 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 FAM104BQ5XKR9 115 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 SIGLEC15Q6ZMC9 328 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 ACACAQ13085 2346 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 SELLP14151 372 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 RNF114Q9Y508 228 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 C9orf139Q6ZV77 190 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 LINC00477Q96M19 166 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 CITED1Q99966 193 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 NUP210Q8TEM1 1887 aaPredicted RBP12.22□□□□□ -0.45
C4A-259ENST00000498271 MYMXA0A1B0GTQ4 84 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 K7ENP7 123 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 HIST1H4AP62805 103 aaKnown RBP12.22□□□□□ -0.45
C4A-259ENST00000498271 LINC01587Q99440 93 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 PROK2Q9HC23 129 aa12.22□□□□□ -0.45
C4A-259ENST00000498271 DPH3Q96FX2 82 aa12.21□□□□□ -0.45
C4A-259ENST00000498271 GPR179Q6PRD1 2367 aa12.21□□□□□ -0.45
C4A-259ENST00000498271 DOCK8Q8NF50 2099 aa12.21□□□□□ -0.45
C4A-259ENST00000498271 SNRNP200O75643 2136 aaKnown RBP12.21□□□□□ -0.45
C4A-259ENST00000498271 IGHV1-46P01743 117 aa12.21□□□□□ -0.45
C4A-259ENST00000498271 SPTBN2O15020 2390 aa12.21□□□□□ -0.45
C4A-259ENST00000498271 TRAV40A0A0B4J280 105 aa12.21□□□□□ -0.46
C4A-259ENST00000498271 Q8N8P6 123 aa12.21□□□□□ -0.46
C4A-259ENST00000498271 B4DSR2 109 aa12.21□□□□□ -0.46
C4A-259ENST00000498271 ARMS2P0C7Q2 107 aa12.21□□□□□ -0.46
C4A-259ENST00000498271 EFNA4P52798 201 aa12.21□□□□□ -0.46
C4A-259ENST00000498271 RPL15P61313 204 aaKnown RBP12.21□□□□□ -0.46
C4A-259ENST00000498271 DEFB125Q8N687 156 aa12.21□□□□□ -0.46
C4A-259ENST00000498271 SRD5A1P18405 259 aa12.2□□□□□ -0.46
C4A-259ENST00000498271 LHFPL4Q7Z7J7 247 aa12.2□□□□□ -0.46
C4A-259ENST00000498271 PHLDA1Q8WV24 401 aaPredicted RBP12.2□□□□□ -0.46
C4A-259ENST00000498271 FXYD7P58549 80 aa12.2□□□□□ -0.46
C4A-259ENST00000498271 IGHV3OR16-8A0A075B7F1 116 aa12.2□□□□□ -0.46
C4A-259ENST00000498271 H0YJW9 148 aa12.2□□□□□ -0.46
C4A-259ENST00000498271 MCRIP2Q9BUT9 160 aaKnown RBP12.2□□□□□ -0.46
C4A-259ENST00000498271 CD177Q8N6Q3 437 aa12.2□□□□□ -0.46
C4A-259ENST00000498271 WIPF2Q8TF74 440 aaPredicted RBP12.2□□□□□ -0.46
C4A-259ENST00000498271 ZNF688P0C7X2 276 aa12.19□□□□□ -0.46
C4A-259ENST00000498271 UTF1Q5T230 341 aa12.19□□□□□ -0.46
C4A-259ENST00000498271 SP5Q6BEB4 398 aaPredicted RBP12.19□□□□□ -0.46
C4A-259ENST00000498271 THBDP07204 575 aa12.19□□□□□ -0.46
C4A-259ENST00000498271 KLF5Q13887 457 aaPredicted RBP12.19□□□□□ -0.46
C4A-259ENST00000498271 TMEM141Q96I45 108 aa12.19□□□□□ -0.46
C4A-259ENST00000498271 HS3ST6Q96QI5 342 aa12.19□□□□□ -0.46
C4A-259ENST00000498271 CEND1Q8N111 149 aa12.19□□□□□ -0.46
C4A-259ENST00000498271 CSTL1Q9H114 145 aa12.19□□□□□ -0.46
C4A-259ENST00000498271 TRAV8-3A0A0A6YYJ7 113 aa12.19□□□□□ -0.46
C4A-259ENST00000498271 PAX8Q06710 450 aa12.19□□□□□ -0.46
C4A-259ENST00000498271 VGLL1Q99990 258 aa12.19□□□□□ -0.46
C4A-259ENST00000498271 OOSP1A8MZH6 123 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 C10orf55Q5SWW7 151 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 SHANK2-AS3Q9BTD1 123 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 IGHV3-64A0A075B6Q5 118 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 GAGE12JA6NER3 117 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 GAGE7O76087 117 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 GAGE12FP0CL80 117 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 GAGE12GP0CL81 117 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 GAGE12IP0CL82 117 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 GAGE4Q13068 117 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 COLCA1Q6ZS62 124 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 TIMM21Q9BVV7 248 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 CYYR1Q96J86 154 aa12.18□□□□□ -0.46
C4A-259ENST00000498271 IGKV3D-20A0A0C4DH25 116 aa12.17□□□□□ -0.46
C4A-259ENST00000498271 IGKV1-6A0A0C4DH72 117 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms