RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 TWIST2Q8WVJ9 160 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 SLAMF6Q96DU3 332 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 TBL1YQ9BQ87 522 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 CHAC1Q9BUX1 264 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 EIF5A2Q9GZV4 153 aaKnown RBP2.98□□□□□ -1.93
SF3B1-212ENST00000496458 TCEAL2Q9H3H9 227 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-212ENST00000496458 MED29Q9NX70 200 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 SPANXCQ9NY87 97 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 SLC23A2Q9UGH3 650 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 ERG28Q9UKR5 140 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 MCTS1Q9ULC4 181 aaKnown RBP2.98□□□□□ -1.93
SF3B1-212ENST00000496458 WASHC3Q9Y3C0 194 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 NCOR2Q9Y618 2525 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 DMXL1Q9Y485 3027 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 TICRRQ7Z2Z1 1910 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 MYO15AQ9UKN7 3530 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 A0A0G2JMM0 328 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 FAM236DA0A1B0GTK5 79 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 A0A1W2PPB8 328 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 IGLC7A0M8Q6 106 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 ZNF705FA8MVS1 300 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-212ENST00000496458 KIR3DP1A8MWS1 328 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 LGALS9O00182 355 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 NRASP01111 189 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 IGHMP01871 453 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 HLA-DQB2P05538 268 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 ZNF705DP0CH99 300 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-212ENST00000496458 ZNF705BP0CI00 300 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-212ENST00000496458 SCGB1C2P0DMR2 95 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 IGLC2P0DOY2 106 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 IGLC3P0DOY3 106 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 FAM236CP0DP71 79 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 CTLA4P16410 223 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 RHOBP62745 196 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 SSBP1Q04837 148 aaKnown RBP2.97□□□□□ -1.93
SF3B1-212ENST00000496458 PLCXD2Q0VAA5 305 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 PDGFRLQ15198 375 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 TDRG1Q3Y452 100 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 AADACL3Q5VUY0 350 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 UNQ5815/PRO19632Q6UWF5 114 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 FA2HQ7L5A8 372 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 GKN2Q86XP6 184 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 OR8I2Q8N0Y5 310 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 ZNF567Q8N184 647 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 C5orf17Q8NAS9 161 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 OR5A1Q8NGJ0 315 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 OR8S1Q8NH09 359 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 SCGB1C1Q8TD33 95 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 TVP23CQ96ET8 276 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 ANAPC13Q9BS18 74 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 GGTLC1Q9BX51 225 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 ULBP3Q9BZM4 244 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 TMEM106BQ9NUM4 274 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 SS18L2Q9UHA2 77 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 LINC00527Q9UJ94 153 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 BOKQ9UMX3 212 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-212ENST00000496458 CCL26Q9Y258 94 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 RFNGQ9Y644 331 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 USP34Q70CQ2 3546 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 HELZP42694 1942 aaKnown RBP2.97□□□□□ -1.93
SF3B1-212ENST00000496458 PLXND1Q9Y4D7 1925 aa2.97□□□□□ -1.93
SF3B1-212ENST00000496458 NUP210Q8TEM1 1887 aaPredicted RBP2.96□□□□□ -1.93
SF3B1-212ENST00000496458 PATJQ8NI35 1801 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 ACACBO00763 2458 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 hADV38S2A0JD32 116 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 ZNF860A6NHJ4 632 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 A8MT66 165 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 H3BQ15 152 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 FGF6P10767 208 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 CCL1P22362 96 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 LPAR6P43657 344 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 HIST1H1AQ02539 215 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-212ENST00000496458 FOXF1Q12946 379 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 ZNF678Q5SXM1 525 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 TMEM78Q5T7P6 136 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 C12orf73Q69YU5 71 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 MRPL54Q6P161 138 aaKnown RBP2.96□□□□□ -1.94
SF3B1-212ENST00000496458 GUSBP11Q6P575 273 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 SLC25A34Q6PIV7 304 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 FOXI2Q6ZQN5 318 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 ATP5L2Q7Z4Y8 100 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 C1orf174Q8IYL3 243 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 ZNF439Q8NDP4 499 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 LY6G5BQ8NDX9 201 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 SLC25A44Q96H78 314 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-212ENST00000496458 AQP10Q96PS8 301 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 TBX5Q99593 518 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 TMEM126AQ9H061 195 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 DNAJC15Q9Y5T4 150 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 ANKRD11Q6UB99 2663 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-212ENST00000496458 PCNX2A6NKB5 2137 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 ASCC3Q8N3C0 2202 aaKnown RBP2.96□□□□□ -1.94
SF3B1-212ENST00000496458 EPG5Q9HCE0 2579 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 DOCK9Q9BZ29 2069 aa2.96□□□□□ -1.94
SF3B1-212ENST00000496458 DSPPQ9NZW4 1301 aa2.95□□□□□ -1.94
SF3B1-212ENST00000496458 PLXNB3Q9ULL4 1909 aa2.95□□□□□ -1.94
SF3B1-212ENST00000496458 THADAQ6YHU6 1953 aa2.95□□□□□ -1.94
SF3B1-212ENST00000496458 DOCK4Q8N1I0 1966 aa2.95□□□□□ -1.94
SF3B1-212ENST00000496458 IGLV1-50A0A075B6I6 118 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms