RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ZNF705GA8MUZ8 300 aaPredicted RBP8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 BOLA2-SMG1P6H3BVE0 249 aa8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 GOSR2O14653 212 aa8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 TSC22D2O75157 780 aa8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 H2AFB1P0C5Y9 115 aa8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 H2AFB2P0C5Z0 115 aa8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 HIST1H1AQ02539 215 aaPredicted RBP8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 PXDC1Q5TGL8 231 aa8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 TMEM88Q6PEY1 159 aa8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 TMEM256Q8N2U0 113 aa8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 C15orf53Q8NAA6 179 aa8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 UHRF2Q96PU4 802 aa8.34□□□□□ -1.07
NUDCD3-211ENST00000497978 HERC2O95714 4834 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 IGLV2-18A0A075B6J9 118 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 K7EPK0 472 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 CRXO43186 299 aaPredicted RBP8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 CCNKO75909 580 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 CXCL3P19876 107 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 TSPOP30536 169 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 SLC38A11Q08AI6 406 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 PSG3Q16557 428 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 SOHLH1Q5JUK2 328 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 ZNF546Q86UE3 836 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 BAP18Q8IXM2 172 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 ZBTB8BQ8NAP8 495 aaPredicted RBP8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 OR8A1Q8NGG7 326 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 LINC01587Q99440 93 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 GGACTQ9BVM4 153 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 ARV1Q9H2C2 271 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 DNAH6Q9C0G6 4158 aa8.33□□□□□ -1.08
NUDCD3-211ENST00000497978 TRAV12-2A0A075B6T6 113 aa8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 L7N2F9 121 aa8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 RTL8CO15255 209 aa8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 DEFB130BP0DP73 79 aa8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 DEFB130AP0DP74 79 aa8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 CXCL2P19875 107 aa8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 FAM3BP58499 235 aaPredicted RBP8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 VAMP2P63027 116 aa8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 ZNF846Q147U1 533 aa8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 PATE2Q6UY27 113 aa8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 MITD1Q8WV92 249 aa8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 SLC50A1Q9BRV3 221 aa8.32□□□□□ -1.08
NUDCD3-211ENST00000497978 A0A1B0GVY2 172 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 RGS13O14921 159 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 AGPAT2O15120 278 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 COX7A2P2O60397 106 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 PRM2P04554 102 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 IL7P13232 177 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 BTCP35070 178 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 TAS2R60P59551 318 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 RAB31Q13636 194 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 LCN15Q6UWW0 184 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 LINC00305Q7Z4B0 112 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 BPIFA4PQ86YQ2 179 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 RPUSD4Q96CM3 377 aaKnown RBP8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 SDHCQ99643 169 aaPredicted RBP8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 ATG101Q9BSB4 218 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 KRTAP17-1Q9BYP8 105 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 RCL1Q9Y2P8 373 aaKnown RBP8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 VPS13DQ5THJ4 4388 aa8.31□□□□□ -1.08
NUDCD3-211ENST00000497978 C7orf66A4D0T2 115 aa8.3□□□□□ -1.08
NUDCD3-211ENST00000497978 F5H768 121 aa8.3□□□□□ -1.08
NUDCD3-211ENST00000497978 MBPP02686 304 aaPredicted RBP8.3□□□□□ -1.08
NUDCD3-211ENST00000497978 HTN1P15515 57 aa8.3□□□□□ -1.08
NUDCD3-211ENST00000497978 AZU1P20160 251 aa8.3□□□□□ -1.08
NUDCD3-211ENST00000497978 CDKN1BP46527 198 aa8.3□□□□□ -1.08
NUDCD3-211ENST00000497978 BCAP31P51572 246 aa8.3□□□□□ -1.08
NUDCD3-211ENST00000497978 Q6ZR54 194 aa8.3□□□□□ -1.08
NUDCD3-211ENST00000497978 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
NUDCD3-211ENST00000497978 C20orf85Q9H1P6 137 aa8.3□□□□□ -1.08
NUDCD3-211ENST00000497978 CBY3A6NI87 242 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 FAM25EA8MYX2 175 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 MRPS12O15235 138 aaKnown RBP8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 ATP5G1P05496 136 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 ATP5G3P48201 142 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 ARL16Q0P5N6 197 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 C1orf134Q5TEV5 83 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 C10orf113Q5VZT2 155 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 ZNF493Q6ZR52 646 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 Q6ZRG5 221 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 OR10J6PQ8NGY7 276 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 MGST2Q99735 147 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 ZNF331Q9NQX6 463 aaPredicted RBP8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 LSM5Q9Y4Y9 91 aaKnown RBP8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 TIMM8BQ9Y5J9 83 aaPredicted RBP8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 PXMP4Q9Y6I8 212 aa8.29□□□□□ -1.08
NUDCD3-211ENST00000497978 PLAC8L1A1L4L8 177 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 C5orf51A6NDU8 294 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 H7BYZ3 331 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 CCSO14618 274 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 LYRM1O43325 122 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 NUDT3O95989 172 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 MED14OSP0DP75 135 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 PVALBP20472 110 aaPredicted RBP8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 CAMLGP49069 296 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 CAV2P51636 162 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 FCN2Q15485 313 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 C20orf144Q9BQM9 153 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 DNAJC4Q9NNZ3 241 aa8.28□□□□□ -1.08
NUDCD3-211ENST00000497978 HECTD4Q9Y4D8 3996 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms